Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_A08
(877 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003130-1|AAB54124.2| 423|Caenorhabditis elegans Hypothetical ... 37 0.022
Z74032-2|CAA98466.2| 248|Caenorhabditis elegans Hypothetical pr... 35 0.066
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 32 0.47
Z83223-4|CAB05716.2| 534|Caenorhabditis elegans Hypothetical pr... 31 0.82
Z74043-5|CAA98544.1| 588|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.4
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 30 1.9
L29440-1|AAA98752.1| 570|Caenorhabditis elegans endoprotease pr... 30 1.9
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 30 1.9
AF039719-1|AAB96754.1| 942|Caenorhabditis elegans Blistered cut... 30 1.9
AC006696-8|AAF39989.1| 120|Caenorhabditis elegans Hypothetical ... 30 1.9
Z49908-11|CAA90104.2| 355|Caenorhabditis elegans Hypothetical p... 29 3.3
Z49070-5|CAA88872.2| 355|Caenorhabditis elegans Hypothetical pr... 29 3.3
U80453-11|AAN63452.2| 503|Caenorhabditis elegans Hypothetical p... 29 3.3
U80453-10|AAN63453.1| 489|Caenorhabditis elegans Hypothetical p... 29 3.3
U80453-9|AAT81206.1| 432|Caenorhabditis elegans Hypothetical pr... 29 3.3
AL132862-12|CAB60542.1| 380|Caenorhabditis elegans Hypothetical... 29 3.3
Z74046-1|CAA98556.2| 178|Caenorhabditis elegans Hypothetical pr... 29 5.8
U97196-12|AAB52456.2| 564|Caenorhabditis elegans Hypothetical p... 29 5.8
AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical ... 29 5.8
AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical ... 29 5.8
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 29 5.8
Z98853-7|CAB57906.1| 1675|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z75530-10|CAA99796.2| 1675|Caenorhabditis elegans Hypothetical p... 28 7.6
Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical pr... 28 7.6
L13200-7|AAA28189.1| 206|Caenorhabditis elegans Prion-like-(q/n... 28 7.6
AL032625-4|CAB63350.2| 792|Caenorhabditis elegans Hypothetical ... 28 7.6
>AF003130-1|AAB54124.2| 423|Caenorhabditis elegans Hypothetical
protein F55A12.6 protein.
Length = 423
Score = 36.7 bits (81), Expect = 0.022
Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +3
Query: 147 YPYNPYYGNVDSLSYGSGDSNR--GGLVMSRYYNPYYN-PRAVGGGMAAFMYRQPEA 308
Y N YYGN YG+G N+ GG + YYN YYN GG + Y Q ++
Sbjct: 138 YYGNGYYGNGYGNGYGNGYYNQYNGGYGGNGYYNQYYNGNNYYGGNRGYYNYNQGQS 194
>Z74032-2|CAA98466.2| 248|Caenorhabditis elegans Hypothetical
protein F35B12.3 protein.
Length = 248
Score = 35.1 bits (77), Expect = 0.066
Identities = 31/113 (27%), Positives = 46/113 (40%), Gaps = 3/113 (2%)
Frame = +3
Query: 114 VMMSCALLVQAYPYNPYYGNVDSLSYGSGDSNRGGLVMSRYYNPYY-NPRAVGG--GMAA 284
+++SC +L AYPY+ YGN D Y Y Y NP GG G
Sbjct: 7 LVVSCGILAAAYPYSQQYGNYDQ-QYSQQSQYYPSSGQQGYRGGYQSNPGMQGGYQGNGQ 65
Query: 285 FMYRQPEAAQAPSTGQVYIPDRRRQTLADTSYVPQQENEVYYPQQPENPIFSP 443
Y+ + Q GQ R Q Y Q ++ YP++ ++ ++SP
Sbjct: 66 DSYQDFQGYQGYQRGQG--GQRGYQ-----GYQSNQRSQGSYPERYDSSMYSP 111
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 32.3 bits (70), Expect = 0.47
Identities = 27/115 (23%), Positives = 37/115 (32%), Gaps = 2/115 (1%)
Frame = +1
Query: 154 TIPTMETWTPFPTARATVTEEAWS*AVTIILT--TTPELWAVAWPRSCTASPKPHRRLQR 327
T+PT T TP T T T + T T TT P + T +
Sbjct: 215 TVPTTTTTTPTTTTTTTTTPTTTTTTPTTTTTPATTTSETTTTTPTTTTQTTTKPTTTTT 274
Query: 328 ARCTYLIVAARPLPIPATYRNKKTKSITLSNQRTRSSAPLKRPSWLTPLKRSNCT 492
T P T + K+ + T +T S+ + TP S CT
Sbjct: 275 TPTTTPTTTTTPTTTTTTAKTTKSTTTTTKTTKTTSTPTTTTTTPKTPFDTSKCT 329
>Z83223-4|CAB05716.2| 534|Caenorhabditis elegans Hypothetical
protein E01G4.4 protein.
Length = 534
Score = 31.5 bits (68), Expect = 0.82
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +3
Query: 246 YYNPRAVGGGMAAFMYRQPEAAQAPSTGQVYIPDRRRQTLADTSYVPQQENEVYYPQQPE 425
Y NP+A G + +Q + P Y P R++Q +Y P+Q+ + Y QQ +
Sbjct: 27 YQNPQAGYG----YNNQQQQQQGRPQQYAGYPPQRQQQQYNMNAYAPRQQQQQQYQQQQQ 82
Query: 426 N 428
N
Sbjct: 83 N 83
>Z74043-5|CAA98544.1| 588|Caenorhabditis elegans Hypothetical
protein T19B10.9 protein.
Length = 588
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +1
Query: 661 PHP-ECLHPPSFQCSSDGEVGPQVVPEARLQLPTHTAQVEEASPQATPPP 807
P P E PP S P VP + +P + A ++++ P A PPP
Sbjct: 15 PGPGEACQPPMPASSFQNNGVPMTVPSSPQYIPANGAPLDQSGPIAPPPP 64
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = -3
Query: 818 GSTVGGGVACGDASSTCAVCVGNCSRASGTTCGPTSPSEEHWKEGGCRHSGWG 660
G GGG CG C G C G G P GGC G G
Sbjct: 76 GGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGG 128
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/54 (33%), Positives = 19/54 (35%), Gaps = 1/54 (1%)
Frame = -3
Query: 818 GSTVGGGVACGDASSTCAVCVGNCSRASGTTC-GPTSPSEEHWKEGGCRHSGWG 660
G GGG CG C G C G C G +S GGC G G
Sbjct: 108 GGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGG 161
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/54 (33%), Positives = 19/54 (35%), Gaps = 1/54 (1%)
Frame = -3
Query: 818 GSTVGGGVACGDASSTCAVCVGNCSRASGTTC-GPTSPSEEHWKEGGCRHSGWG 660
G GGG CG C G C G C G +S GGC G G
Sbjct: 108 GGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGG 161
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical protein
K07E12.1a protein.
Length = 13100
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 127 ARYWCKRIPTIPTMETWTPFPTARATVT 210
A Y CK +P + T TW P P +AT T
Sbjct: 12338 ADYICKIVPNVETSRTW-PTPRTKATTT 12364
>L29440-1|AAA98752.1| 570|Caenorhabditis elegans endoprotease
protein.
Length = 570
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = -2
Query: 252 CSKDYSNGS*PSLLGYCRPSRRKGSPRFHSRDCRDTLAP 136
CSK Y GS +GYCRP +GS + S C D P
Sbjct: 455 CSKGYGKGS----IGYCRPCCPEGSTK--SWQCEDCSKP 487
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin protein.
Length = 13100
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 127 ARYWCKRIPTIPTMETWTPFPTARATVT 210
A Y CK +P + T TW P P +AT T
Sbjct: 12338 ADYICKIVPNVETSRTW-PTPRTKATTT 12364
>AF039719-1|AAB96754.1| 942|Caenorhabditis elegans Blistered
cuticle protein 4, isoformd protein.
Length = 942
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = -2
Query: 252 CSKDYSNGS*PSLLGYCRPSRRKGSPRFHSRDCRDTLAP 136
CSK Y GS +GYCRP +GS + S C D P
Sbjct: 827 CSKGYGKGS----IGYCRPCCPEGSTK--SWQCEDCSKP 859
>AC006696-8|AAF39989.1| 120|Caenorhabditis elegans Hypothetical
protein W08E12.2 protein.
Length = 120
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = -3
Query: 821 SGSTVGGGVACGDASSTCAVCVGNCSRASGTTCGP 717
S GGG G C C GN +G CGP
Sbjct: 17 SAQCFGGGCGGGCFGGNCGGCSGNNCGCNGNNCGP 51
>Z49908-11|CAA90104.2| 355|Caenorhabditis elegans Hypothetical
protein T09F3.1 protein.
Length = 355
Score = 29.5 bits (63), Expect = 3.3
Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 3/93 (3%)
Frame = +1
Query: 187 PTARATVTEEAWS*AVTIILTTTPELWAVAWPRSCTASPKPHRRLQRARCTYLIVAARPL 366
PT T + + S T+ +TT + PR+ ++S A TY V L
Sbjct: 39 PTCEKTSSNQPMS---TVTSSTTSPITPSTPPRASSSSSMFAASSPSAAATYSTVTTAAL 95
Query: 367 PIPATYRNKKTK---SITLSNQRTRSSAPLKRP 456
+P T ++ K + S + N + + + LKRP
Sbjct: 96 VVPTTLQSPKREFVCSTPIKNGTSDAKSHLKRP 128
>Z49070-5|CAA88872.2| 355|Caenorhabditis elegans Hypothetical
protein T09F3.1 protein.
Length = 355
Score = 29.5 bits (63), Expect = 3.3
Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 3/93 (3%)
Frame = +1
Query: 187 PTARATVTEEAWS*AVTIILTTTPELWAVAWPRSCTASPKPHRRLQRARCTYLIVAARPL 366
PT T + + S T+ +TT + PR+ ++S A TY V L
Sbjct: 39 PTCEKTSSNQPMS---TVTSSTTSPITPSTPPRASSSSSMFAASSPSAAATYSTVTTAAL 95
Query: 367 PIPATYRNKKTK---SITLSNQRTRSSAPLKRP 456
+P T ++ K + S + N + + + LKRP
Sbjct: 96 VVPTTLQSPKREFVCSTPIKNGTSDAKSHLKRP 128
>U80453-11|AAN63452.2| 503|Caenorhabditis elegans Hypothetical
protein C23H3.9a protein.
Length = 503
Score = 29.5 bits (63), Expect = 3.3
Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 7/60 (11%)
Frame = +1
Query: 154 TIPTMETWTPFPTA-----RATVTEEAWS*AVTIILTTTPEL--WAVAWPRSCTASPKPH 312
T T T TP PT T TE + T TTTP++ WA W + TA PK +
Sbjct: 216 TATTTTTTTPLPTTTTTQPTTTTTEPTTTTTTTEPTTTTPKVNSWAKLW--TSTAEPKSY 273
>U80453-10|AAN63453.1| 489|Caenorhabditis elegans Hypothetical
protein C23H3.9b protein.
Length = 489
Score = 29.5 bits (63), Expect = 3.3
Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 7/60 (11%)
Frame = +1
Query: 154 TIPTMETWTPFPTA-----RATVTEEAWS*AVTIILTTTPEL--WAVAWPRSCTASPKPH 312
T T T TP PT T TE + T TTTP++ WA W + TA PK +
Sbjct: 212 TATTTTTTTPLPTTTTTQPTTTTTEPTTTTTTTEPTTTTPKVNSWAKLW--TSTAEPKSY 269
>U80453-9|AAT81206.1| 432|Caenorhabditis elegans Hypothetical
protein C23H3.9d protein.
Length = 432
Score = 29.5 bits (63), Expect = 3.3
Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 7/60 (11%)
Frame = +1
Query: 154 TIPTMETWTPFPTA-----RATVTEEAWS*AVTIILTTTPEL--WAVAWPRSCTASPKPH 312
T T T TP PT T TE + T TTTP++ WA W + TA PK +
Sbjct: 155 TATTTTTTTPLPTTTTTQPTTTTTEPTTTTTTTEPTTTTPKVNSWAKLW--TSTAEPKSY 212
Score = 28.3 bits (60), Expect = 7.6
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = +1
Query: 250 TTPELWAVAWPRSCTASPKPHRRLQRARCTYLIVAARPLPIPATYRNK 393
TTPE + PRS + +P +RL T AA PIP K
Sbjct: 63 TTPEAPTTSEPRSHSRDARPTQRLPLTWSTVTPTAAPSQPIPTATSRK 110
>AL132862-12|CAB60542.1| 380|Caenorhabditis elegans Hypothetical
protein Y73F8A.17 protein.
Length = 380
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +3
Query: 111 FVMMSCALLVQAYPYNPYYGNVDSLSYGS 197
F M A YPY+PYY L +GS
Sbjct: 311 FAMNQKASFANQYPYHPYYHQYSQLDHGS 339
>Z74046-1|CAA98556.2| 178|Caenorhabditis elegans Hypothetical
protein ZC116.1 protein.
Length = 178
Score = 28.7 bits (61), Expect = 5.8
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = +3
Query: 234 YYNPYYN--PRAVGGGMAAFMYRQPEAAQAPSTGQVYIPDRRRQTLADTSYVPQQENEVY 407
YY PYY P A G + +Q +A A ++ Q A + QQ+ + Y
Sbjct: 25 YYTPYYYYYPTAAVAGTTG-VAQQTQAGGASQQAYAQQQPQQNQQYAQGT---QQQQQQY 80
Query: 408 YPQQPE 425
YPQQ +
Sbjct: 81 YPQQTQ 86
>U97196-12|AAB52456.2| 564|Caenorhabditis elegans Hypothetical
protein B0207.1 protein.
Length = 564
Score = 28.7 bits (61), Expect = 5.8
Identities = 22/77 (28%), Positives = 30/77 (38%), Gaps = 2/77 (2%)
Frame = +3
Query: 240 NPYYNPRAVGGGMAAFMYRQPEAAQAPSTGQVYIPDRRRQTLADTSYVPQQENEVYY--P 413
NP NP + G+ P Q P V P R + + V Q + V P
Sbjct: 63 NPVQNPNKLSTGLPPMTMMLPPTVQEPLPTPVKTPPLPRPP-GNLNPVQQPQIPVQRTPP 121
Query: 414 QQPENPIFSPTQATELA 464
Q P P+ P Q T++A
Sbjct: 122 QCPPPPVPHPPQITQMA 138
>AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical
protein R148.3a protein.
Length = 1115
Score = 28.7 bits (61), Expect = 5.8
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 7/60 (11%)
Frame = +1
Query: 661 PHPECLHPPSFQCSSDGEV---GPQVVPEARLQLPTHTAQV--EEASPQA--TPPPTVDP 819
P P PP+ + + P+ PEA Q+P TAQ+ E A P+A P PT P
Sbjct: 375 PPPPAPPPPAPAVPEEAQAPTPAPEEAPEA--QIPAETAQIPPENAVPEAPEEPAPTTTP 432
>AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical
protein R148.3b protein.
Length = 1130
Score = 28.7 bits (61), Expect = 5.8
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 7/60 (11%)
Frame = +1
Query: 661 PHPECLHPPSFQCSSDGEV---GPQVVPEARLQLPTHTAQV--EEASPQA--TPPPTVDP 819
P P PP+ + + P+ PEA Q+P TAQ+ E A P+A P PT P
Sbjct: 387 PPPPAPPPPAPAVPEEAQAPTPAPEEAPEA--QIPAETAQIPPENAVPEAPEEPAPTTTP 444
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 378 YVPQQENEVYYPQQPENPIFSPTQATELADPTEKVE 485
YVPQ+ P PE +P+Q + +PT +E
Sbjct: 1812 YVPQETQAPIAPSNPEPVQPNPSQTVSIPEPTGNIE 1847
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = -3
Query: 818 GSTVGGGVACGDASSTCAVCVGNCSRASGTTCGPTSPSEEH 696
G GGG +CG ++ C G S + C P + + H
Sbjct: 2136 GGCSGGGNSCGGGCNSGGSCGGGGGGCSSSCCQPQTSATSH 2176
>Z98853-7|CAB57906.1| 1675|Caenorhabditis elegans Hypothetical protein
C47E8.8 protein.
Length = 1675
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 733 PEARLQLPTHTAQVEEASPQATPPPTVDPDRTKN 834
PEA++ L T T + EAS P P +D + +N
Sbjct: 1047 PEAQIPLETRTLEPSEAS-SVQPEPPIDQEEAEN 1079
>Z75530-10|CAA99796.2| 1675|Caenorhabditis elegans Hypothetical
protein C47E8.8 protein.
Length = 1675
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 733 PEARLQLPTHTAQVEEASPQATPPPTVDPDRTKN 834
PEA++ L T T + EAS P P +D + +N
Sbjct: 1047 PEAQIPLETRTLEPSEAS-SVQPEPPIDQEEAEN 1079
>Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical
protein R07E3.6 protein.
Length = 927
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +1
Query: 748 QLPTHTAQVEEASPQATPPPTVDPDRTKNCKPXT 849
Q+P Q + +P+ T PPT P T N P T
Sbjct: 763 QVPLPVVQTTQTAPKPTLPPTTLPVLTTNKTPRT 796
>L13200-7|AAA28189.1| 206|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 96
protein.
Length = 206
Score = 28.3 bits (60), Expect = 7.6
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 384 PQQENEVYYPQQPENPIFSPTQATELA 464
PQQ+ Y PQQP +PI A +A
Sbjct: 6 PQQQQPGYQPQQPSHPIVGAGAAPTMA 32
>AL032625-4|CAB63350.2| 792|Caenorhabditis elegans Hypothetical
protein Y37H9A.3 protein.
Length = 792
Score = 28.3 bits (60), Expect = 7.6
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = +1
Query: 664 HPECLHPPSFQCSSDGEVGPQVVPEARLQLPTHTAQVEEASPQATPPPTVDPDR 825
HP PP Q + E P +P+ + P TA A+P AT PT DP +
Sbjct: 217 HPPA--PPIRQAAHAAESSPPPIPQRKSSAPAPTA----AAPPATKEPT-DPKK 263
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,423,136
Number of Sequences: 27780
Number of extensions: 398603
Number of successful extensions: 1619
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1421
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1612
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -