Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_pT_P19
(633 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF038611-8|AAB92035.1| 111|Caenorhabditis elegans Hypothetical ... 142 2e-34
Z74046-2|CAA98555.1| 123|Caenorhabditis elegans Hypothetical pr... 137 7e-33
CU457743-1|CAM36364.1| 692|Caenorhabditis elegans Hypothetical ... 29 3.7
AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical ... 29 3.7
Z69794-1|CAA93679.2| 663|Caenorhabditis elegans Hypothetical pr... 28 4.8
U23521-5|AAC46813.2| 250|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z99281-52|CAB16507.3| 512|Caenorhabditis elegans Hypothetical p... 27 8.4
Z81109-2|CAB03244.1| 408|Caenorhabditis elegans Hypothetical pr... 27 8.4
U52070-1|AAD11527.1| 67|Caenorhabditis elegans dauer-upregulat... 27 8.4
U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical pr... 27 8.4
>AF038611-8|AAB92035.1| 111|Caenorhabditis elegans Hypothetical
protein E04A4.7 protein.
Length = 111
Score = 142 bits (343), Expect = 2e-34
Identities = 63/102 (61%), Positives = 76/102 (74%)
Frame = -1
Query: 618 VPAGNAXNGKKIFVQRCAQCHTVEAGGKHKVGPNLHGFFGRKTGQAAGFSYSDANKAKGI 439
+PAG+ GKK++ QRC QCH V++ K GP LHG GR +G +GF YS ANK KG+
Sbjct: 4 IPAGDYEKGKKVYKQRCLQCHVVDSTAT-KTGPTLHGVIGRTSGTVSGFDYSAANKNKGV 62
Query: 438 TWNDDTLFEYLENPKKYIPGTKMVFAGLKKANERADLXAYLK 313
W +TLFEYL NPKKYIPGTKMVFAGLKKA+ERADL Y++
Sbjct: 63 VWTRETLFEYLLNPKKYIPGTKMVFAGLKKADERADLIKYIE 104
>Z74046-2|CAA98555.1| 123|Caenorhabditis elegans Hypothetical
protein ZC116.2 protein.
Length = 123
Score = 137 bits (331), Expect = 7e-33
Identities = 62/102 (60%), Positives = 77/102 (75%)
Frame = -1
Query: 618 VPAGNAXNGKKIFVQRCAQCHTVEAGGKHKVGPNLHGFFGRKTGQAAGFSYSDANKAKGI 439
+P G+ GKKIF QRC QCH V + + K GP L+G GR++GQ AGF YS ANK KG+
Sbjct: 14 IPEGDNEKGKKIFKQRCEQCHVVNSL-QTKTGPTLNGVIGRQSGQVAGFDYSAANKNKGV 72
Query: 438 TWNDDTLFEYLENPKKYIPGTKMVFAGLKKANERADLXAYLK 313
W+ TLF+YL +PKKYIPGTKMVFAGLKKA+ERADL +++
Sbjct: 73 VWDRQTLFDYLADPKKYIPGTKMVFAGLKKADERADLIKFIE 114
>CU457743-1|CAM36364.1| 692|Caenorhabditis elegans Hypothetical
protein K09E10.1 protein.
Length = 692
Score = 28.7 bits (61), Expect = 3.7
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = -2
Query: 374 RWCLLDSRRQMSVLTX-LPISNLLPSNFKVIENSIRSI-FHNISG 246
+WCL S ++L L ISN L SNF V +++I+ I F N G
Sbjct: 369 KWCLNLSNINCALLIFFLFISNFLSSNFLVNKDAIQEIKFRNTPG 413
>AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical
protein F56E10.2 protein.
Length = 813
Score = 28.7 bits (61), Expect = 3.7
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 5/49 (10%)
Frame = -1
Query: 504 FGRKTGQAAGFSYSDANK---AKGITWNDDTLFEYLEN--PKKYIPGTK 373
FG++ G A GF + NK K ND L +L N KKY TK
Sbjct: 569 FGKRNGNAYGFEMASINKLADVKNALRNDRNLLHFLVNFIEKKYPDLTK 617
>Z69794-1|CAA93679.2| 663|Caenorhabditis elegans Hypothetical
protein R03G8.1 protein.
Length = 663
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1
Query: 1 KPLTKLXSSLNHLTFNHSQHCQAR 72
KPLTKL +S +TF H+ C+AR
Sbjct: 86 KPLTKLENSKWGVTFAHNLTCRAR 109
>U23521-5|AAC46813.2| 250|Caenorhabditis elegans Hypothetical
protein F41C3.6 protein.
Length = 250
Score = 27.9 bits (59), Expect = 6.4
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -2
Query: 338 VLTXLPISNLLPSNFKVIENSIRSIFHNISGIYFL 234
+L LP N + ++N ++SI HNI YFL
Sbjct: 10 LLLFLPQENRYFVELRSLKNLLKSILHNIENDYFL 44
>Z99281-52|CAB16507.3| 512|Caenorhabditis elegans Hypothetical
protein Y57G11C.5 protein.
Length = 512
Score = 27.5 bits (58), Expect = 8.4
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +2
Query: 539 PPASTVWHWAH 571
PP +++WHWAH
Sbjct: 310 PPMASLWHWAH 320
>Z81109-2|CAB03244.1| 408|Caenorhabditis elegans Hypothetical
protein R10D12.2 protein.
Length = 408
Score = 27.5 bits (58), Expect = 8.4
Identities = 9/30 (30%), Positives = 20/30 (66%)
Frame = +1
Query: 253 MLWKMLLMEFSITLKLLGSRFEIGXKVSTL 342
++WK+ +++FSITLK++ +G + +
Sbjct: 318 VIWKLGVVDFSITLKIVAQEHYLGVSAALI 347
>U52070-1|AAD11527.1| 67|Caenorhabditis elegans dauer-upregulated
gene protein.
Length = 67
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -2
Query: 593 ERKFLYNDVPSATLLKLVANTK*DRIYMDS 504
E+ + NDVPS LL++V DRI ++S
Sbjct: 21 EQMMVQNDVPSPPLLEVVRPRSRDRIMLES 50
>U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical protein
K10C2.1 protein.
Length = 2314
Score = 27.5 bits (58), Expect = 8.4
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -1
Query: 486 QAAGFSYSDANKAKGITWNDD 424
+ GFSY D N TW+DD
Sbjct: 1763 RGVGFSYQDKNVNNDTTWDDD 1783
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,274,432
Number of Sequences: 27780
Number of extensions: 297289
Number of successful extensions: 816
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 799
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 814
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1395683256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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