Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_A09
(638 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49254-1|CAA89220.1| 153|Homo sapiens L23-related gene protein. 115 2e-25
U26596-1|AAC50415.1| 153|Homo sapiens ribosomal protein L23-rel... 115 2e-25
BC027710-1|AAH27710.1| 153|Homo sapiens mitochondrial ribosomal... 115 2e-25
BC052988-1|AAH52988.1| 980|Homo sapiens retinoic acid induced 1... 32 2.0
AY317139-1|AAP84319.1| 983|Homo sapiens RAI14 isoform protein. 32 2.0
AF155135-1|AAF44722.1| 980|Homo sapiens novel retinal pigment e... 32 2.0
AB037755-1|BAA92572.1| 989|Homo sapiens KIAA1334 protein protein. 32 2.0
D29677-1|BAA06147.2| 1943|Homo sapiens KIAA0054 protein. 31 2.6
BC130582-1|AAI30583.1| 1942|Homo sapiens helicase with zinc fing... 31 2.6
BC094881-1|AAH94881.1| 1163|Homo sapiens HELZ protein protein. 31 2.6
S95936-1|AAB22049.1| 698|Homo sapiens transferrin protein. 30 8.0
M12530-1|AAA61140.1| 698|Homo sapiens TF protein. 30 8.0
M12525-1|AAA61142.1| 277|Homo sapiens TF protein. 30 8.0
DQ923758-1|ABI97197.1| 698|Homo sapiens transferrin protein. 30 8.0
DQ525716-1|ABF47110.1| 698|Homo sapiens transferrin protein. 30 8.0
BC059367-1|AAH59367.1| 698|Homo sapiens transferrin protein. 30 8.0
AY308797-1|AAP45055.1| 698|Homo sapiens transferrin protein. 30 8.0
AK222755-1|BAD96475.1| 698|Homo sapiens transferrin variant pro... 30 8.0
AF288144-1|AAK77664.1| 698|Homo sapiens transferin protein. 30 8.0
>Z49254-1|CAA89220.1| 153|Homo sapiens L23-related gene protein.
Length = 153
Score = 115 bits (276), Expect = 2e-25
Identities = 63/147 (42%), Positives = 85/147 (57%), Gaps = 2/147 (1%)
Frame = +2
Query: 113 YPIYQRGNPQLRVFLPNFWMKLVRPHPKQLPNIVHFHCSMEMTKYDIKNYLEKIYEVPVV 292
YP+Y+ G PQLRVF NF+++LVRP Q + V F MEMT+ D++NYLE IY VPV
Sbjct: 7 YPLYRLGGPQLRVFRTNFFIQLVRPGVAQPEDTVQFRIPMEMTRVDLRNYLEGIYNVPVA 66
Query: 293 DVRTKINMGKFKKDVVKGYVIKEDDVKVAFVTLPKTMTFKYPDLF-EKSINEEEEHAKSL 469
VRT++ G K+ + IK+ D KVA+V L TF +PDLF EK + E A L
Sbjct: 67 AVRTRVQHGSNKRRDHRNVRIKKPDYKVAYVQLAHGQTFTFPDLFPEKDESPEGSAADDL 126
Query: 470 DESKKNFRKY-IDHNKSRPDIPSWFSI 547
+ R+ + R +PSWF +
Sbjct: 127 YSMLEEERQQRQSSDPRRGGVPSWFGL 153
>U26596-1|AAC50415.1| 153|Homo sapiens ribosomal protein
L23-related product protein.
Length = 153
Score = 115 bits (276), Expect = 2e-25
Identities = 63/147 (42%), Positives = 85/147 (57%), Gaps = 2/147 (1%)
Frame = +2
Query: 113 YPIYQRGNPQLRVFLPNFWMKLVRPHPKQLPNIVHFHCSMEMTKYDIKNYLEKIYEVPVV 292
YP+Y+ G PQLRVF NF+++LVRP Q + V F MEMT+ D++NYLE IY VPV
Sbjct: 7 YPLYRLGGPQLRVFRTNFFIQLVRPGVAQPEDTVQFRIPMEMTRVDLRNYLEGIYNVPVA 66
Query: 293 DVRTKINMGKFKKDVVKGYVIKEDDVKVAFVTLPKTMTFKYPDLF-EKSINEEEEHAKSL 469
VRT++ G K+ + IK+ D KVA+V L TF +PDLF EK + E A L
Sbjct: 67 AVRTRVQHGSNKRRDHRNVRIKKPDYKVAYVQLAHGQTFTFPDLFPEKDESPEGSAADDL 126
Query: 470 DESKKNFRKY-IDHNKSRPDIPSWFSI 547
+ R+ + R +PSWF +
Sbjct: 127 YSMLEEERQQRQSSDPRRGGVPSWFGL 153
>BC027710-1|AAH27710.1| 153|Homo sapiens mitochondrial ribosomal
protein L23 protein.
Length = 153
Score = 115 bits (276), Expect = 2e-25
Identities = 63/147 (42%), Positives = 85/147 (57%), Gaps = 2/147 (1%)
Frame = +2
Query: 113 YPIYQRGNPQLRVFLPNFWMKLVRPHPKQLPNIVHFHCSMEMTKYDIKNYLEKIYEVPVV 292
YP+Y+ G PQLRVF NF+++LVRP Q + V F MEMT+ D++NYLE IY VPV
Sbjct: 7 YPLYRLGGPQLRVFRTNFFIQLVRPGVAQPEDTVQFRIPMEMTRVDLRNYLEGIYNVPVA 66
Query: 293 DVRTKINMGKFKKDVVKGYVIKEDDVKVAFVTLPKTMTFKYPDLF-EKSINEEEEHAKSL 469
VRT++ G K+ + IK+ D KVA+V L TF +PDLF EK + E A L
Sbjct: 67 AVRTRVQHGSNKRRDHRNVRIKKPDYKVAYVQLAHGQTFTFPDLFPEKDESPEGSAADDL 126
Query: 470 DESKKNFRKY-IDHNKSRPDIPSWFSI 547
+ R+ + R +PSWF +
Sbjct: 127 YSMLEEERQQRQSSDPRRGGVPSWFGL 153
>BC052988-1|AAH52988.1| 980|Homo sapiens retinoic acid induced 14
protein.
Length = 980
Score = 31.9 bits (69), Expect = 2.0
Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 8/112 (7%)
Frame = +2
Query: 170 MKLVRPHPKQLPNIVHFHC------SMEMTKYDIKNYLEKIY--EVPVVDVRTKINMGKF 325
MKL P+ + N HFH + + K D++N LE+ + V ++ K+ + +
Sbjct: 506 MKLGLVSPESMDNYSHFHELRVTEEEINVLKQDLQNALEESERNKEKVRELEEKL-VERE 564
Query: 326 KKDVVKGYVIKEDDVKVAFVTLPKTMTFKYPDLFEKSINEEEEHAKSLDESK 481
K V+K V + +++K ++ ++ + M + LFEK +EE K D K
Sbjct: 565 KGTVIKPPVEEYEEMKSSYCSVIENMNKEKAFLFEKYQEAQEEIMKLKDTLK 616
>AY317139-1|AAP84319.1| 983|Homo sapiens RAI14 isoform protein.
Length = 983
Score = 31.9 bits (69), Expect = 2.0
Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 8/112 (7%)
Frame = +2
Query: 170 MKLVRPHPKQLPNIVHFHC------SMEMTKYDIKNYLEKIY--EVPVVDVRTKINMGKF 325
MKL P+ + N HFH + + K D++N LE+ + V ++ K+ + +
Sbjct: 509 MKLGLVSPESMDNYSHFHELRVTEEEINVLKQDLQNALEESERNKEKVRELEEKL-VERE 567
Query: 326 KKDVVKGYVIKEDDVKVAFVTLPKTMTFKYPDLFEKSINEEEEHAKSLDESK 481
K V+K V + +++K ++ ++ + M + LFEK +EE K D K
Sbjct: 568 KGTVIKPPVEEYEEMKSSYCSVIENMNKEKAFLFEKYQEAQEEIMKLKDTLK 619
>AF155135-1|AAF44722.1| 980|Homo sapiens novel retinal pigment
epithelial cell protein protein.
Length = 980
Score = 31.9 bits (69), Expect = 2.0
Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 8/112 (7%)
Frame = +2
Query: 170 MKLVRPHPKQLPNIVHFHC------SMEMTKYDIKNYLEKIY--EVPVVDVRTKINMGKF 325
MKL P+ + N HFH + + K D++N LE+ + V ++ K+ + +
Sbjct: 506 MKLGLVSPESMDNYSHFHELRVTEEEINVLKQDLQNALEESERNKEKVRELEEKL-VERE 564
Query: 326 KKDVVKGYVIKEDDVKVAFVTLPKTMTFKYPDLFEKSINEEEEHAKSLDESK 481
K V+K V + +++K ++ ++ + M + LFEK +EE K D K
Sbjct: 565 KGTVIKPPVEEYEEMKSSYCSVIENMNKEKAFLFEKYQEAQEEIMKLKDTLK 616
>AB037755-1|BAA92572.1| 989|Homo sapiens KIAA1334 protein protein.
Length = 989
Score = 31.9 bits (69), Expect = 2.0
Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 8/112 (7%)
Frame = +2
Query: 170 MKLVRPHPKQLPNIVHFHC------SMEMTKYDIKNYLEKIY--EVPVVDVRTKINMGKF 325
MKL P+ + N HFH + + K D++N LE+ + V ++ K+ + +
Sbjct: 515 MKLGLVSPESMDNYSHFHELRVTEEEINVLKQDLQNALEESERNKEKVRELEEKL-VERE 573
Query: 326 KKDVVKGYVIKEDDVKVAFVTLPKTMTFKYPDLFEKSINEEEEHAKSLDESK 481
K V+K V + +++K ++ ++ + M + LFEK +EE K D K
Sbjct: 574 KGTVIKPPVEEYEEMKSSYCSVIENMNKEKAFLFEKYQEAQEEIMKLKDTLK 625
>D29677-1|BAA06147.2| 1943|Homo sapiens KIAA0054 protein.
Length = 1943
Score = 31.5 bits (68), Expect = 2.6
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Frame = +2
Query: 113 YPIYQRGNPQ---LRVFLPNFWMKLVRPHPKQLPNIVHFHCSMEM-TKYDI 253
+P + GNPQ LRV+ N W+K V P Q I H + +M K DI
Sbjct: 713 HPYVEAGNPQARPLRVYFRNRWVKTVHPVVHQYCLISSAHSTFQMPQKEDI 763
>BC130582-1|AAI30583.1| 1942|Homo sapiens helicase with zinc finger
protein.
Length = 1942
Score = 31.5 bits (68), Expect = 2.6
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Frame = +2
Query: 113 YPIYQRGNPQ---LRVFLPNFWMKLVRPHPKQLPNIVHFHCSMEM-TKYDI 253
+P + GNPQ LRV+ N W+K V P Q I H + +M K DI
Sbjct: 712 HPYVEAGNPQARPLRVYFRNRWVKTVHPVVHQYCLISSAHSTFQMPQKEDI 762
>BC094881-1|AAH94881.1| 1163|Homo sapiens HELZ protein protein.
Length = 1163
Score = 31.5 bits (68), Expect = 2.6
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Frame = +2
Query: 113 YPIYQRGNPQ---LRVFLPNFWMKLVRPHPKQLPNIVHFHCSMEM-TKYDI 253
+P + GNPQ LRV+ N W+K V P Q I H + +M K DI
Sbjct: 713 HPYVEAGNPQARPLRVYFRNRWVKTVHPVVHQYCLISSAHSTFQMPQKEDI 763
>S95936-1|AAB22049.1| 698|Homo sapiens transferrin protein.
Length = 698
Score = 29.9 bits (64), Expect = 8.0
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +2
Query: 350 VIKEDDVKVAFVTLPKTMTFKYPDLFEKSINEEEEHAKSLDESKKNFRKYIDHNKSR 520
V K D V T+P+ K PD + K++NE++ LD ++K +Y + + +R
Sbjct: 544 VEKGDVAFVKHQTVPQNTGGKNPDPWAKNLNEKDYELLCLDGTRKPVEEYANCHLAR 600
>M12530-1|AAA61140.1| 698|Homo sapiens TF protein.
Length = 698
Score = 29.9 bits (64), Expect = 8.0
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +2
Query: 350 VIKEDDVKVAFVTLPKTMTFKYPDLFEKSINEEEEHAKSLDESKKNFRKYIDHNKSR 520
V K D V T+P+ K PD + K++NE++ LD ++K +Y + + +R
Sbjct: 544 VEKGDVAFVKHQTVPQNTGGKNPDPWAKNLNEKDYELLCLDGTRKPVEEYANCHLAR 600
>M12525-1|AAA61142.1| 277|Homo sapiens TF protein.
Length = 277
Score = 29.9 bits (64), Expect = 8.0
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +2
Query: 350 VIKEDDVKVAFVTLPKTMTFKYPDLFEKSINEEEEHAKSLDESKKNFRKYIDHNKSR 520
V K D V T+P+ K PD + K++NE++ LD ++K +Y + + +R
Sbjct: 123 VEKGDVAFVKHQTVPQNTGGKNPDPWAKNLNEKDYELLCLDGTRKPVEEYANCHLAR 179
>DQ923758-1|ABI97197.1| 698|Homo sapiens transferrin protein.
Length = 698
Score = 29.9 bits (64), Expect = 8.0
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +2
Query: 350 VIKEDDVKVAFVTLPKTMTFKYPDLFEKSINEEEEHAKSLDESKKNFRKYIDHNKSR 520
V K D V T+P+ K PD + K++NE++ LD ++K +Y + + +R
Sbjct: 544 VEKGDVAFVKHQTVPQNTGGKNPDPWAKNLNEKDYELLCLDGTRKPVEEYANCHLAR 600
>DQ525716-1|ABF47110.1| 698|Homo sapiens transferrin protein.
Length = 698
Score = 29.9 bits (64), Expect = 8.0
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +2
Query: 350 VIKEDDVKVAFVTLPKTMTFKYPDLFEKSINEEEEHAKSLDESKKNFRKYIDHNKSR 520
V K D V T+P+ K PD + K++NE++ LD ++K +Y + + +R
Sbjct: 544 VEKGDVAFVKHQTVPQNTGGKNPDPWAKNLNEKDYELLCLDGTRKPVEEYANCHLAR 600
>BC059367-1|AAH59367.1| 698|Homo sapiens transferrin protein.
Length = 698
Score = 29.9 bits (64), Expect = 8.0
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +2
Query: 350 VIKEDDVKVAFVTLPKTMTFKYPDLFEKSINEEEEHAKSLDESKKNFRKYIDHNKSR 520
V K D V T+P+ K PD + K++NE++ LD ++K +Y + + +R
Sbjct: 544 VEKGDVAFVKHQTVPQNTGGKNPDPWAKNLNEKDYELLCLDGTRKPVEEYANCHLAR 600
>AY308797-1|AAP45055.1| 698|Homo sapiens transferrin protein.
Length = 698
Score = 29.9 bits (64), Expect = 8.0
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +2
Query: 350 VIKEDDVKVAFVTLPKTMTFKYPDLFEKSINEEEEHAKSLDESKKNFRKYIDHNKSR 520
V K D V T+P+ K PD + K++NE++ LD ++K +Y + + +R
Sbjct: 544 VEKGDVAFVKHQTVPQNTGGKNPDPWAKNLNEKDYELLCLDGTRKPVEEYANCHLAR 600
>AK222755-1|BAD96475.1| 698|Homo sapiens transferrin variant
protein.
Length = 698
Score = 29.9 bits (64), Expect = 8.0
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +2
Query: 350 VIKEDDVKVAFVTLPKTMTFKYPDLFEKSINEEEEHAKSLDESKKNFRKYIDHNKSR 520
V K D V T+P+ K PD + K++NE++ LD ++K +Y + + +R
Sbjct: 544 VEKGDVAFVKHQTVPQNTGGKNPDPWAKNLNEKDYELLCLDGTRKPVEEYANCHLAR 600
>AF288144-1|AAK77664.1| 698|Homo sapiens transferin protein.
Length = 698
Score = 29.9 bits (64), Expect = 8.0
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +2
Query: 350 VIKEDDVKVAFVTLPKTMTFKYPDLFEKSINEEEEHAKSLDESKKNFRKYIDHNKSR 520
V K D V T+P+ K PD + K++NE++ LD ++K +Y + + +R
Sbjct: 544 VEKGDVAFVKHQTVPQNTGGKNPDPWAKNLNEKDYELLCLDGTRKPVEEYANCHLAR 600
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,249,890
Number of Sequences: 237096
Number of extensions: 1404957
Number of successful extensions: 2407
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 2353
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2407
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7028963750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -