Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_pT_P20
(421 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC067102-1|AAH67102.1| 1141|Homo sapiens PRDM15 protein protein. 31 1.6
AY078498-1|AAL85487.2| 1507|Homo sapiens zinc finger 298 protein. 31 1.6
AB051815-2|BAD99020.1| 647|Homo sapiens zinc finger protein ZNF... 31 1.6
AB051814-2|BAD99018.1| 647|Homo sapiens zinc finger protein ZNF... 31 1.6
AB051813-1|BAD99016.1| 1161|Homo sapiens zinc finger protein ZNF... 31 1.6
AB051812-1|BAD99015.1| 1141|Homo sapiens zinc finger protein ZNF... 31 1.6
AY063456-1|AAL60596.1| 353|Homo sapiens C21orf83 isoform C prot... 29 6.3
DQ013130-1|AAY67799.1| 2014|Homo sapiens leucine-rich repeat kin... 29 8.4
BC146769-1|AAI46770.1| 1369|Homo sapiens LRRK1 protein protein. 29 8.4
BC066655-1|AAH66655.1| 439|Homo sapiens LRRK1 protein protein. 29 8.4
BC005408-1|AAH05408.2| 659|Homo sapiens LRRK1 protein protein. 29 8.4
AK131075-1|BAC85125.1| 1112|Homo sapiens FLJ00262 protein protein. 29 8.4
AB058693-1|BAB47419.1| 1369|Homo sapiens KIAA1790 protein protein. 29 8.4
>BC067102-1|AAH67102.1| 1141|Homo sapiens PRDM15 protein protein.
Length = 1141
Score = 31.1 bits (67), Expect = 1.6
Identities = 11/42 (26%), Positives = 18/42 (42%)
Frame = +1
Query: 283 CAEHTDL*EFFCFIFDRTFXXXXXXXXXXXXXSLSKHWKCSI 408
C HT + +F C + +TF ++ K W CS+
Sbjct: 793 CKRHTGIKDFMCELCGKTFSERNTMETHKLIHTVGKQWTCSV 834
>AY078498-1|AAL85487.2| 1507|Homo sapiens zinc finger 298 protein.
Length = 1507
Score = 31.1 bits (67), Expect = 1.6
Identities = 11/42 (26%), Positives = 18/42 (42%)
Frame = +1
Query: 283 CAEHTDL*EFFCFIFDRTFXXXXXXXXXXXXXSLSKHWKCSI 408
C HT + +F C + +TF ++ K W CS+
Sbjct: 1159 CKRHTGIKDFMCELCGKTFSERNTMETHKLIHTVGKQWTCSV 1200
>AB051815-2|BAD99020.1| 647|Homo sapiens zinc finger protein
ZNF298d protein.
Length = 647
Score = 31.1 bits (67), Expect = 1.6
Identities = 11/42 (26%), Positives = 18/42 (42%)
Frame = +1
Query: 283 CAEHTDL*EFFCFIFDRTFXXXXXXXXXXXXXSLSKHWKCSI 408
C HT + +F C + +TF ++ K W CS+
Sbjct: 299 CKRHTGIKDFMCELCGKTFSERNTMETHKLIHTVGKQWTCSV 340
>AB051814-2|BAD99018.1| 647|Homo sapiens zinc finger protein
ZNF298c protein.
Length = 647
Score = 31.1 bits (67), Expect = 1.6
Identities = 11/42 (26%), Positives = 18/42 (42%)
Frame = +1
Query: 283 CAEHTDL*EFFCFIFDRTFXXXXXXXXXXXXXSLSKHWKCSI 408
C HT + +F C + +TF ++ K W CS+
Sbjct: 299 CKRHTGIKDFMCELCGKTFSERNTMETHKLIHTVGKQWTCSV 340
>AB051813-1|BAD99016.1| 1161|Homo sapiens zinc finger protein
ZNF298b protein.
Length = 1161
Score = 31.1 bits (67), Expect = 1.6
Identities = 11/42 (26%), Positives = 18/42 (42%)
Frame = +1
Query: 283 CAEHTDL*EFFCFIFDRTFXXXXXXXXXXXXXSLSKHWKCSI 408
C HT + +F C + +TF ++ K W CS+
Sbjct: 813 CKRHTGIKDFMCELCGKTFSERNTMETHKLIHTVGKQWTCSV 854
>AB051812-1|BAD99015.1| 1141|Homo sapiens zinc finger protein
ZNF298a protein.
Length = 1141
Score = 31.1 bits (67), Expect = 1.6
Identities = 11/42 (26%), Positives = 18/42 (42%)
Frame = +1
Query: 283 CAEHTDL*EFFCFIFDRTFXXXXXXXXXXXXXSLSKHWKCSI 408
C HT + +F C + +TF ++ K W CS+
Sbjct: 793 CKRHTGIKDFMCELCGKTFSERNTMETHKLIHTVGKQWTCSV 834
>AY063456-1|AAL60596.1| 353|Homo sapiens C21orf83 isoform C
protein.
Length = 353
Score = 29.1 bits (62), Expect = 6.3
Identities = 11/42 (26%), Positives = 17/42 (40%)
Frame = +1
Query: 283 CAEHTDL*EFFCFIFDRTFXXXXXXXXXXXXXSLSKHWKCSI 408
C HT + F C + +TF ++ K W CS+
Sbjct: 5 CKRHTGIKIFMCELCGKTFSERNTMETHKLIHTVGKQWTCSV 46
>DQ013130-1|AAY67799.1| 2014|Homo sapiens leucine-rich repeat kinase 1
protein.
Length = 2014
Score = 28.7 bits (61), Expect = 8.4
Identities = 19/49 (38%), Positives = 25/49 (51%)
Frame = -1
Query: 337 TYDQR*NKRTLKGQCVLHTQLYKLDGANRVVLCMI**PPQKRNKMNLIA 191
T DQ+ TLKG C L+T LD VV C + P K+N ++A
Sbjct: 1597 TEDQKIYIYTLKGMCPLNTPQQALD-TPAVVTCFLAVPVIKKNSYLVLA 1644
>BC146769-1|AAI46770.1| 1369|Homo sapiens LRRK1 protein protein.
Length = 1369
Score = 28.7 bits (61), Expect = 8.4
Identities = 19/49 (38%), Positives = 25/49 (51%)
Frame = -1
Query: 337 TYDQR*NKRTLKGQCVLHTQLYKLDGANRVVLCMI**PPQKRNKMNLIA 191
T DQ+ TLKG C L+T LD VV C + P K+N ++A
Sbjct: 952 TEDQKIYIYTLKGMCPLNTPQQALD-TPAVVTCFLAVPVIKKNSYLVLA 999
>BC066655-1|AAH66655.1| 439|Homo sapiens LRRK1 protein protein.
Length = 439
Score = 28.7 bits (61), Expect = 8.4
Identities = 19/49 (38%), Positives = 25/49 (51%)
Frame = -1
Query: 337 TYDQR*NKRTLKGQCVLHTQLYKLDGANRVVLCMI**PPQKRNKMNLIA 191
T DQ+ TLKG C L+T LD VV C + P K+N ++A
Sbjct: 22 TEDQKIYIYTLKGMCPLNTPQQALD-TPAVVTCFLAVPVIKKNSYLVLA 69
>BC005408-1|AAH05408.2| 659|Homo sapiens LRRK1 protein protein.
Length = 659
Score = 28.7 bits (61), Expect = 8.4
Identities = 19/49 (38%), Positives = 25/49 (51%)
Frame = -1
Query: 337 TYDQR*NKRTLKGQCVLHTQLYKLDGANRVVLCMI**PPQKRNKMNLIA 191
T DQ+ TLKG C L+T LD VV C + P K+N ++A
Sbjct: 274 TEDQKIYIYTLKGMCPLNTPQQALD-TPAVVTCFLAVPVIKKNSYLVLA 321
>AK131075-1|BAC85125.1| 1112|Homo sapiens FLJ00262 protein protein.
Length = 1112
Score = 28.7 bits (61), Expect = 8.4
Identities = 19/49 (38%), Positives = 25/49 (51%)
Frame = -1
Query: 337 TYDQR*NKRTLKGQCVLHTQLYKLDGANRVVLCMI**PPQKRNKMNLIA 191
T DQ+ TLKG C L+T LD VV C + P K+N ++A
Sbjct: 695 TEDQKIYIYTLKGMCPLNTPQQALD-TPAVVTCFLAVPVIKKNSYLVLA 742
>AB058693-1|BAB47419.1| 1369|Homo sapiens KIAA1790 protein protein.
Length = 1369
Score = 28.7 bits (61), Expect = 8.4
Identities = 19/49 (38%), Positives = 25/49 (51%)
Frame = -1
Query: 337 TYDQR*NKRTLKGQCVLHTQLYKLDGANRVVLCMI**PPQKRNKMNLIA 191
T DQ+ TLKG C L+T LD VV C + P K+N ++A
Sbjct: 952 TEDQKIYIYTLKGMCPLNTPQQALD-TPAVVTCFLAVPVIKKNSYLVLA 999
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,165,743
Number of Sequences: 237096
Number of extensions: 881286
Number of successful extensions: 1126
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1126
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3202085264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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