Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_A02
(860 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5UAT5 Cluster: 60S ribosomal protein L6; n=15; Bilater... 407 e-112
UniRef50_Q9V9W3 Cluster: 60S ribosomal protein L6; n=6; Metazoa|... 216 5e-55
UniRef50_Q02878 Cluster: 60S ribosomal protein L6; n=71; Euteleo... 181 2e-44
UniRef50_Q6B8B0 Cluster: 60S ribosomal protein L6; n=1; Ixodes p... 166 5e-40
UniRef50_A7L698 Cluster: 60S ribosomal protein L6; n=1; Artemia ... 158 2e-37
UniRef50_A7S4S4 Cluster: Predicted protein; n=5; Eukaryota|Rep: ... 154 2e-36
UniRef50_Q5DE99 Cluster: 60S ribosomal protein L6; n=1; Schistos... 136 9e-31
UniRef50_A3F4R4 Cluster: 60S ribosomal protein L6; n=1; Taenia a... 124 4e-27
UniRef50_P47991 Cluster: 60S ribosomal protein L6; n=2; Caenorha... 119 1e-25
UniRef50_Q9C9C6 Cluster: 60S ribosomal protein L6-2; n=11; Eukar... 118 1e-25
UniRef50_Q7XY83 Cluster: 60S ribosomal protein L6; n=1; Griffith... 107 4e-22
UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2; Eukaryot... 105 1e-21
UniRef50_Q01IK4 Cluster: 60S ribosomal protein L6; n=17; Eukaryo... 105 2e-21
UniRef50_Q5CM54 Cluster: 60S ribosomal protein L6; n=2; Cryptosp... 97 5e-19
UniRef50_Q1DRV0 Cluster: 60S ribosomal protein L6; n=15; Pezizom... 95 2e-18
UniRef50_Q02326 Cluster: 60S ribosomal protein L6-A; n=16; Dikar... 89 1e-16
UniRef50_Q4N3I8 Cluster: 60S ribosomal protein L6e, putative; n=... 86 9e-16
UniRef50_A0CYT3 Cluster: 60S ribosomal protein L6; n=5; Oligohym... 77 6e-13
UniRef50_Q7SH22 Cluster: 60S ribosomal protein L6; n=2; Sordaria... 77 6e-13
UniRef50_Q4X638 Cluster: 60S ribosomal subunit protein L6e, puta... 73 7e-12
UniRef50_A0N0S1 Cluster: 60S ribosomal protein L6; n=1; Strongyl... 73 7e-12
UniRef50_UPI0000DC20AA Cluster: UPI0000DC20AA related cluster; n... 72 2e-11
UniRef50_UPI0000DA1E66 Cluster: PREDICTED: similar to ribosomal ... 72 2e-11
UniRef50_Q4Q4D3 Cluster: 60S ribosomal protein L6, putative; n=1... 62 2e-08
UniRef50_A5C5P0 Cluster: 60S ribosomal protein L6; n=1; Vitis vi... 61 4e-08
UniRef50_A2EBD1 Cluster: 60S ribosomal protein L6, putative; n=7... 55 3e-06
UniRef50_Q8SR91 Cluster: 60S RIBOSOMAL PROTEIN L6; n=1; Encephal... 47 5e-04
UniRef50_Q98RL7 Cluster: 60S ribosomal protein L6B; n=1; Guillar... 44 0.005
UniRef50_Q8U2L5 Cluster: 50S ribosomal protein L14e; n=5; Archae... 41 0.046
UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia... 40 0.081
UniRef50_P54054 Cluster: 50S ribosomal protein L14e; n=8; Euryar... 40 0.11
UniRef50_A7QIH5 Cluster: Chromosome chr12 scaffold_103, whole ge... 39 0.19
UniRef50_Q8ZYB4 Cluster: 50S ribosomal protein L14e; n=14; Archa... 38 0.25
UniRef50_A2RKU3 Cluster: Cation-transporting ATPase; n=2; Lactoc... 36 1.3
UniRef50_A2DQF0 Cluster: Surface protein, putative; n=1; Trichom... 35 2.3
UniRef50_Q7UL14 Cluster: Putative uncharacterized protein; n=2; ... 34 4.0
UniRef50_Q4ZTN3 Cluster: Sensor protein; n=5; Pseudomonas|Rep: S... 34 5.3
UniRef50_Q55S59 Cluster: Putative uncharacterized protein; n=2; ... 33 7.0
UniRef50_A7ET80 Cluster: Putative uncharacterized protein; n=1; ... 33 7.0
UniRef50_UPI0000E48871 Cluster: PREDICTED: similar to JMJD1B pro... 33 9.3
UniRef50_Q7SHY6 Cluster: Predicted protein; n=1; Neurospora cras... 33 9.3
>UniRef50_Q5UAT5 Cluster: 60S ribosomal protein L6; n=15;
Bilateria|Rep: 60S ribosomal protein L6 - Bombyx mori
(Silk moth)
Length = 273
Score = 407 bits (1001), Expect = e-112
Identities = 198/226 (87%), Positives = 200/226 (88%)
Frame = +1
Query: 106 STKKPRNYDLGNGVMRFSKSKMFHKKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGT 285
STKKPRNYDLGNGVMRFSKSKMFHKKAKYKFIG LTVVVKQIGGEKNGGT
Sbjct: 25 STKKPRNYDLGNGVMRFSKSKMFHKKAKYKFIGKKNPKPEKPKKLTVVVKQIGGEKNGGT 84
Query: 286 RTVPLKRRKSFYPTQEKICASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVG 465
RTVPLKRRKSFYPTQEKI ASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVG
Sbjct: 85 RTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVG 144
Query: 466 ILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXX 645
ILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYF
Sbjct: 145 ILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFKKNKKCVKR 204
Query: 646 XXXXXEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDRR 783
EGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPD++
Sbjct: 205 TVKRKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKK 250
Score = 52.8 bits (121), Expect = 1e-05
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = +3
Query: 777 QKVLRGYLKAAFGLRSXQYPHRLRF 851
+KVLRGYLKAAFGLRS QYPHRLRF
Sbjct: 249 KKVLRGYLKAAFGLRSSQYPHRLRF 273
>UniRef50_Q9V9W3 Cluster: 60S ribosomal protein L6; n=6;
Metazoa|Rep: 60S ribosomal protein L6 - Drosophila
melanogaster (Fruit fly)
Length = 262
Score = 216 bits (528), Expect = 5e-55
Identities = 112/222 (50%), Positives = 141/222 (63%)
Frame = +1
Query: 112 KKPRNYDLGNGVMRFSKSKMFHKKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRT 291
K P N L G++R+SK++M+ ++A Y+ VK+IGG KNGG RT
Sbjct: 19 KHPVNSYLKGGILRYSKAQMYKRRALYRLKDKKSPVVEKAKVPIKKVKKIGGPKNGGERT 78
Query: 292 VPLKRRKSFYPTQEKICASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGIL 471
V LK+ K+ YPT+ + FS+H R R NL GTV ILLAGRH GKRVVL+ +L
Sbjct: 79 VFLKKSKASYPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLAGRHQGKRVVLLKVL 138
Query: 472 PSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXX 651
SGLLLVTGPFA NSCPLRR+ QRYVIGTS+++ LG FK+P+H ND YF
Sbjct: 139 ASGLLLVTGPFALNSCPLRRVSQRYVIGTSSKVDLGAFKVPEHLNDAYFRRLKAKKDKKT 198
Query: 652 XXXEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPD 777
DIFA KKE++VP+EQRK DQK VD A++K I A P+
Sbjct: 199 GEA---DIFAAKKERFVPNEQRKKDQKEVDAALLKVIKAHPE 237
>UniRef50_Q02878 Cluster: 60S ribosomal protein L6; n=71;
Euteleostomi|Rep: 60S ribosomal protein L6 - Homo
sapiens (Human)
Length = 288
Score = 181 bits (441), Expect = 2e-44
Identities = 100/224 (44%), Positives = 132/224 (58%), Gaps = 6/224 (2%)
Frame = +1
Query: 121 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 288
RN L G+ R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 289 TVPLKRRKSFYPTQE--KICASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLV 462
V L++ +YPT++ + S G +PFS+HVR++R ++ GT+ I+L GRH GKRVV +
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
Query: 463 GILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXX 642
L SGLLLVTGP N PLRR Q++VI TST+I + N K+PKH D YF
Sbjct: 166 KQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF---KKKKL 222
Query: 643 XXXXXXEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARP 774
EG +IF T+KEKY +EQRK DQK VD ++ I A P
Sbjct: 223 RKPRHQEG-EIFDTEKEKYEITEQRKIDQKAVDSQILPKIKAIP 265
>UniRef50_Q6B8B0 Cluster: 60S ribosomal protein L6; n=1; Ixodes
pacificus|Rep: 60S ribosomal protein L6 - Ixodes
pacificus (western blacklegged tick)
Length = 268
Score = 166 bits (404), Expect = 5e-40
Identities = 93/224 (41%), Positives = 130/224 (58%), Gaps = 2/224 (0%)
Frame = +1
Query: 118 PRNYDLGNGVMRFSKSKMFHKKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRTVP 297
P+N+ L GV FS+SKMFHK+ +K V VK++ GEKNGG R +P
Sbjct: 25 PKNHKLPGGVWLFSRSKMFHKRGLFKVKHAAPTKEKRKRKKRVTVKRVKGEKNGGKRVLP 84
Query: 298 LKRRKSFYPTQE--KICASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGIL 471
LK+ + YPT++ + +S +P S+ +R + GTV ILLAG H GKRVV + L
Sbjct: 85 LKKERRSYPTEDSPQHKRTSHMKPSSRTRVALRKRITPGTVLILLAGPHRGKRVVFLKQL 144
Query: 472 PSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXX 651
+GLL VTGP+ N CPLRRI Q YVI TST++ L KLP+ +D YF
Sbjct: 145 KTGLLPVTGPYGVNGCPLRRINQIYVIATSTKLDLSKVKLPEGLDDRYF--KRNKGPKRG 202
Query: 652 XXXEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDRR 783
EG +IF K +++V SE+ K Q VD+ V++A+ A P+++
Sbjct: 203 RKDEG-EIFEAKPQEHVVSEEHKKTQAEVDKQVLEAVKAHPEKK 245
>UniRef50_A7L698 Cluster: 60S ribosomal protein L6; n=1; Artemia
franciscana|Rep: 60S ribosomal protein L6 - Artemia
sanfranciscana (Brine shrimp) (Artemia franciscana)
Length = 241
Score = 158 bits (383), Expect = 2e-37
Identities = 86/178 (48%), Positives = 112/178 (62%)
Frame = +1
Query: 244 VVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKICASSGGRPFSKHVRRIRPNLKIGTVCIL 423
V+ K+IGG+KNGGTR V ++ FYP + +K+ +IR +L+ GT+ IL
Sbjct: 44 VIEKKIGGDKNGGTRLVSTRKPPQFYPINSRQKRFHRRLVNNKNPPKIRKSLQPGTILIL 103
Query: 424 LAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHF 603
LAG + GKRVVL+ L SGLLLV+GP N PLRR+ Q+ VI TSTRI + N K+P+H
Sbjct: 104 LAGVNRGKRVVLLKALKSGLLLVSGPLKVNRVPLRRVHQKLVIATSTRIDISNVKVPEHI 163
Query: 604 NDDYFXXXXXXXXXXXXXXEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPD 777
ND YF EG DIFA+K E+Y P+EQRK DQ VD ++KAI A+PD
Sbjct: 164 NDTYF----RRHKVKKEAKEG-DIFASKPERYTPTEQRKKDQAEVDVQLLKAIKAQPD 216
>UniRef50_A7S4S4 Cluster: Predicted protein; n=5; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 244
Score = 154 bits (374), Expect = 2e-36
Identities = 90/221 (40%), Positives = 121/221 (54%)
Frame = +1
Query: 121 RNYDLGNGVMRFSKSKMFHKKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRTVPL 300
RN +L G+ R+S+S ++ K+A YK T K IGG+KNGG R VP+
Sbjct: 11 RNPELAPGISRYSRSAIYKKRALYKRKKTGVKKVVQDEPRTKT-KDIGGDKNGGKRVVPV 69
Query: 301 KRRKSFYPTQEKICASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSG 480
+R +YPT++ + R + ++R ++ GTV ILLAG H GKRVV + L SG
Sbjct: 70 QRESRYYPTED-VRRRLANRK-KPGMAKLRSSITPGTVLILLAGAHRGKRVVFLKQLNSG 127
Query: 481 LLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXX 660
LLLVTGPF N PLRRIPQ YVI TST I + + KLP+H F
Sbjct: 128 LLLVTGPFKINGVPLRRIPQSYVIATSTHIDVSDVKLPEH----AFADESYFKGEPKKKK 183
Query: 661 EGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDRR 783
+D+F E+ PSEQR DQK VD+ ++ I A P+ +
Sbjct: 184 RSEDMFEEAAEEKKPSEQRIADQKAVDDQILPKISAVPNMK 224
>UniRef50_Q5DE99 Cluster: 60S ribosomal protein L6; n=1; Schistosoma
japonicum|Rep: 60S ribosomal protein L6 - Schistosoma
japonicum (Blood fluke)
Length = 238
Score = 136 bits (328), Expect = 9e-31
Identities = 68/140 (48%), Positives = 89/140 (63%)
Frame = +1
Query: 364 FSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQR 543
FS HVR+IR +++ GTV ILLAG H GKRV+ + L SGLLLVTGPF +N PLRR+ Q
Sbjct: 80 FSNHVRKIRSSIQPGTVLILLAGPHKGKRVIFLKALKSGLLLVTGPFKYNGVPLRRVNQC 139
Query: 544 YVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEGDDIFATKKEKYVPSEQRKT 723
YVI TSTRI + F +PKH +D+YF + +F+T+ +KY S+ RK
Sbjct: 140 YVIATSTRIDISKFDVPKHIDDEYF----RRVDLKESKTDAGKLFSTETKKYTVSDIRKE 195
Query: 724 DQKTVDEAVIKAIGARPDRR 783
DQK VD + AI + PD +
Sbjct: 196 DQKLVDNQIRAAIKSHPDSK 215
>UniRef50_A3F4R4 Cluster: 60S ribosomal protein L6; n=1; Taenia
asiatica|Rep: 60S ribosomal protein L6 - Taenia asiatica
(Asian tapeworm)
Length = 212
Score = 124 bits (298), Expect = 4e-27
Identities = 66/132 (50%), Positives = 81/132 (61%)
Frame = +1
Query: 364 FSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQR 543
F+ H RRIR ++ G V ILLAGRH KRVV + L SGLLLVTGPF +N PLRR+ QR
Sbjct: 86 FADHRRRIRKSITPGKVLILLAGRHRAKRVVFLKSLASGLLLVTGPFKYNGVPLRRVNQR 145
Query: 544 YVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEGDDIFATKKEKYVPSEQRKT 723
YVI T TRI + N K+P ND++F D IFA +++KY S+ RK
Sbjct: 146 YVIATKTRIKIKNIKIPSQLNDEFFRRQDLKTKKSV-----DKIFAEEEKKYTVSDDRKK 200
Query: 724 DQKTVDEAVIKA 759
QK VD A+I A
Sbjct: 201 LQKQVDTALIAA 212
>UniRef50_P47991 Cluster: 60S ribosomal protein L6; n=2;
Caenorhabditis|Rep: 60S ribosomal protein L6 -
Caenorhabditis elegans
Length = 217
Score = 119 bits (286), Expect = 1e-25
Identities = 64/134 (47%), Positives = 82/134 (61%), Gaps = 1/134 (0%)
Frame = +1
Query: 385 IRPNLKIGTVCILLAGRHAGKRVVLVGILP-SGLLLVTGPFAFNSCPLRRIPQRYVIGTS 561
+R L GTV I+LAGRH GKRVV + LP SGLLLVTGP N PLRRI Q +VI TS
Sbjct: 67 LRKTLTPGTVLIVLAGRHKGKRVVFLKQLPQSGLLLVTGPHKINGFPLRRIGQAFVIATS 126
Query: 562 TRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEGDDIFATKKEKYVPSEQRKTDQKTVD 741
++++ K+P+H ND+YF G +IFA+ K +Y SEQRK D KTVD
Sbjct: 127 LKVNVSGVKIPEHINDEYFKRKSTAQKT------GKNIFASGKTEYTVSEQRKKDIKTVD 180
Query: 742 EAVIKAIGARPDRR 783
++ AI P+ +
Sbjct: 181 APILAAIKKHPEHK 194
>UniRef50_Q9C9C6 Cluster: 60S ribosomal protein L6-2; n=11;
Eukaryota|Rep: 60S ribosomal protein L6-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 233
Score = 118 bits (285), Expect = 1e-25
Identities = 82/224 (36%), Positives = 115/224 (51%)
Frame = +1
Query: 106 STKKPRNYDLGNGVMRFSKSKMFHKKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGT 285
+ K RN DL GV ++S+S+M+HK+ + + V
Sbjct: 7 TAKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKV------------ 54
Query: 286 RTVPLKRRKSFYPTQEKICASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVG 465
P+++ FYP ++ + R +K + +R ++ GTV I+LAGR GKRVV +
Sbjct: 55 -DAPVEKPPKFYPAED-VKKPLPNRRTAKPAK-LRASITPGTVLIILAGRFKGKRVVFLK 111
Query: 466 ILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXX 645
L SGLLLVTGPF N PLRR+ Q YVIGTST++ + L K F+D YF
Sbjct: 112 QLASGLLLVTGPFKINGVPLRRVNQAYVIGTSTKVDISGVTLDK-FDDKYF---GKVAEK 167
Query: 646 XXXXXEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPD 777
EG+ A K+EK + +K DQK VD A+IKAI A P+
Sbjct: 168 KKKKTEGEFFEAEKEEKKEIPQGKKDDQKAVDAALIKAIEAVPE 211
>UniRef50_Q7XY83 Cluster: 60S ribosomal protein L6; n=1; Griffithsia
japonica|Rep: 60S ribosomal protein L6 - Griffithsia
japonica (Red alga)
Length = 216
Score = 107 bits (257), Expect = 4e-22
Identities = 66/179 (36%), Positives = 91/179 (50%)
Frame = +1
Query: 238 LTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKICASSGGRPFSKHVRRIRPNLKIGTVC 417
+ ++ K IGG KNGG R VP K+ +YP +K + K + +RP++K GT+
Sbjct: 20 IKMIKKPIGGAKNGGYRLVPEKKGPKWYPADDKKTPVPSRKNVHKPTK-LRPSIKSGTIV 78
Query: 418 ILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPK 597
ILLAG G RVV++ L SG LLVTGP+A N PL R+ QRYVI TST I + + K
Sbjct: 79 ILLAGVFRGSRVVVLKQLDSGQLLVTGPYAVNRIPLTRVDQRYVIATSTSIDVSKVDV-K 137
Query: 598 HFNDDYFXXXXXXXXXXXXXXEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARP 774
++ YF D ++K E R DQK +D ++ I P
Sbjct: 138 KIDNAYFRKPQKKKKTDVMEV---DTAKKDEQKTKAIEARIADQKAIDAVLLPVIEKEP 193
>UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2;
Eukaryota|Rep: 60S ribosomal protein L6 - Dictyostelium
discoideum AX4
Length = 236
Score = 105 bits (253), Expect = 1e-21
Identities = 63/161 (39%), Positives = 86/161 (53%)
Frame = +1
Query: 280 GTRTVPLKRRKSFYPTQEKICASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVL 459
G R + K K F P+ S+ + + V +R ++ GTV I+LAGR AGKRVV
Sbjct: 54 GKRVIAAKASK-FAPSIPAEIRSTAAKKVQQKVA-LRKSITPGTVLIILAGRFAGKRVVA 111
Query: 460 VGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXX 639
+ L SGL+L+TGPF N PLRRI QRYVI TST+I + + K+ ND YF
Sbjct: 112 LKQLDSGLILITGPFKVNGVPLRRIDQRYVIATSTKIDVSSVKVAATINDAYFAAEKKST 171
Query: 640 XXXXXXXEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAI 762
D+ K EK ++ R DQK+VD A++ +
Sbjct: 172 TKSEGAFFSDE---KKAEKKKIADSRVADQKSVDSAILAVL 209
>UniRef50_Q01IK4 Cluster: 60S ribosomal protein L6; n=17;
Eukaryota|Rep: 60S ribosomal protein L6 - Oryza sativa
(Rice)
Length = 222
Score = 105 bits (251), Expect = 2e-21
Identities = 64/134 (47%), Positives = 82/134 (61%), Gaps = 2/134 (1%)
Frame = +1
Query: 382 RIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTS 561
++R ++ GTV ILLAGR GKRVV + L SGLLLVTGPF N P+RR+ Q YVI TS
Sbjct: 73 KLRSSITPGTVLILLAGRFMGKRVVFLKQLKSGLLLVTGPFKINGVPIRRVNQPYVIATS 132
Query: 562 TRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEGDDIFATKKE--KYVPSEQRKTDQKT 735
T++ + + K F+D YF EG ++F T+KE K +P E +K DQK
Sbjct: 133 TKVDISGVNVEK-FDDKYF---SRDKKQKAKKTEG-ELFETEKEATKNLP-EFKKEDQKV 186
Query: 736 VDEAVIKAIGARPD 777
VD +IKAI A PD
Sbjct: 187 VDAELIKAIEAVPD 200
>UniRef50_Q5CM54 Cluster: 60S ribosomal protein L6; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L6 -
Cryptosporidium hominis
Length = 184
Score = 97.1 bits (231), Expect = 5e-19
Identities = 55/142 (38%), Positives = 81/142 (57%)
Frame = +1
Query: 349 SGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLR 528
S R S ++R +L+ G VCILLAG + GKRVV++ LPSGL++VTGP+A N P+R
Sbjct: 23 SSRRKASVVAPKLRSSLQPGVVCILLAGPYKGKRVVMLKALPSGLVVVTGPYALNGVPVR 82
Query: 529 RIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEGDDIFATKKEKYVPS 708
R+ Y+I TST++ + + K F D+YF D TK + V S
Sbjct: 83 RVNPAYIIATSTKVDVSKADVSK-FTDEYFKVDRSKLKKSKDAFM-DQGEETKVNRVV-S 139
Query: 709 EQRKTDQKTVDEAVIKAIGARP 774
E+RK Q+ +D ++I +I + P
Sbjct: 140 EERKKTQQALDASIIPSIQSNP 161
>UniRef50_Q1DRV0 Cluster: 60S ribosomal protein L6; n=15;
Pezizomycotina|Rep: 60S ribosomal protein L6 -
Coccidioides immitis
Length = 206
Score = 95.1 bits (226), Expect = 2e-18
Identities = 65/188 (34%), Positives = 95/188 (50%), Gaps = 10/188 (5%)
Frame = +1
Query: 241 TVVVKQIGGEKN--GGTRTVPLKRRKS--FYPTQEKICASSGGRPFSKHVRRIRPNLKIG 408
T+ K +G K G R +P +K+ +YP ++ + + H ++RP+L+ G
Sbjct: 4 TLDSKSVGQTKKFGKGERVIPHPSQKAQKWYPADDEPQPKKARK--TAHPTKLRPSLQPG 61
Query: 409 TVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNF- 585
T+ ILLAGR GKRV+L+ L G+LLVTGPF N PLRR+ RYVI TS+ + L
Sbjct: 62 TILILLAGRFRGKRVILLKHLGQGVLLVTGPFKLNGVPLRRVNARYVIATSSTVDLNGVD 121
Query: 586 --KLPKHFNDDYFXXXXXXXXXXXXXXEGDDIF---ATKKEKYVPSEQRKTDQKTVDEAV 750
L K +YF +G++ F K EK + R DQK +D+A+
Sbjct: 122 QKTLEKVSQPEYF------TREKAEQKKGEEAFFKQGEKPEKKKVASARAADQKAIDQAL 175
Query: 751 IKAIGARP 774
+ I P
Sbjct: 176 LATIKKEP 183
>UniRef50_Q02326 Cluster: 60S ribosomal protein L6-A; n=16;
Dikarya|Rep: 60S ribosomal protein L6-A - Saccharomyces
cerevisiae (Baker's yeast)
Length = 176
Score = 89.0 bits (211), Expect = 1e-16
Identities = 57/158 (36%), Positives = 87/158 (55%)
Frame = +1
Query: 301 KRRKSFYPTQEKICASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSG 480
++ +YP+++ + A R ++ +++R +L GTV ILLAGR GKRVV + L
Sbjct: 4 QKAPKWYPSED-VAALKKTRKAARP-QKLRASLVPGTVLILLAGRFRGKRVVYLKHLEDN 61
Query: 481 LLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXX 660
LL++GPF N PLRR+ RYVI TST++S+ + K FN +YF
Sbjct: 62 TLLISGPFKVNGVPLRRVNARYVIATSTKVSVEGVNVEK-FNVEYFAKEKLTKKEKKEA- 119
Query: 661 EGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARP 774
++F ++ K + +E R DQK VD+A+I I P
Sbjct: 120 ---NLFPEQQNKEIKAE-RVEDQKVVDKALIAEIKKTP 153
>UniRef50_Q4N3I8 Cluster: 60S ribosomal protein L6e, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L6e, putative -
Theileria parva
Length = 212
Score = 86.2 bits (204), Expect = 9e-16
Identities = 48/93 (51%), Positives = 60/93 (64%)
Frame = +1
Query: 292 VPLKRRKSFYPTQEKICASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGIL 471
V L RRK+ K GR ++ V ++R +LK G V ILL G + GKRVVL+ +L
Sbjct: 12 VKLNRRKTVVTRLGK--TKVVGRKYAS-VPKVRESLKPGAVLILLTGSYKGKRVVLLKVL 68
Query: 472 PSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRI 570
SGLLLVTGPF+FN PLRR+ RYVI TST +
Sbjct: 69 KSGLLLVTGPFSFNGVPLRRVNSRYVIATSTNV 101
>UniRef50_A0CYT3 Cluster: 60S ribosomal protein L6; n=5;
Oligohymenophorea|Rep: 60S ribosomal protein L6 -
Paramecium tetraurelia
Length = 208
Score = 77.0 bits (181), Expect = 6e-13
Identities = 47/122 (38%), Positives = 62/122 (50%), Gaps = 3/122 (2%)
Frame = +1
Query: 406 GTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNF 585
G V ILL+GR GKRVV + L SGLLLVTGPF N PL+R+ YVI TST++ +
Sbjct: 61 GQVLILLSGRFQGKRVVFLKQLKSGLLLVTGPFKINGVPLKRVNSAYVIPTSTKVDVTGV 120
Query: 586 KLPKHFNDDYFXXXXXXXXXXXX---XXEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIK 756
NDDYF G+ + + + ++ QK+VD A+I
Sbjct: 121 N-ANQINDDYFKRTQAQRRKNEQGFWAKRGELTVEQQTAEKTRLDGKRNTQKSVDAALIT 179
Query: 757 AI 762
AI
Sbjct: 180 AI 181
>UniRef50_Q7SH22 Cluster: 60S ribosomal protein L6; n=2;
Sordariaceae|Rep: 60S ribosomal protein L6 - Neurospora
crassa
Length = 207
Score = 77.0 bits (181), Expect = 6e-13
Identities = 41/75 (54%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Frame = +1
Query: 358 RPFSKHVRRIRPNLKI--GTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRR 531
RP K +R P + GTV ILLAGR GKRVVL+ L G+LLVTGPF N PLRR
Sbjct: 24 RPVRKTIRPWSPRSTLVPGTVLILLAGRFRGKRVVLLKALDQGVLLVTGPFKINGVPLRR 83
Query: 532 IPQRYVIGTSTRISL 576
+ RYVI TS ++ L
Sbjct: 84 VNARYVIATSQKVDL 98
>UniRef50_Q4X638 Cluster: 60S ribosomal subunit protein L6e,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L6e, putative - Plasmodium chabaudi
Length = 241
Score = 73.3 bits (172), Expect = 7e-12
Identities = 44/115 (38%), Positives = 64/115 (55%), Gaps = 7/115 (6%)
Frame = +1
Query: 247 VVKQIGGEKNGGTRTVPLKRRKSFYPTQEK--ICASSGGRPFS---KHV--RRIRPNLKI 405
VV G +KN V ++K P + K I GR + K V R++R ++++
Sbjct: 17 VVPATGDKKNALKHYVIKGQKKILTPVRAKKTISKKHYGRKLASKKKFVVQRKMRSSIQV 76
Query: 406 GTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRI 570
G V I+L G+H GKR ++ +L SGLL V GP+ N PL+R+ RY+I TST I
Sbjct: 77 GKVAIILTGKHMGKRCIIAKVLKSGLLAVVGPYEVNGVPLKRVDPRYLIVTSTNI 131
>UniRef50_A0N0S1 Cluster: 60S ribosomal protein L6; n=1;
Strongyloides papillosus|Rep: 60S ribosomal protein L6 -
Strongyloides papillosus
Length = 127
Score = 73.3 bits (172), Expect = 7e-12
Identities = 39/104 (37%), Positives = 55/104 (52%)
Frame = +1
Query: 481 LLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXX 660
L GPF+ N P+RRI Q++V+ TST+I + K+P DDYF
Sbjct: 10 LFTFLGPFSINGVPVRRIAQKFVLPTSTKIDVSGVKIPATMTDDYF------KRTKYFGK 63
Query: 661 EGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDRRCSA 792
E DIF K++Y ++ RK DQKT+D AV+ +I D + A
Sbjct: 64 EKKDIFEQGKQEYTLTDARKADQKTIDTAVLGSIKKHTDGKLLA 107
Score = 33.9 bits (74), Expect = 5.3
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +3
Query: 756 SHRSPTRQKVLRGYLKAAFGLRSXQYPHRLRF 851
S + T K+L GYL+ FGL QYPH + F
Sbjct: 96 SIKKHTDGKLLAGYLRTNFGLSKRQYPHNMVF 127
>UniRef50_UPI0000DC20AA Cluster: UPI0000DC20AA related cluster; n=2;
Rattus norvegicus|Rep: UPI0000DC20AA UniRef100 entry -
Rattus norvegicus
Length = 261
Score = 72.1 bits (169), Expect = 2e-11
Identities = 63/211 (29%), Positives = 95/211 (45%)
Frame = +1
Query: 121 RNYDLGNGVMRFSKSKMFHKKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRTVPL 300
RN L G R+S ++ +K Y + + V+K + G+KNGGT V L
Sbjct: 49 RNPILVRGTGRYSIKALYERK--YSAVKSKCEKKKKEKVVATVIKTVSGDKNGGTGVVKL 106
Query: 301 KRRKSFYPTQEKICASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSG 480
++ K + + C + P KH + + N TV I++ G+H +RVV + L G
Sbjct: 107 QKMKMYLGS----CKAMAKSPAFKHEKAVC-NSTPETVLIIITGQH--RRVVFLKQLSRG 159
Query: 481 LLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXX 660
LL+TGP A N L R Q+ V+ TST I+ D YF
Sbjct: 160 FLLITGPLALNLVLLYRTHQKSVVITSTTINTQ--------TDVYF----KMKQLHKPRH 207
Query: 661 EGDDIFATKKEKYVPSEQRKTDQKTVDEAVI 753
+ IF +K+KY +Q K D KT+D ++
Sbjct: 208 QQGKIFDMEKDKY-GIKQCKADHKTLDSQIL 237
>UniRef50_UPI0000DA1E66 Cluster: PREDICTED: similar to ribosomal
protein L6; n=5; Eutheria|Rep: PREDICTED: similar to
ribosomal protein L6 - Rattus norvegicus
Length = 112
Score = 71.7 bits (168), Expect = 2e-11
Identities = 37/70 (52%), Positives = 43/70 (61%)
Frame = +1
Query: 409 TVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFK 588
TV I+L GRH GKRVV + L SGLLLVTGP A N PL R+ Q VI T T++ + K
Sbjct: 13 TVLIILTGRHRGKRVVFLKQLGSGLLLVTGPLALNRVPLCRMHQSVVISTFTKVDICKVK 72
Query: 589 LPKHFNDDYF 618
KH D F
Sbjct: 73 TSKHLTDASF 82
>UniRef50_Q4Q4D3 Cluster: 60S ribosomal protein L6, putative; n=11;
Trypanosomatidae|Rep: 60S ribosomal protein L6, putative
- Leishmania major
Length = 195
Score = 62.1 bits (144), Expect = 2e-08
Identities = 29/67 (43%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Frame = +1
Query: 385 IRPNLKIGTVCILLAGRHAGKRVVLVGILP-SGLLLVTGPFAFNSCPLRRIPQRYVIGTS 561
+R + G + I+LAGR G+R V++ LP +G L+V+GP +N P+RRI RYVI TS
Sbjct: 29 LRKSCAPGAIAIILAGRFRGRRAVILKQLPHNGPLVVSGPMKYNGVPIRRIDSRYVIATS 88
Query: 562 TRISLGN 582
T + + +
Sbjct: 89 TTVDISS 95
>UniRef50_A5C5P0 Cluster: 60S ribosomal protein L6; n=1; Vitis
vinifera|Rep: 60S ribosomal protein L6 - Vitis vinifera
(Grape)
Length = 249
Score = 60.9 bits (141), Expect = 4e-08
Identities = 32/75 (42%), Positives = 41/75 (54%)
Frame = +1
Query: 445 KRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXX 624
KRVV + L SGLLL+TG F N PLRR+ Q YVI TST++ + + K F+D YF
Sbjct: 156 KRVVFLKQLSSGLLLITGSFKINGVPLRRVNQAYVIATSTKVDIPKVNVEK-FDDKYFAK 214
Query: 625 XXXXXXXXXXXXEGD 669
+GD
Sbjct: 215 KVQKKRRSWALDKGD 229
>UniRef50_A2EBD1 Cluster: 60S ribosomal protein L6, putative; n=7;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L6,
putative - Trichomonas vaginalis G3
Length = 151
Score = 54.8 bits (126), Expect = 3e-06
Identities = 27/63 (42%), Positives = 39/63 (61%)
Frame = +1
Query: 388 RPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTR 567
RP+LK+GTV I++ G H GKR V+V +G++ + GP P+ I Q Y+I TST
Sbjct: 53 RPSLKVGTVVIVVGGEHQGKRAVVVADQGAGIVKIAGPVV----PVNEISQDYLIATSTS 108
Query: 568 ISL 576
I +
Sbjct: 109 IEV 111
>UniRef50_Q8SR91 Cluster: 60S RIBOSOMAL PROTEIN L6; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L6 -
Encephalitozoon cuniculi
Length = 155
Score = 47.2 bits (107), Expect = 5e-04
Identities = 25/63 (39%), Positives = 36/63 (57%)
Frame = +1
Query: 388 RPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTR 567
R +L G V ++L G A +RVV + L + L GP + N PL RI +RY++ TST
Sbjct: 24 RTDLVKGMVVVVLEGVFASRRVVYLKGLEDNIALCAGPKSINGIPLFRIDERYLLATSTV 83
Query: 568 ISL 576
+ L
Sbjct: 84 LDL 86
>UniRef50_Q98RL7 Cluster: 60S ribosomal protein L6B; n=1; Guillardia
theta|Rep: 60S ribosomal protein L6B - Guillardia theta
(Cryptomonas phi)
Length = 169
Score = 44.0 bits (99), Expect = 0.005
Identities = 25/74 (33%), Positives = 38/74 (51%)
Frame = +1
Query: 394 NLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRIS 573
+ KIG + I+ + GK+ V +G G LL++G FN +I +YV+ + +
Sbjct: 41 DFKIGDILIIKKRNNYGKKCVFLGHTDDGNLLLSGIMKFNGIGYLKIHWKYVVKSGVSLK 100
Query: 574 LGNFKLPKHFNDDY 615
NF L KH N DY
Sbjct: 101 GLNF-LTKHTNKDY 113
>UniRef50_Q8U2L5 Cluster: 50S ribosomal protein L14e; n=5;
Archaea|Rep: 50S ribosomal protein L14e - Pyrococcus
furiosus
Length = 83
Score = 40.7 bits (91), Expect = 0.046
Identities = 18/53 (33%), Positives = 33/53 (62%)
Frame = +1
Query: 391 PNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYV 549
P + +G + +++AGR AG++VV+V I+ +LVTG N RR+ +++
Sbjct: 2 PAIDVGRIAVVIAGRRAGQKVVVVDIIDKNFVLVTGA-GLNKVKRRRMNIKHI 53
>UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia
lamblia ATCC 50803|Rep: 60S ribosomal protein L27 -
Giardia lamblia ATCC 50803
Length = 135
Score = 39.9 bits (89), Expect = 0.081
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +1
Query: 388 RPNLKIGTVCILLAGRHAGKRVVLVGILP 474
+P +K G VCI+L GRHAGK+ V+V LP
Sbjct: 3 QPIIKPGLVCIVLQGRHAGKKAVIVEALP 31
>UniRef50_P54054 Cluster: 50S ribosomal protein L14e; n=8;
Euryarchaeota|Rep: 50S ribosomal protein L14e -
Methanococcus jannaschii
Length = 80
Score = 39.5 bits (88), Expect = 0.11
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +1
Query: 391 PNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRI 534
P +++G VCI AGR AGK V+V IL ++V G C ++ +
Sbjct: 2 PAIEVGRVCIKTAGREAGKVCVIVDILDKNFVIVDGLVKRRRCNIKHL 49
>UniRef50_A7QIH5 Cluster: Chromosome chr12 scaffold_103, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_103, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 345
Score = 38.7 bits (86), Expect = 0.19
Identities = 22/47 (46%), Positives = 29/47 (61%)
Frame = +1
Query: 382 RIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCP 522
++R ++ GTV I+LAGR VV + L SGLLL+TG F N P
Sbjct: 227 KLRASITPGTVLIILAGR-----VVFLKQLSSGLLLITGSFKINDVP 268
>UniRef50_Q8ZYB4 Cluster: 50S ribosomal protein L14e; n=14;
Archaea|Rep: 50S ribosomal protein L14e - Pyrobaculum
aerophilum
Length = 103
Score = 38.3 bits (85), Expect = 0.25
Identities = 17/60 (28%), Positives = 32/60 (53%)
Frame = +1
Query: 397 LKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISL 576
+ IG V + + GR AG++ V+V I+ +++TGP RR+ ++ T +I +
Sbjct: 5 IDIGRVVVKVLGREAGRKAVVVDIVDENYVVITGPKPITGVKRRRVNINHIEPTDKKIDI 64
>UniRef50_A2RKU3 Cluster: Cation-transporting ATPase; n=2;
Lactococcus lactis subsp. cremoris|Rep:
Cation-transporting ATPase - Lactococcus lactis subsp.
cremoris (strain MG1363)
Length = 841
Score = 35.9 bits (79), Expect = 1.3
Identities = 16/44 (36%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
Frame = +1
Query: 448 RVVLVGILPSGLLLVTGPFAFNSCPLRRIPQR--YVIGTSTRIS 573
+++++GI+P +L++ F F+S L IPQR +IGT+ I+
Sbjct: 215 KIIVIGIIPISILVLLNQFVFSSLDLSVIPQRKTAIIGTAATIT 258
>UniRef50_A2DQF0 Cluster: Surface protein, putative; n=1;
Trichomonas vaginalis G3|Rep: Surface protein, putative
- Trichomonas vaginalis G3
Length = 827
Score = 35.1 bits (77), Expect = 2.3
Identities = 21/91 (23%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Frame = +2
Query: 581 TSNCQNTSMMITSRRIRSASNVQSNAK-RVMTSLPQKKRNTFHLSSAKPIRRQSTRL*SK 757
T+N +S++ ++R+ + N + A+ V+ S+P+ T + KP+ +++ +
Sbjct: 193 TANAPESSLIPPAQRLENMLNQNAPAQPAVVKSVPKITVQTTQTQTKKPVPQETPKSQEP 252
Query: 758 PSEPDPTEG--APRIPQSGLRTPLXPISPSA 844
P +P+P + AP P + P P P +
Sbjct: 253 PKQPEPAKPAVAPPKPPEEVPKPAEPEKPKS 283
>UniRef50_Q7UL14 Cluster: Putative uncharacterized protein; n=2;
Bacteria|Rep: Putative uncharacterized protein -
Rhodopirellula baltica
Length = 84
Score = 34.3 bits (75), Expect = 4.0
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Frame = -3
Query: 207 FANELVFSLLV--EHLGFGETHHSVAQIIVPRFFR----RFFLSHRTCRCGSRLGRRF 52
FA EL FS++ EH+G T + P+ FR RF + R+CR G+R RRF
Sbjct: 20 FAGEL-FSVIARCEHIGGPNTDVDRRAVFWPKIFRFAAGRFQSTFRSCRVGARYSRRF 76
>UniRef50_Q4ZTN3 Cluster: Sensor protein; n=5; Pseudomonas|Rep:
Sensor protein - Pseudomonas syringae pv. syringae
(strain B728a)
Length = 676
Score = 33.9 bits (74), Expect = 5.3
Identities = 19/53 (35%), Positives = 31/53 (58%)
Frame = +1
Query: 355 GRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFN 513
GR ++ R++RP LK+ + + G +A V G L +G+ L+T PFAF+
Sbjct: 617 GRQLAEIARQLRPELKV----LFITG-YAEHAAVRGGFLDTGMQLITKPFAFD 664
>UniRef50_Q55S59 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 986
Score = 33.5 bits (73), Expect = 7.0
Identities = 20/70 (28%), Positives = 33/70 (47%)
Frame = +2
Query: 626 IRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIRRQSTRL*SKPSEPDPTEGAPRIPQS 805
+RS+S ++ + +RV+ S+ F +A P+R S+ KP E P P P S
Sbjct: 563 LRSSSAIRKHRRRVIESVSDDDDPRFTTDTALPLREPSSNFIRKPQETAPLPSPP--PTS 620
Query: 806 GLRTPLXPIS 835
+ PI+
Sbjct: 621 SVAPSSPPIA 630
>UniRef50_A7ET80 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 752
Score = 33.5 bits (73), Expect = 7.0
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = +1
Query: 271 KNGGTRTVPLKRRKSFYPTQEKICASSGGRPFSKHVRRIRPNLK 402
K R LK SF P + + ASS GRP K +R+R LK
Sbjct: 128 KEDHNREEELKAMVSFMPHRPAVDASSSGRPMKKDSKRMRNGLK 171
>UniRef50_UPI0000E48871 Cluster: PREDICTED: similar to JMJD1B protein,
partial; n=2; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to JMJD1B protein, partial -
Strongylocentrotus purpuratus
Length = 2799
Score = 33.1 bits (72), Expect = 9.3
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Frame = +2
Query: 596 NTSMMITSRRIRSASNVQ--SNAKRVMTSLPQKKRNTFHLSSAKPIRRQSTRL*SKPSEP 769
N ++ +R I ++++V S+ +T LP RN++ ++S ST + SK P
Sbjct: 794 NLQSVLPNRTIATSNSVPVISHGNGGLTGLPGMDRNSYGITSENTKLSNSTNISSKSFAP 853
Query: 770 DPTEGAPRIPQSGLRTPLXPISPSAA 847
P G RI + +R P S S +
Sbjct: 854 QPVLG-ERIARPEVRDPRRETSSSTS 878
>UniRef50_Q7SHY6 Cluster: Predicted protein; n=1; Neurospora
crassa|Rep: Predicted protein - Neurospora crassa
Length = 398
Score = 33.1 bits (72), Expect = 9.3
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Frame = +2
Query: 572 HSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIRRQSTRL* 751
HSA ++ +T + + + RS +N++++A TSLP T + ++P+ TR
Sbjct: 165 HSAANDSSSTIARLGNNQNRSTTNMRTSAAASSTSLP---TTTTTNAGSRPVAGTRTRAQ 221
Query: 752 SKPSEPD-PTEGAPRIPQSGLRTPLXPISP 838
+ P P T + P+ GL P P P
Sbjct: 222 TTPDTPSRSTNSSSPPPRVGL--PPVPSGP 249
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 865,617,423
Number of Sequences: 1657284
Number of extensions: 17682564
Number of successful extensions: 50601
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 48058
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50481
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 76243001646
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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