Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_P21
         (588 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    24   0.96 
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           24   0.96 
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           24   0.96 
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    23   2.9  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    22   3.9  
DQ494419-1|ABF55370.1|  127|Apis mellifera telomerase reverse tr...    22   5.1  
DQ494418-1|ABF55369.1|  110|Apis mellifera telomerase reverse tr...    22   5.1  
DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.               21   9.0  

>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 24.2 bits (50), Expect = 0.96
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 404 IQWTPGNPTIVTIIALS 354
           I+W  GNP  +T+I LS
Sbjct: 193 IEWFGGNPKRITLIGLS 209


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 24.2 bits (50), Expect = 0.96
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 404 IQWTPGNPTIVTIIALS 354
           I+W  GNP  +T+I LS
Sbjct: 64  IEWFGGNPKRITLIGLS 80


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 24.2 bits (50), Expect = 0.96
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 404 IQWTPGNPTIVTIIALS 354
           I+W  GNP  +T+I LS
Sbjct: 193 IEWFGGNPKRITLIGLS 209


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -2

Query: 587 IVGAPREKSRKSHPAC 540
           I+G P E+ +K +P C
Sbjct: 203 ILGVPAERHKKYYPCC 218


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = +2

Query: 527 EWQFYMRDEISYF 565
           EW  Y RDE  YF
Sbjct: 544 EWPSYSRDEPKYF 556


>DQ494419-1|ABF55370.1|  127|Apis mellifera telomerase reverse
           transcriptase protein.
          Length = 127

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 7/23 (30%), Positives = 15/23 (65%)
 Frame = +1

Query: 163 NKQHITRLFYFNYYSNILHLQWT 231
           ++Q  ++L  + + + ILH+ WT
Sbjct: 84  SQQKTSKLKIYKWNNQILHILWT 106


>DQ494418-1|ABF55369.1|  110|Apis mellifera telomerase reverse
           transcriptase protein.
          Length = 110

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 7/23 (30%), Positives = 15/23 (65%)
 Frame = +1

Query: 163 NKQHITRLFYFNYYSNILHLQWT 231
           ++Q  ++L  + + + ILH+ WT
Sbjct: 67  SQQKTSKLKIYKWNNQILHILWT 89


>DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.
          Length = 152

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -2

Query: 509 ISYFSPLLHNVLLCLNSFEINLD 441
           +SY      ++ LCL    +NLD
Sbjct: 14  VSYMMVRCDDITLCLKQENLNLD 36


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,794
Number of Sequences: 438
Number of extensions: 3928
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17115420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)