Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_pT_P24
(746 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC041028-1|AAH41028.1| 347|Homo sapiens FLJ10769 protein protein. 151 3e-36
AL139385-4|CAI17008.1| 390|Homo sapiens novel protein containin... 124 3e-28
AK001631-1|BAA91797.1| 390|Homo sapiens protein ( Homo sapiens ... 122 1e-27
AF091088-1|AAC72957.1| 114|Homo sapiens unknown protein. 98 3e-20
AK024260-1|BAB14863.1| 126|Homo sapiens protein ( Homo sapiens ... 56 1e-07
BC064916-1|AAH64916.1| 511|Homo sapiens SMG6 protein protein. 31 3.3
AY168921-1|AAO17581.1| 1388|Homo sapiens Est1p-like protein A pr... 31 3.3
AY145883-1|AAN46114.1| 1419|Homo sapiens telomerase subunit EST1... 31 3.3
AB018275-1|BAA34452.2| 1449|Homo sapiens KIAA0732 protein protein. 31 3.3
AL357497-2|CAI16226.1| 812|Homo sapiens novel protein similar t... 30 7.7
AL121955-1|CAI22075.1| 812|Homo sapiens novel protein similar t... 30 7.7
>BC041028-1|AAH41028.1| 347|Homo sapiens FLJ10769 protein protein.
Length = 347
Score = 151 bits (365), Expect = 3e-36
Identities = 93/245 (37%), Positives = 137/245 (55%), Gaps = 16/245 (6%)
Frame = -1
Query: 746 ASAVIKSYSPELIVHPLLDKQDAVEEILPWFDRLHSIVIGPGLGRDWQTFDIIAKLIEVI 567
A+ VIK+YSPELIVHP+LD +AV E+ W RLH++V+GPGLGRD + ++EV
Sbjct: 112 AAPVIKAYSPELIVHPVLDSPNAVHEVEKWLPRLHALVVGPGLGRDDALLRNVQGILEVS 171
Query: 566 KQKKIPIIIDADGLFLITEKPNLIKDFDSPVILTPNKIEFERLSNKI-----D------- 423
K + IP++IDADGL+L+ ++P LI + +LTPN +EF RL + + D
Sbjct: 172 KARDIPVVIDADGLWLVAQQPALIHGY-RKAVLTPNHVEFSRLYDAVLRGPMDSDDSHGS 230
Query: 422 ----VQTMGKNVTILKKGPNDELISPFPEFTWSLETXXXXXXXXXXGDLLSGTIATFMHW 255
Q +G NVT+++KG D L + S E GDLLSG++ +HW
Sbjct: 231 VLRLSQALG-NVTVVQKGERDILSNGQQVLVCSQE--GSSRRCGGQGDLLSGSLGVLVHW 287
Query: 254 TLVNIDKIKIPDISNNKMLAASLSCYAACILVRKCNEKAFKLKGRSMLATDMIEFIHDAF 75
L + P +N ++ + AC L R+CN +AF+ GRS +DMI + AF
Sbjct: 288 AL-----LAGPQKTNGSS-PLLVAAFGACSLTRQCNHQAFQKHGRSTTTSDMIAEVGAAF 341
Query: 74 EELYD 60
+L++
Sbjct: 342 SKLFE 346
>AL139385-4|CAI17008.1| 390|Homo sapiens novel protein containing a
carbohydrate kinase domain protein.
Length = 390
Score = 124 bits (299), Expect = 3e-28
Identities = 74/183 (40%), Positives = 106/183 (57%), Gaps = 16/183 (8%)
Frame = -1
Query: 746 ASAVIKSYSPELIVHPLLDKQDAVEEILPWFDRLHSIVIGPGLGRDWQTFDIIAKLIEVI 567
A+ VIK+YSPELIVHP+LD +AV E+ W RLH++V+GPGLGRD + ++EV
Sbjct: 112 AAPVIKAYSPELIVHPVLDSPNAVHEVEKWLPRLHALVVGPGLGRDDALLRNVQGILEVS 171
Query: 566 KQKKIPIIIDADGLFLITEKPNLIKDFDSPVILTPNKIEFERLSNKI-----D------- 423
K + IP++IDADGL+L+ ++P LI + +LTPN +EF RL + + D
Sbjct: 172 KARDIPVVIDADGLWLVAQQPALIHGY-RKAVLTPNHVEFSRLYDAVLRGPMDSDDSHGS 230
Query: 422 ----VQTMGKNVTILKKGPNDELISPFPEFTWSLETXXXXXXXXXXGDLLSGTIATFMHW 255
Q +G NVT+++KG D L + S E GDLLSG++ +HW
Sbjct: 231 VLRLSQALG-NVTVVQKGERDILSNGQQVLVCSQE--GSSRRCGGQGDLLSGSLGVLVHW 287
Query: 254 TLV 246
L+
Sbjct: 288 ALL 290
>AK001631-1|BAA91797.1| 390|Homo sapiens protein ( Homo sapiens
cDNA FLJ10769 fis, clone NT2RP4000151. ).
Length = 390
Score = 122 bits (294), Expect = 1e-27
Identities = 73/183 (39%), Positives = 106/183 (57%), Gaps = 16/183 (8%)
Frame = -1
Query: 746 ASAVIKSYSPELIVHPLLDKQDAVEEILPWFDRLHSIVIGPGLGRDWQTFDIIAKLIEVI 567
A+ VIK+YSPELIVHP+LD +AV E+ W RLH++V+GPGLGRD + ++EV
Sbjct: 112 AAPVIKAYSPELIVHPVLDSPNAVHEVEKWLPRLHALVVGPGLGRDDALLRNVQGILEVS 171
Query: 566 KQKKIPIIIDADGLFLITEKPNLIKDFDSPVILTPNKIEFERLSNKI-----D------- 423
K + IP++IDADGL+L+ ++P LI + +LTP+ +EF RL + + D
Sbjct: 172 KARDIPVVIDADGLWLVAQQPALIHGY-RKAVLTPDHVEFSRLYDAVLRGPMDSDDSHGS 230
Query: 422 ----VQTMGKNVTILKKGPNDELISPFPEFTWSLETXXXXXXXXXXGDLLSGTIATFMHW 255
Q +G NVT+++KG D L + S E GDLLSG++ +HW
Sbjct: 231 VLRLSQALG-NVTVVQKGERDILSNGQQVLVCSQE--GSSRRCGGQGDLLSGSLGVLVHW 287
Query: 254 TLV 246
L+
Sbjct: 288 ALL 290
>AF091088-1|AAC72957.1| 114|Homo sapiens unknown protein.
Length = 114
Score = 98.3 bits (234), Expect = 3e-20
Identities = 44/97 (45%), Positives = 66/97 (68%)
Frame = -1
Query: 716 ELIVHPLLDKQDAVEEILPWFDRLHSIVIGPGLGRDWQTFDIIAKLIEVIKQKKIPIIID 537
E+IVHP+LD +AV E+ W RLH++V+G GLGRD + ++EV K + IP++ID
Sbjct: 5 EMIVHPVLDSPNAVHEVEKWLPRLHALVVGTGLGRDDALLRNVQGILEVSKARDIPVVID 64
Query: 536 ADGLFLITEKPNLIKDFDSPVILTPNKIEFERLSNKI 426
ADGL+L+ ++P LI + +LTPN +EF RL + +
Sbjct: 65 ADGLWLVAQQPALIHGY-RKAVLTPNHVEFSRLYDAV 100
>AK024260-1|BAB14863.1| 126|Homo sapiens protein ( Homo sapiens
cDNA FLJ14198 fis, clone NT2RP3002512. ).
Length = 126
Score = 56.4 bits (130), Expect = 1e-07
Identities = 39/120 (32%), Positives = 60/120 (50%)
Frame = -1
Query: 419 QTMGKNVTILKKGPNDELISPFPEFTWSLETXXXXXXXXXXGDLLSGTIATFMHWTLVNI 240
Q +G NVT+++KG D L + S E GDLLSG++ +HW L
Sbjct: 15 QALG-NVTVVQKGERDILPNGQQVLVCSQE--GSSRRCGGQGDLLSGSLGVLVHWAL--- 68
Query: 239 DKIKIPDISNNKMLAASLSCYAACILVRKCNEKAFKLKGRSMLATDMIEFIHDAFEELYD 60
+ P +N ++ + AC L R+CN +AF+ GRS +DMI + AF +L++
Sbjct: 69 --LAGPQKTNGSS-PLLVAAFGACSLTRQCNHQAFQKHGRSTTTSDMIAEVGAAFSKLFE 125
>BC064916-1|AAH64916.1| 511|Homo sapiens SMG6 protein protein.
Length = 511
Score = 31.5 bits (68), Expect = 3.3
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Frame = -1
Query: 608 WQTFDIIAKLIEVIKQKKIPIIIDADG--LFLITEKPNLIKDFDSPVILTP-NKIEFERL 438
W T ++ + Q ++P+ D D LI E+ L+ F P++ P + E+
Sbjct: 150 WSTLADFCNILTAVNQSEVPLYKDPDDDLTLLILEEDRLLSGF-VPLLAAPQDPCYVEKT 208
Query: 437 SNKIDVQTMGKNVTILK 387
S+K+ + K VT+LK
Sbjct: 209 SDKV-IAADCKRVTVLK 224
>AY168921-1|AAO17581.1| 1388|Homo sapiens Est1p-like protein A
protein.
Length = 1388
Score = 31.5 bits (68), Expect = 3.3
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Frame = -1
Query: 608 WQTFDIIAKLIEVIKQKKIPIIIDADG--LFLITEKPNLIKDFDSPVILTP-NKIEFERL 438
W T ++ + Q ++P+ D D LI E+ L+ F P++ P + E+
Sbjct: 1027 WSTLADFCNILTAVNQSEVPLYKDPDDDLTLLILEEDRLLSGF-VPLLAAPQDPCYVEKT 1085
Query: 437 SNKIDVQTMGKNVTILK 387
S+K+ + K VT+LK
Sbjct: 1086 SDKV-IAADCKRVTVLK 1101
>AY145883-1|AAN46114.1| 1419|Homo sapiens telomerase subunit EST1A
protein.
Length = 1419
Score = 31.5 bits (68), Expect = 3.3
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Frame = -1
Query: 608 WQTFDIIAKLIEVIKQKKIPIIIDADG--LFLITEKPNLIKDFDSPVILTP-NKIEFERL 438
W T ++ + Q ++P+ D D LI E+ L+ F P++ P + E+
Sbjct: 1058 WSTLADFCNILTAVNQSEVPLYKDPDDDLTLLILEEDRLLSGF-VPLLAAPQDPCYVEKT 1116
Query: 437 SNKIDVQTMGKNVTILK 387
S+K+ + K VT+LK
Sbjct: 1117 SDKV-IAADCKRVTVLK 1132
>AB018275-1|BAA34452.2| 1449|Homo sapiens KIAA0732 protein protein.
Length = 1449
Score = 31.5 bits (68), Expect = 3.3
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Frame = -1
Query: 608 WQTFDIIAKLIEVIKQKKIPIIIDADG--LFLITEKPNLIKDFDSPVILTP-NKIEFERL 438
W T ++ + Q ++P+ D D LI E+ L+ F P++ P + E+
Sbjct: 1088 WSTLADFCNILTAVNQSEVPLYKDPDDDLTLLILEEDRLLSGF-VPLLAAPQDPCYVEKT 1146
Query: 437 SNKIDVQTMGKNVTILK 387
S+K+ + K VT+LK
Sbjct: 1147 SDKV-IAADCKRVTVLK 1162
>AL357497-2|CAI16226.1| 812|Homo sapiens novel protein similar to
synaptonemal complex protein 2 (SYCP2) protein.
Length = 812
Score = 30.3 bits (65), Expect = 7.7
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -1
Query: 701 PLLDKQDAVEEILPWFDRLHSIVIGPGLGRDWQTFDII 588
PLL +Q + +I+ WF+R I+ GL D +I
Sbjct: 102 PLLIRQGLIPKIISWFERTTGILTSEGLASDTSLICVI 139
>AL121955-1|CAI22075.1| 812|Homo sapiens novel protein similar to
synaptonemal complex protein 2 (SYCP2) protein.
Length = 812
Score = 30.3 bits (65), Expect = 7.7
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -1
Query: 701 PLLDKQDAVEEILPWFDRLHSIVIGPGLGRDWQTFDII 588
PLL +Q + +I+ WF+R I+ GL D +I
Sbjct: 102 PLLIRQGLIPKIISWFERTTGILTSEGLASDTSLICVI 139
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,347,851
Number of Sequences: 237096
Number of extensions: 1806618
Number of successful extensions: 3980
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3974
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8959138240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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