Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_pT_P24
(746 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z14092-2|CAA78469.2| 307|Caenorhabditis elegans Hypothetical pr... 94 8e-20
L23649-1|AAA27912.1| 568|Caenorhabditis elegans Hypothetical pr... 29 4.6
AF101316-2|AAC69230.1| 692|Caenorhabditis elegans Hypothetical ... 29 4.6
U80023-9|AAG24041.1| 257|Caenorhabditis elegans Hypothetical pr... 28 6.1
AF000263-13|AAO21393.1| 695|Caenorhabditis elegans Hypothetical... 28 8.1
AF000263-12|AAO21392.1| 838|Caenorhabditis elegans Hypothetical... 28 8.1
AF000263-11|AAL77184.1| 866|Caenorhabditis elegans Hypothetical... 28 8.1
AF000263-8|AAK21461.1| 924|Caenorhabditis elegans Hypothetical ... 28 8.1
AF000263-7|AAK21463.1| 925|Caenorhabditis elegans Hypothetical ... 28 8.1
AC025726-4|AAK73922.1| 198|Caenorhabditis elegans Prion-like-(q... 28 8.1
AF348166-1|AAK37544.1| 1221|Caenorhabditis elegans Toll-like rec... 25 8.3
AC006604-2|AAF39752.2| 1221|Caenorhabditis elegans Toll (drosoph... 25 8.3
>Z14092-2|CAA78469.2| 307|Caenorhabditis elegans Hypothetical
protein R107.2 protein.
Length = 307
Score = 94.3 bits (224), Expect = 8e-20
Identities = 71/230 (30%), Positives = 111/230 (48%), Gaps = 19/230 (8%)
Frame = -1
Query: 746 ASAVIKSYSPELIVHPLLDKQDAVEEILPWFDRLHSIVIGPGLGRDWQTFDIIAKLIEVI 567
A+ VIK YSP+LIVHP + I+P R+ +IVIGPGLGR+ + ++ +L E +
Sbjct: 59 AAQVIKGYSPDLIVHPGM----TANSIIPKLSRMDAIVIGPGLGRNPNIWPLMQELFEFV 114
Query: 566 KQKKIPIIIDADGLFLITEKPNLIKDFDSPVILTPNKIEFERL-------------SNKI 426
+ + +P +ID DGL+ ++E S +LTPN +EF RL N
Sbjct: 115 RNRDVPFVIDGDGLWFVSEHIEKFPRQMSATVLTPNIVEFSRLCKSALGEEDVLNVRNNS 174
Query: 425 DVQTMG------KNVTILKKGPNDELISPFPEFTWSLETXXXXXXXXXXGDLLSGTIATF 264
+Q + NVTI KG D +++P E + T GD+ +G++ F
Sbjct: 175 QLQHLAAELSRKMNVTIYLKGEVDLVVTPNGEVS-KCSTESSLRRCGGQGDVTAGSLGLF 233
Query: 263 MHWTLVNIDKIKIPDISNNKMLAASLSCYAACILVRKCNEKAFKLKGRSM 114
++W N + ++ A + A+ LVR +AF+ GRSM
Sbjct: 234 LYWAKKN--------LGDDWTSAHHEAGIASSWLVRTAGRRAFEKHGRSM 275
>L23649-1|AAA27912.1| 568|Caenorhabditis elegans Hypothetical
protein C02C2.4 protein.
Length = 568
Score = 28.7 bits (61), Expect = 4.6
Identities = 21/56 (37%), Positives = 26/56 (46%)
Frame = +1
Query: 463 GVNITGESKSLIKFGFSVIKNKPSASMIMGIFFCLMTSINFAIISNVCQSLPNPGP 630
GV G S SLI F V + P+ +I FFCLM S +S SL + P
Sbjct: 404 GVASFGSSFSLILLAFFVDCSNPTTGLI---FFCLMYSSMGTFVSGFYTSLLSLAP 456
>AF101316-2|AAC69230.1| 692|Caenorhabditis elegans Hypothetical
protein F52F10.4 protein.
Length = 692
Score = 28.7 bits (61), Expect = 4.6
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -1
Query: 179 YAACILVRKCNEKAFKLKGRSMLATDMIE 93
YA CI+++KCN K K+ ++ A ++
Sbjct: 57 YAECIIMKKCNAKELKVLRDNLYAVQQLD 85
>U80023-9|AAG24041.1| 257|Caenorhabditis elegans Hypothetical
protein F07C4.10 protein.
Length = 257
Score = 28.3 bits (60), Expect = 6.1
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +1
Query: 4 ISXDHYFTITILIKTKHYWSYNSSKASCINSIISVA-NILRP 126
++ D+ + ++ T W Y+ S SC N I A N+L P
Sbjct: 21 VNGDYNCSYSVTFSTPDVWRYSPSAVSCSNVISDAACNVLYP 62
>AF000263-13|AAO21393.1| 695|Caenorhabditis elegans Hypothetical
protein T08B2.5g protein.
Length = 695
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 274 IVPDNKSPCPPHLRPDPPVSNDQVNSGNGLINSSLGP 384
++P N S PP+L PP+ Q NG+I + P
Sbjct: 279 MIPPNFSVPPPNLSVPPPMQATQPEHQNGVIGMTQTP 315
>AF000263-12|AAO21392.1| 838|Caenorhabditis elegans Hypothetical
protein T08B2.5f protein.
Length = 838
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 274 IVPDNKSPCPPHLRPDPPVSNDQVNSGNGLINSSLGP 384
++P N S PP+L PP+ Q NG+I + P
Sbjct: 422 MIPPNFSVPPPNLSVPPPMQATQPEHQNGVIGMTQTP 458
>AF000263-11|AAL77184.1| 866|Caenorhabditis elegans Hypothetical
protein T08B2.5c protein.
Length = 866
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 274 IVPDNKSPCPPHLRPDPPVSNDQVNSGNGLINSSLGP 384
++P N S PP+L PP+ Q NG+I + P
Sbjct: 450 MIPPNFSVPPPNLSVPPPMQATQPEHQNGVIGMTQTP 486
>AF000263-8|AAK21461.1| 924|Caenorhabditis elegans Hypothetical
protein T08B2.5a protein.
Length = 924
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 274 IVPDNKSPCPPHLRPDPPVSNDQVNSGNGLINSSLGP 384
++P N S PP+L PP+ Q NG+I + P
Sbjct: 508 MIPPNFSVPPPNLSVPPPMQATQPEHQNGVIGMTQTP 544
>AF000263-7|AAK21463.1| 925|Caenorhabditis elegans Hypothetical
protein T08B2.5b protein.
Length = 925
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 274 IVPDNKSPCPPHLRPDPPVSNDQVNSGNGLINSSLGP 384
++P N S PP+L PP+ Q NG+I + P
Sbjct: 509 MIPPNFSVPPPNLSVPPPMQATQPEHQNGVIGMTQTP 545
>AC025726-4|AAK73922.1| 198|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 88
protein.
Length = 198
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/32 (34%), Positives = 14/32 (43%)
Frame = +1
Query: 277 VPDNKSPCPPHLRPDPPVSNDQVNSGNGLINS 372
VP + +P PP PDPP G G +
Sbjct: 20 VPPSTTPVPPPNFPDPPTQEQVQQQGGGFFGN 51
>AF348166-1|AAK37544.1| 1221|Caenorhabditis elegans Toll-like
receptor TOL-1 protein.
Length = 1221
Score = 24.6 bits (51), Expect(2) = 8.3
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -1
Query: 221 DISNNKMLAASLSCYAACILVRKCNEKAFKLK 126
D+SNN++ +A C +RK + K K+K
Sbjct: 478 DVSNNEISLLFKDAFARCPKLRKISMKMNKIK 509
Score = 21.4 bits (43), Expect(2) = 8.3
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -1
Query: 293 DLLSGTIATFMHWTLVNIDKIKIPDISNNKM 201
DL IA + L I ++ D+SNN++
Sbjct: 430 DLSHNRIAKVYQYVLNKIKQLHTVDLSNNQL 460
>AC006604-2|AAF39752.2| 1221|Caenorhabditis elegans Toll
(drosophila) family protein 1 protein.
Length = 1221
Score = 24.6 bits (51), Expect(2) = 8.3
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -1
Query: 221 DISNNKMLAASLSCYAACILVRKCNEKAFKLK 126
D+SNN++ +A C +RK + K K+K
Sbjct: 478 DVSNNEISLLFKDAFARCPKLRKISMKMNKIK 509
Score = 21.4 bits (43), Expect(2) = 8.3
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -1
Query: 293 DLLSGTIATFMHWTLVNIDKIKIPDISNNKM 201
DL IA + L I ++ D+SNN++
Sbjct: 430 DLSHNRIAKVYQYVLNKIKQLHTVDLSNNQL 460
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,029,417
Number of Sequences: 27780
Number of extensions: 294007
Number of successful extensions: 747
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 710
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 746
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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