Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_A08
(877 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_04_0162 + 17858802-17861168 32 0.52
12_01_0750 - 6754126-6755248,6755331-6755791 31 0.92
02_05_0796 + 31800256-31800528,31800635-31800758,31802642-318027... 31 1.2
01_06_1402 + 37052996-37053449,37053533-37053630,37053718-370538... 31 1.2
06_03_1515 - 30707600-30707613,30708093-30708167,30708596-307086... 30 2.1
06_01_0760 - 5676973-5677830 25 2.7
06_03_0874 - 25580417-25580419,25580504-25580604,25580828-255814... 30 2.8
03_06_0074 - 31476094-31476215,31477803-31478238,31478438-314784... 30 2.8
09_04_0180 + 15367737-15367755,15368874-15369739 29 3.7
08_02_1040 - 23873354-23874509,23875645-23875796 29 3.7
07_03_1203 - 24848342-24848885,24849199-24849204,24849648-248499... 29 3.7
02_05_0894 - 32585640-32585672,32585939-32585967,32586937-32588443 29 3.7
09_02_0495 + 9880714-9881196 29 4.9
08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,322... 29 4.9
06_01_0437 + 3101449-3101521,3101872-3102232,3103766-3103958,310... 29 4.9
05_04_0139 + 18355597-18355696,18356665-18356778,18357118-183572... 29 4.9
05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287... 29 4.9
01_07_0139 - 41385823-41386656 29 4.9
01_06_1341 - 36434098-36436080 29 4.9
01_05_0490 + 22672241-22674679 29 4.9
09_06_0264 - 21929086-21931368 29 6.5
09_04_0430 + 17502387-17503505 29 6.5
11_06_0610 - 25449085-25453284 28 8.5
09_02_0113 + 4408171-4409415,4409902-4409907 28 8.5
07_01_0674 + 5047503-5047646,5047808-5047901,5048743-5048828,504... 28 8.5
04_04_0872 + 28903099-28903644,28903739-28904544,28904620-28905004 28 8.5
01_06_0789 - 32010131-32010330,32010438-32010866,32011658-320117... 28 8.5
01_03_0059 + 12109301-12109330,12109465-12109587,12109663-12110112 28 8.5
>03_04_0162 + 17858802-17861168
Length = 788
Score = 32.3 bits (70), Expect = 0.52
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 703 SDGEVGPQVVPEARLQLPTHTAQVEEASPQATPPP 807
S G++ +PEA+L PT T + +S A PPP
Sbjct: 664 SCGKLDKNKIPEAQLNYPTITVPLPRSSSSAAPPP 698
>12_01_0750 - 6754126-6755248,6755331-6755791
Length = 527
Score = 31.5 bits (68), Expect = 0.92
Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = -2
Query: 462 PARSLEWG*RSGSLVAEGNRLRFLVAVR-SW-YRQGSGGDDQVCTPGPLKAP 313
P L W S A G R F+VA R +W +R+G GD C G L P
Sbjct: 212 PREFLRWLTSQPSWAALGGRDHFMVAARTTWMFRRGGAGDSLGCGNGFLSRP 263
>02_05_0796 +
31800256-31800528,31800635-31800758,31802642-31802771,
31804336-31804414,31804848-31805133,31805273-31805385
Length = 334
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +1
Query: 661 PHPECLHPPSFQCSSDG-EVGPQVVPEARLQLPTH--TAQVEEASPQATPPP 807
P P + P+ Q GP + P+ RLQLP H + Q +E + + PP
Sbjct: 253 PRPPFIQQPALQFDGGSFPPGPSLPPDFRLQLPPHALSRQPDETTGAQSAPP 304
>01_06_1402 +
37052996-37053449,37053533-37053630,37053718-37053888,
37054017-37054117,37054928-37055063,37055155-37055205,
37055311-37055598,37055896-37056130,37056408-37056523,
37057300-37057496,37057739-37057745
Length = 617
Score = 31.1 bits (67), Expect = 1.2
Identities = 20/51 (39%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +1
Query: 682 PPSFQCSSDGEVGPQVVPEARLQLPTHTAQVE-EASPQATPPPTVDPDRTK 831
P + SD E GP P + L P A EA PQ PPP P RT+
Sbjct: 60 PRPAEAPSDLESGPPARPNSALPPPPAAAAANAEAKPQPPPPP--PPARTR 108
>06_03_1515 -
30707600-30707613,30708093-30708167,30708596-30708647,
30708751-30708831,30709145-30709219,30709870-30709977,
30710026-30710032,30710133-30710268,30710361-30710685
Length = 290
Score = 30.3 bits (65), Expect = 2.1
Identities = 18/63 (28%), Positives = 27/63 (42%)
Frame = +1
Query: 268 AVAWPRSCTASPKPHRRLQRARCTYLIVAARPLPIPATYRNKKTKSITLSNQRTRSSAPL 447
AV PR + SP P R R + + RP P P + ++L+ R+R +P
Sbjct: 7 AVPKPRFVSPSPSPAVAATRRRLRFPLAPPRPRPPPLRWSPPSPFRLSLTLSRSRRHSPP 66
Query: 448 KRP 456
P
Sbjct: 67 PPP 69
>06_01_0760 - 5676973-5677830
Length = 285
Score = 25.0 bits (52), Expect(2) = 2.7
Identities = 11/30 (36%), Positives = 13/30 (43%)
Frame = +3
Query: 192 GSGDSNRGGLVMSRYYNPYYNPRAVGGGMA 281
GSG + G + Y PYY P G A
Sbjct: 171 GSGSGSGSGYGQAGGYGPYYGPYGGSGAYA 200
Score = 23.4 bits (48), Expect(2) = 2.7
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +3
Query: 141 QAYPYNPYYGNVDSLSYGSGDSNRGG 218
QA Y PY GN + G G GG
Sbjct: 140 QAGGYGPYGGNAYAQGGGQGGGGGGG 165
>06_03_0874 -
25580417-25580419,25580504-25580604,25580828-25581411,
25581523-25581594,25581667-25581793,25583412-25583516,
25583643-25583676
Length = 341
Score = 29.9 bits (64), Expect = 2.8
Identities = 18/70 (25%), Positives = 27/70 (38%)
Frame = +3
Query: 282 AFMYRQPEAAQAPSTGQVYIPDRRRQTLADTSYVPQQENEVYYPQQPENPIFSPTQATEL 461
+ + R E A P T Y P +Y PQ + E Y P QP+ + P +
Sbjct: 209 SLLARDVEHAAYPPTSTTYPPQPYPPQPQGQTYPPQPQGETYQP-QPQRETYPPQPQVQP 267
Query: 462 ADPTEKVELY 491
P + + Y
Sbjct: 268 YPPKPQGQPY 277
>03_06_0074 -
31476094-31476215,31477803-31478238,31478438-31478485,
31478569-31479018,31479567-31479681,31480052-31480905
Length = 674
Score = 29.9 bits (64), Expect = 2.8
Identities = 17/52 (32%), Positives = 22/52 (42%)
Frame = +2
Query: 293 PPARSRTGAFNGPGVHT*SSPPDPCRYQLRTATRKRSLLPSATREPDLQPHS 448
PP R PG+ T P TAT KR+ P++T P PH+
Sbjct: 43 PPLPPRRSPQKRPGLPTIPENGPPAGMATATATPKRTRTPTSTCAPPPPPHA 94
>09_04_0180 + 15367737-15367755,15368874-15369739
Length = 294
Score = 29.5 bits (63), Expect = 3.7
Identities = 15/61 (24%), Positives = 24/61 (39%)
Frame = +1
Query: 661 PHPECLHPPSFQCSSDGEVGPQVVPEARLQLPTHTAQVEEASPQATPPPTVDPDRTKNCK 840
P P P D E+ P+ P + +PT + + P+ P P DP+ +
Sbjct: 109 PKPGLDPEPDTNVEPDLELEPEPPPPRPMPIPTPSPRPRPPDPEPKPDPEPDPELEPEPE 168
Query: 841 P 843
P
Sbjct: 169 P 169
>08_02_1040 - 23873354-23874509,23875645-23875796
Length = 435
Score = 29.5 bits (63), Expect = 3.7
Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = +1
Query: 142 KRIPTIPTMETWTPFPTARATVTEEAWS*AVTIILTTTPELWAVAWPRSCTASPKPHRRL 321
+R P IP+ +W P ARA +T W + T + + + A A + A+P P
Sbjct: 299 RRFP-IPSAASWLGVPVARARMTALRWVRSSTALRGNSSDAAAAA---AAAAAPSPSSAS 354
Query: 322 QR-ARCTYLIVAARPLPIP 375
T+L A PL P
Sbjct: 355 STPTSSTFLEEMALPLAAP 373
>07_03_1203 -
24848342-24848885,24849199-24849204,24849648-24849947,
24852725-24853047,24853076-24853255
Length = 450
Score = 29.5 bits (63), Expect = 3.7
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 6/64 (9%)
Frame = +1
Query: 151 PTIPTMETWTPFPTARATVTEEAWS*AVTIILTTTPELW------AVAWPRSCTASPKPH 312
PT M T +P A++TE+ + I T +L A W R C A PH
Sbjct: 137 PTPRLMSTHASYPNLPASITEDDRCKIIYICRGTKEKLLGGLVPTARRWRRYCGAGRGPH 196
Query: 313 RRLQ 324
RRL+
Sbjct: 197 RRLR 200
>02_05_0894 - 32585640-32585672,32585939-32585967,32586937-32588443
Length = 522
Score = 29.5 bits (63), Expect = 3.7
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Frame = +3
Query: 90 IMKVMYAFVMMSCA-LLVQAYPYNPYYGNVD--SLSYGSGDSNRGGL 221
+MK M F+ + + L+V AYP+ Y GN D SL Y N G L
Sbjct: 209 VMKPMLDFLAQTGSYLMVNAYPFFAYSGNADVISLDYALFRPNAGVL 255
>09_02_0495 + 9880714-9881196
Length = 160
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = +3
Query: 138 VQAYPYNPYYGNVDSLSYGSGDSNRGGLVMSRYYNP 245
V +YP P G+ S S G GD GGL Y P
Sbjct: 47 VNSYPPPPPAGSSSSSSSGGGDGGAGGLFGGTYPPP 82
>08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,
3220080-3223195,3223303-3223561,3223665-3223951,
3224029-3224364,3224463-3224604,3224690-3224910,
3224990-3225151,3225242-3225400,3225488-3225787,
3226306-3226569,3227370-3227453
Length = 1855
Score = 29.1 bits (62), Expect = 4.9
Identities = 23/82 (28%), Positives = 32/82 (39%), Gaps = 4/82 (4%)
Frame = +3
Query: 213 GGLVMSRYYNPYYNPRAVGGGMAAFMYRQPEAAQAPSTGQVYIPDRRRQTLADTSYVPQQ 392
GG+ S +P Y P + GG + P +P T Y P + SY P
Sbjct: 1531 GGMAFSPVPSPGYTPSSGGGYSPSSPVYSPGPGYSP-TSPSYSPASPSYSPTSPSYTP-- 1587
Query: 393 ENEVYYPQQPE----NPIFSPT 446
+ Y P P +P +SPT
Sbjct: 1588 GSPTYSPTSPSYSPTSPSYSPT 1609
>06_01_0437 +
3101449-3101521,3101872-3102232,3103766-3103958,
3104051-3104848,3104997-3105143,3106024-3106377
Length = 641
Score = 29.1 bits (62), Expect = 4.9
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -3
Query: 824 RSGSTVGGGVACGDASSTCAVCVGNCSR 741
++G ++G GD S C+V VG C R
Sbjct: 71 KAGRSLGSASGGGDCSLVCSVLVGGCGR 98
>05_04_0139 +
18355597-18355696,18356665-18356778,18357118-18357263,
18357365-18357910,18358397-18358600
Length = 369
Score = 29.1 bits (62), Expect = 4.9
Identities = 23/53 (43%), Positives = 26/53 (49%)
Frame = -2
Query: 504 PEWLSTVRPFQWGQPARSLEWG*RSGSLVAEGNRLRFLVAVRSWYRQGSGGDD 346
P+ L VR A SLE S SL + R RFLV + S YR G GG D
Sbjct: 165 PDHLVAVRKAYRAAYASSLEEDVASCSLFGDPLR-RFLVRLVSSYRYGGGGVD 216
>05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,
2879715-2879973,2880060-2880346,2880423-2880758,
2880862-2881003,2881077-2881297,2881379-2881540,
2881617-2881775,2881860-2882159,2882834-2883097,
2883133-2883243,2883902-2883988
Length = 1871
Score = 29.1 bits (62), Expect = 4.9
Identities = 20/78 (25%), Positives = 30/78 (38%)
Frame = +3
Query: 240 NPYYNPRAVGGGMAAFMYRQPEAAQAPSTGQVYIPDRRRQTLADTSYVPQQENEVYYPQQ 419
+P Y+P + + Y +P T VY P + SY P + Y
Sbjct: 1652 SPIYSPSSPIYSPTSLSYSPTSPVYSP-TSPVYNPTSSAYSPTSPSYNPTSPS---YSYS 1707
Query: 420 PENPIFSPTQATELADPT 473
P +P +SPT + PT
Sbjct: 1708 PTSPSYSPTSPSYSYSPT 1725
>01_07_0139 - 41385823-41386656
Length = 277
Score = 29.1 bits (62), Expect = 4.9
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = -3
Query: 824 RSGSTVGGGVACGDASSTCAVCVGNCSRASGTTCGPTSPSEEHWKEGGCRHSGWG 660
R S G C A++TC+ C+G C+ A G SP W+ G R S WG
Sbjct: 228 RGRSARGSPSWCRSAAATCSWCLG-CTSARGR----GSP----WRTSGRRPSWWG 273
>01_06_1341 - 36434098-36436080
Length = 660
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = +1
Query: 295 ASPKPHRRLQRARCTYLIVAARPLPIPATYRNKKTKSITLSNQRTRSSAPLK 450
A P+ R+ R+RC + + P P PA N +++ S + R++A L+
Sbjct: 21 AGPRARPRVSRSRCVASLASQPPTPPPAN-ANHLVQTLCASGRLARAAALLQ 71
>01_05_0490 + 22672241-22674679
Length = 812
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +1
Query: 742 RLQLPTHTAQVEEASPQATPPPTVDPDR 825
RL +VEE +P ATPPP P R
Sbjct: 446 RLDAVLEEMRVEEVAPAATPPPPARPRR 473
>09_06_0264 - 21929086-21931368
Length = 760
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +3
Query: 357 QTLADTSYVPQQENEVYYPQQPENPIFSPTQATELADPTEKV 482
+TLAD +P+ E E +P++ +SP+Q +PT V
Sbjct: 699 KTLADKLQMPEPEPEPEREPEPKSGPYSPSQEIVQGEPTATV 740
>09_04_0430 + 17502387-17503505
Length = 372
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/57 (26%), Positives = 21/57 (36%)
Frame = +1
Query: 679 HPPSFQCSSDGEVGPQVVPEARLQLPTHTAQVEEASPQATPPPTVDPDRTKNCKPXT 849
HPP+ + PQ P LPT +++P P + P R P T
Sbjct: 158 HPPAPMQQPQPQPPPQPTPPRAAPLPTPPRAPPQSTPPRAAPQSTPPQRVAPQPPAT 214
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 28.3 bits (60), Expect = 8.5
Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 4/53 (7%)
Frame = +1
Query: 661 PHPECLHPPSFQCSSDG----EVGPQVVPEARLQLPTHTAQVEEASPQATPPP 807
P PE PPS S E P P + P+H V + ++TPPP
Sbjct: 891 PPPEGKSPPSHTPESSSPPSKESEPPPTPTPKSSPPSHEEYVPPSPAKSTPPP 943
>09_02_0113 + 4408171-4409415,4409902-4409907
Length = 416
Score = 28.3 bits (60), Expect = 8.5
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = -3
Query: 755 GNCS-RASGTTCGPTSPSEEHWKEGGCRHSGWGEVVFFFVFLNRPLRLFP 609
G CS RA G T + +W EG C H+ G++ + R L+L P
Sbjct: 217 GECSWRALPRDTGVTVAFDPYWFEGRCVHAA-GDIYWHICHSGRLLKLDP 265
>07_01_0674 +
5047503-5047646,5047808-5047901,5048743-5048828,
5049380-5049429,5049517-5049586,5049668-5049749,
5049867-5050267,5050414-5050941,5051823-5052044
Length = 558
Score = 28.3 bits (60), Expect = 8.5
Identities = 15/61 (24%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
Frame = +1
Query: 664 HPECLHPPSFQCSSDGEVGPQV-VPEARLQLPTHTAQVEEASPQATPPPTVDPDRTKNCK 840
+P PP +GP++ +P + + EEA P PPP P + +
Sbjct: 158 NPSGAPPPGKPPMYKSSIGPRIPLPSSSAGASSSMPGTEEAGPSTLPPPPPPPPLPASSE 217
Query: 841 P 843
P
Sbjct: 218 P 218
>04_04_0872 + 28903099-28903644,28903739-28904544,28904620-28905004
Length = 578
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/23 (56%), Positives = 17/23 (73%), Gaps = 2/23 (8%)
Frame = +2
Query: 383 TATRKRSLLPSATREPDLQ--PH 445
T +++ SLLPS REPDL+ PH
Sbjct: 123 TLSKQNSLLPSRIREPDLELPPH 145
>01_06_0789 -
32010131-32010330,32010438-32010866,32011658-32011752,
32011836-32011933,32012586-32012942,32013615-32013792,
32013856-32013936,32014441-32014548,32014916-32015178
Length = 602
Score = 28.3 bits (60), Expect = 8.5
Identities = 17/60 (28%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Frame = +1
Query: 667 PECLHPPSFQCSSDGEVGPQVVPEARLQLPTHTAQVEEASPQATP-PPTVDPDRTKNCKP 843
P+ LHP V +P + + QV A PQ P PP P + ++ KP
Sbjct: 36 PQQLHPRGLPVMRSHHVVHVPLPRPAVAVAVPVPQVRPAQPQPVPRPPVAVPLKPESPKP 95
>01_03_0059 + 12109301-12109330,12109465-12109587,12109663-12110112
Length = 200
Score = 28.3 bits (60), Expect = 8.5
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = -2
Query: 378 SWYRQGSGGDDQVCTPGPLKAPVRLRAGG 292
SWY GSG V P APV + AGG
Sbjct: 132 SWYASGSGVGRMVQVPAIDAAPVCIAAGG 160
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,606,195
Number of Sequences: 37544
Number of extensions: 557251
Number of successful extensions: 2332
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 2149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2310
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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