Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_pT_P24
(746 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly pro... 26 0.33
AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly pro... 23 2.3
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 23 3.0
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 22 5.3
DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly pro... 22 5.3
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 22 7.0
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 22 7.0
AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 22 7.0
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 21 9.3
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 21 9.3
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 21 9.3
>AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly
protein 8 protein.
Length = 416
Score = 26.2 bits (55), Expect = 0.33
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -1
Query: 404 NVTILKKGPNDELISPFPEFTWS 336
NV K G L++P+P++TW+
Sbjct: 89 NVITNKTGNGGPLLAPYPDWTWA 111
>AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly
protein MRJP5 protein.
Length = 598
Score = 23.4 bits (48), Expect = 2.3
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = -1
Query: 404 NVTILKKGPNDELISPFPEFTWS 336
NV K G L+ P+P+++W+
Sbjct: 95 NVISEKIGNGGRLLQPYPDWSWA 117
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 23.0 bits (47), Expect = 3.0
Identities = 8/23 (34%), Positives = 15/23 (65%)
Frame = -1
Query: 404 NVTILKKGPNDELISPFPEFTWS 336
NV KKG L+ P+P+++++
Sbjct: 97 NVVTNKKGKGGPLLRPYPDWSFA 119
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 22.2 bits (45), Expect = 5.3
Identities = 11/40 (27%), Positives = 18/40 (45%)
Frame = +1
Query: 253 VQCMNVAIVPDNKSPCPPHLRPDPPVSNDQVNSGNGLINS 372
VQ N V + C P + +P ++D N L+N+
Sbjct: 98 VQFRNTPEVHQAINTCQPSIPLEPDFTSDVTERDNHLVNA 137
>DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly
protein 9 protein.
Length = 423
Score = 22.2 bits (45), Expect = 5.3
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = -1
Query: 404 NVTILKKGPNDELISPFPEFTWS 336
NV K G L+ P+P ++W+
Sbjct: 92 NVISNKIGNGGPLLEPYPNWSWA 114
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.8 bits (44), Expect = 7.0
Identities = 7/14 (50%), Positives = 13/14 (92%)
Frame = +2
Query: 413 LSVHLFYYLVVQIL 454
+S+H+F+ LVV+I+
Sbjct: 284 ISLHVFFLLVVEII 297
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.8 bits (44), Expect = 7.0
Identities = 7/14 (50%), Positives = 13/14 (92%)
Frame = +2
Query: 413 LSVHLFYYLVVQIL 454
+S+H+F+ LVV+I+
Sbjct: 284 ISLHVFFLLVVEII 297
>AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly
protein MRJP6 protein.
Length = 437
Score = 21.8 bits (44), Expect = 7.0
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = -1
Query: 404 NVTILKKGPNDELISPFPEFTWS 336
NV K G L+ P+P+++W+
Sbjct: 95 NVISEKIGNGGCLLQPYPDWSWA 117
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.4 bits (43), Expect = 9.3
Identities = 12/41 (29%), Positives = 17/41 (41%)
Frame = +3
Query: 540 NDNGYFLLLDDFY*FCYYIKCLPISS*SRANNYRMEPVKPW 662
N+N Y Y YI+ +PI N+ P+ PW
Sbjct: 101 NNNNYNNNCKKLYYNINYIEQIPIPVPVYYGNFPPRPMGPW 141
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.4 bits (43), Expect = 9.3
Identities = 12/41 (29%), Positives = 17/41 (41%)
Frame = +3
Query: 540 NDNGYFLLLDDFY*FCYYIKCLPISS*SRANNYRMEPVKPW 662
N+N Y Y YI+ +PI N+ P+ PW
Sbjct: 101 NNNNYNNNCKKLYYNINYIEQIPIPVPVYYGNFPPRPMGPW 141
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.4 bits (43), Expect = 9.3
Identities = 12/41 (29%), Positives = 17/41 (41%)
Frame = +3
Query: 540 NDNGYFLLLDDFY*FCYYIKCLPISS*SRANNYRMEPVKPW 662
N+N Y Y YI+ +PI N+ P+ PW
Sbjct: 101 NNNNYNNNCKKLYYNINYIEQIPIPVPVYYGNFPPRPMGPW 141
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,329
Number of Sequences: 438
Number of extensions: 4085
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23388480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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