Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_P19
         (633 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.    23   6.1  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   8.1  
AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    23   8.1  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    23   8.1  
AF269153-1|AAF91398.1|  109|Anopheles gambiae labial homeotic pr...    23   8.1  

>AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.
          Length = 406

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -1

Query: 480 AGFSYSDANKAKGITWNDDTLFEYLENPKKYIP 382
           AG  Y+DA   KG+  + D  F  L N  K+ P
Sbjct: 50  AGKFYNDAEADKGLQTSQDARFYALSN--KFTP 80


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
 Frame = +1

Query: 262 KMLLMEFSI--TLKLLGSRFEIGXKVSTLICLLESSKHHLGSRD 387
           KMLL + +I     +  +   +G  ++ L+C  E++ H LG+ D
Sbjct: 478 KMLLQQGAIENAHSVHAANSNMGLHLNNLLCDAEATVHELGNFD 521


>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = +1

Query: 7   LTKLXSSLNHLTFNHSQHCQARXNYITQYIMYQVHMYSQ 123
           L KL SS        S  C     ++T    +QVH+Y++
Sbjct: 69  LKKLSSSYYLAALGISDTCYLVGLFVTWLSFFQVHIYTR 107


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 16/68 (23%), Positives = 31/68 (45%)
 Frame = -1

Query: 516 LHGFFGRKTGQAAGFSYSDANKAKGITWNDDTLFEYLENPKKYIPGTKMVFAGLKKANER 337
           L G F +K+G  +G S+  A KAK   W++  + +     +K     K V    ++  E 
Sbjct: 654 LDGTFYQKSGIISGGSHDLARKAK--RWDEKHMAQLKLQKEKITEELKEVMKKTRRQGEL 711

Query: 336 ADLXAYLK 313
             + + ++
Sbjct: 712 TTVESQIR 719


>AF269153-1|AAF91398.1|  109|Anopheles gambiae labial homeotic
           protein protein.
          Length = 109

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 10/32 (31%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
 Frame = -1

Query: 183 TIILKYLLVPNHNTIICSCCL*IHM--YLVHN 94
           T +L  L VPNH T++    +  H   ++++N
Sbjct: 21  TXVLDPLRVPNHTTVVAPSAVSPHQSSFMINN 52


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 665,811
Number of Sequences: 2352
Number of extensions: 13305
Number of successful extensions: 19
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61886940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)