Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_A11
(927 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006608-6|AAF39753.1| 308|Caenorhabditis elegans Steroid alpha... 276 2e-74
U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical pr... 34 0.13
Z99266-1|CAB16464.1| 292|Caenorhabditis elegans F15C11.2 protein. 33 0.38
Z98262-3|CAD44156.1| 454|Caenorhabditis elegans Hypothetical pr... 33 0.38
Z98262-2|CAD44155.1| 484|Caenorhabditis elegans Hypothetical pr... 33 0.38
Z98262-1|CAB10932.1| 502|Caenorhabditis elegans Hypothetical pr... 33 0.38
Z71260-4|CAD44116.1| 454|Caenorhabditis elegans Hypothetical pr... 33 0.38
Z71260-3|CAD44115.1| 484|Caenorhabditis elegans Hypothetical pr... 33 0.38
Z71260-2|CAA95799.1| 502|Caenorhabditis elegans Hypothetical pr... 33 0.38
Z81119-1|CAB03331.1| 363|Caenorhabditis elegans Hypothetical pr... 29 3.6
U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z71178-13|CAF31498.1| 342|Caenorhabditis elegans Hypothetical p... 28 8.2
Z71178-11|CAA94885.2| 309|Caenorhabditis elegans Hypothetical p... 28 8.2
>AC006608-6|AAF39753.1| 308|Caenorhabditis elegans Steroid alpha
reductase familyprotein 1 protein.
Length = 308
Score = 276 bits (676), Expect = 2e-74
Identities = 132/242 (54%), Positives = 167/242 (69%), Gaps = 5/242 (2%)
Frame = +3
Query: 177 VTGESSIKNVKEKIQQSVKKSLYPDRQALKLEAKGKTLKDEDTLNSLNIQDGSK-LFLKD 353
++G +IK +K++I Q K L +RQAL++E KGK L D+ L+ L + L+++D
Sbjct: 23 ISGSETIKAIKKRIAQK-KLKLTEERQALRVEPKGKPLADDQKLSDLGLSSQKAVLYVRD 81
Query: 354 LGPQVSWRNVFLAEYAGPLFVYLWVYQRPWILYGTQT--SSPEQVATVAAICWSAHYAKR 527
LGPQ++W+ VF+AEYAGPLFVY Y RP +YG ++ +A WS HYAKR
Sbjct: 82 LGPQIAWKTVFMAEYAGPLFVYPLFYLRPTFIYGQAAVNATMHPAVQIAFFAWSFHYAKR 141
Query: 528 LFETLFIHRFSHGTMPLKNLFRNCAYYWLFALYVAYHVNHPLYTAPC--TTCYYIGLGGF 701
LFET FIHRF + TMP NL +NC+YYW FA +VAY VNHPL+T P Y GL GF
Sbjct: 142 LFETQFIHRFGNSTMPQFNLVKNCSYYWGFAAFVAYFVNHPLFTPPAFGDLQVYFGLAGF 201
Query: 702 VLCELGNLSIHILLKNLRPPGTKIRRIPKPDGNPFSLLLNFVSGPNYTYEFGSXLFFTIM 881
V+ E GNLSIHILL+NLRP GT+ RRIPKPDGNP SLL N+VS PNYTYE S +FF+IM
Sbjct: 202 VISEFGNLSIHILLRNLRPAGTRERRIPKPDGNPLSLLFNYVSCPNYTYEVASWIFFSIM 261
Query: 882 TK 887
+
Sbjct: 262 VQ 263
>U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical
protein C16C8.16 protein.
Length = 592
Score = 34.3 bits (75), Expect = 0.13
Identities = 19/60 (31%), Positives = 33/60 (55%)
Frame = +3
Query: 168 KIHVTGESSIKNVKEKIQQSVKKSLYPDRQALKLEAKGKTLKDEDTLNSLNIQDGSKLFL 347
K+ V G +I+++K +I K + R L+ GK L+D +L NIQ+G+ ++L
Sbjct: 209 KLRVCGSDTIRHIKLRINSLAKVDISSFRMVLR----GKLLEDHHSLAYYNIQEGALIWL 264
>Z99266-1|CAB16464.1| 292|Caenorhabditis elegans F15C11.2 protein.
Length = 292
Score = 32.7 bits (71), Expect = 0.38
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Frame = +3
Query: 126 EXEILSVSSAKPLGK--IHVTGESSIKNVKEKIQQSVKKSLYPDRQALKLEAKGKTLKDE 299
E ++ V P K + + ++S+ +K+K+ V + +++ + + GK LKDE
Sbjct: 4 ESALIKVHVKSPSNKYDVEIAADASVSELKDKVLVFVPTA---NKEQVCIIYTGKILKDE 60
Query: 300 DTLNSLNIQDGSKLFL 347
+TL I DG + L
Sbjct: 61 ETLTQHKIADGHTVHL 76
>Z98262-3|CAD44156.1| 454|Caenorhabditis elegans Hypothetical
protein F15C11.2c protein.
Length = 454
Score = 32.7 bits (71), Expect = 0.38
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Frame = +3
Query: 126 EXEILSVSSAKPLGK--IHVTGESSIKNVKEKIQQSVKKSLYPDRQALKLEAKGKTLKDE 299
E ++ V P K + + ++S+ +K+K+ V + +++ + + GK LKDE
Sbjct: 4 ESALIKVHVKSPSNKYDVEIAADASVSELKDKVLVFVPTA---NKEQVCIIYTGKILKDE 60
Query: 300 DTLNSLNIQDGSKLFL 347
+TL I DG + L
Sbjct: 61 ETLTQHKIADGHTVHL 76
>Z98262-2|CAD44155.1| 484|Caenorhabditis elegans Hypothetical
protein F15C11.2b protein.
Length = 484
Score = 32.7 bits (71), Expect = 0.38
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Frame = +3
Query: 126 EXEILSVSSAKPLGK--IHVTGESSIKNVKEKIQQSVKKSLYPDRQALKLEAKGKTLKDE 299
E ++ V P K + + ++S+ +K+K+ V + +++ + + GK LKDE
Sbjct: 4 ESALIKVHVKSPSNKYDVEIAADASVSELKDKVLVFVPTA---NKEQVCIIYTGKILKDE 60
Query: 300 DTLNSLNIQDGSKLFL 347
+TL I DG + L
Sbjct: 61 ETLTQHKIADGHTVHL 76
>Z98262-1|CAB10932.1| 502|Caenorhabditis elegans Hypothetical
protein F15C11.2a protein.
Length = 502
Score = 32.7 bits (71), Expect = 0.38
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Frame = +3
Query: 126 EXEILSVSSAKPLGK--IHVTGESSIKNVKEKIQQSVKKSLYPDRQALKLEAKGKTLKDE 299
E ++ V P K + + ++S+ +K+K+ V + +++ + + GK LKDE
Sbjct: 4 ESALIKVHVKSPSNKYDVEIAADASVSELKDKVLVFVPTA---NKEQVCIIYTGKILKDE 60
Query: 300 DTLNSLNIQDGSKLFL 347
+TL I DG + L
Sbjct: 61 ETLTQHKIADGHTVHL 76
>Z71260-4|CAD44116.1| 454|Caenorhabditis elegans Hypothetical
protein F15C11.2c protein.
Length = 454
Score = 32.7 bits (71), Expect = 0.38
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Frame = +3
Query: 126 EXEILSVSSAKPLGK--IHVTGESSIKNVKEKIQQSVKKSLYPDRQALKLEAKGKTLKDE 299
E ++ V P K + + ++S+ +K+K+ V + +++ + + GK LKDE
Sbjct: 4 ESALIKVHVKSPSNKYDVEIAADASVSELKDKVLVFVPTA---NKEQVCIIYTGKILKDE 60
Query: 300 DTLNSLNIQDGSKLFL 347
+TL I DG + L
Sbjct: 61 ETLTQHKIADGHTVHL 76
>Z71260-3|CAD44115.1| 484|Caenorhabditis elegans Hypothetical
protein F15C11.2b protein.
Length = 484
Score = 32.7 bits (71), Expect = 0.38
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Frame = +3
Query: 126 EXEILSVSSAKPLGK--IHVTGESSIKNVKEKIQQSVKKSLYPDRQALKLEAKGKTLKDE 299
E ++ V P K + + ++S+ +K+K+ V + +++ + + GK LKDE
Sbjct: 4 ESALIKVHVKSPSNKYDVEIAADASVSELKDKVLVFVPTA---NKEQVCIIYTGKILKDE 60
Query: 300 DTLNSLNIQDGSKLFL 347
+TL I DG + L
Sbjct: 61 ETLTQHKIADGHTVHL 76
>Z71260-2|CAA95799.1| 502|Caenorhabditis elegans Hypothetical
protein F15C11.2a protein.
Length = 502
Score = 32.7 bits (71), Expect = 0.38
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Frame = +3
Query: 126 EXEILSVSSAKPLGK--IHVTGESSIKNVKEKIQQSVKKSLYPDRQALKLEAKGKTLKDE 299
E ++ V P K + + ++S+ +K+K+ V + +++ + + GK LKDE
Sbjct: 4 ESALIKVHVKSPSNKYDVEIAADASVSELKDKVLVFVPTA---NKEQVCIIYTGKILKDE 60
Query: 300 DTLNSLNIQDGSKLFL 347
+TL I DG + L
Sbjct: 61 ETLTQHKIADGHTVHL 76
>Z81119-1|CAB03331.1| 363|Caenorhabditis elegans Hypothetical
protein T10H4.2 protein.
Length = 363
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = -2
Query: 257 LTIWV*RF--LHALLDFFFYILYRTFTCNVNLAERFRARYAQNFXLHIVLIS 108
+TIW + + +LL F+ Y + T + L +RF RY + L+I+ S
Sbjct: 95 VTIWCSFYAMMLSLLSIHFFYRYTSVTAPILLMKRFSCRYIFKYTLYILTFS 146
>U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical
protein C16C8.13 protein.
Length = 244
Score = 29.1 bits (62), Expect = 4.7
Identities = 20/57 (35%), Positives = 27/57 (47%)
Frame = +3
Query: 177 VTGESSIKNVKEKIQQSVKKSLYPDRQALKLEAKGKTLKDEDTLNSLNIQDGSKLFL 347
V G +I+ VK I + R L+ K L+D+ TL NIQ+GS L L
Sbjct: 189 VRGSDTIRQVKLTINSLANVDISSFRMVLR----DKVLEDDHTLAYYNIQEGSTLGL 241
>Z71178-13|CAF31498.1| 342|Caenorhabditis elegans Hypothetical
protein B0024.13b protein.
Length = 342
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = +3
Query: 489 VAAICWSAHYAKRLFETLFIHRFSHGTMPLKNLFRNCAYYWLFALYV 629
+A + S H A+RL+ET+F+ +S M L + +Y + + +
Sbjct: 157 LALLLISLHVARRLYETIFVSVYSDSRMNLFHYAVGIVHYIILPISI 203
>Z71178-11|CAA94885.2| 309|Caenorhabditis elegans Hypothetical
protein B0024.13a protein.
Length = 309
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = +3
Query: 489 VAAICWSAHYAKRLFETLFIHRFSHGTMPLKNLFRNCAYYWLFALYV 629
+A + S H A+RL+ET+F+ +S M L + +Y + + +
Sbjct: 124 LALLLISLHVARRLYETIFVSVYSDSRMNLFHYAVGIVHYIILPISI 170
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,640,866
Number of Sequences: 27780
Number of extensions: 494981
Number of successful extensions: 1281
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1278
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2381234086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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