Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_P18
         (612 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein p...    25   2.5  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    24   4.4  
EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger pr...    23   5.9  

>AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein
           protein.
          Length = 499

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
 Frame = -1

Query: 216 CLEMKTYTPLCREKKRPKALRLYEPDVQEV-FTGSKGSKL-SREQAEAAR 73
           C+E +  T   R ++  KALR  + +  E   TG +  K  + E+AE A+
Sbjct: 150 CIERELLTMKLRAERAEKALREVQSEPPETPMTGKRSRKARTPEEAEDAK 199


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 11/40 (27%), Positives = 23/40 (57%)
 Frame = -3

Query: 268  PQEGGQYRFRSKSVHERVLRNENLHSVV*REKETQSFEVV 149
            PQE G+   + +   +++ RN N  ++V  E+E + ++ V
Sbjct: 960  PQEAGRKLKKLQDSKDKMSRNVNQKAMVLLEREEEQYKEV 999


>EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger
           protein.
          Length = 993

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 126 KPPAHPVHTTSKLW 167
           KPP +P+  T++LW
Sbjct: 408 KPPNNPLEKTNRLW 421


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 579,415
Number of Sequences: 2352
Number of extensions: 10716
Number of successful extensions: 25
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59711994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)