Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_P18
         (612 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024792-2|AAF60680.2|  813|Caenorhabditis elegans Hypothetical ...    38   0.007
Z69794-1|CAA93679.2|  663|Caenorhabditis elegans Hypothetical pr...    31   0.49 
Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical pr...    30   1.1  
AF026211-5|AAB71289.1|  288|Caenorhabditis elegans Hypothetical ...    28   6.0  
Z81457-6|CAE17710.1|  186|Caenorhabditis elegans Hypothetical pr...    27   8.0  
Z81055-3|CAB02892.2|  434|Caenorhabditis elegans Hypothetical pr...    27   8.0  
AC006632-4|AAK85475.1|  374|Caenorhabditis elegans Hypothetical ...    27   8.0  

>AC024792-2|AAF60680.2|  813|Caenorhabditis elegans Hypothetical
            protein Y48G1A.4 protein.
          Length = 813

 Score = 37.5 bits (83), Expect = 0.007
 Identities = 31/133 (23%), Positives = 59/133 (44%), Gaps = 1/133 (0%)
 Frame = -1

Query: 396  IRCLLISTVMLKEFFDNFNELEAQECMFEYHIKLLARIDTELYPKKVASIVSEVSQYMKE 217
            +R LL     L+  + N NE      +F+  +++L  I  +  P +V   +  +   MK 
Sbjct: 637  LRALLSLIQHLRVIYSNQNE--TYSIVFKPFLRILESIQAKNLPAEVQEELETLCASMKA 694

Query: 216  CLEMKT-YTPLCREKKRPKALRLYEPDVQEVFTGSKGSKLSREQAEAARLKTKLKKEMKG 40
             +  K     L   K     L++ EP  +  F   +     ++  E  +L   L+ E +G
Sbjct: 695  EIGAKCRLVHLSLVKTEKSMLKMLEPRFEWDFDPERPHHGPKD--EKKKLTKNLRNERRG 752

Query: 39   ALREIRRDKXYIA 1
            A++E+R+D  ++A
Sbjct: 753  AIKELRKDTAFLA 765


>Z69794-1|CAA93679.2|  663|Caenorhabditis elegans Hypothetical
           protein R03G8.1 protein.
          Length = 663

 Score = 31.5 bits (68), Expect = 0.49
 Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
 Frame = -1

Query: 261 KVASIVSEVSQYMK--ECLEMKTYTPLCREKKRPK 163
           K+ S V  V  Y K  +C+E +T+ P+C  K++PK
Sbjct: 615 KIVSKVERVDSYGKTADCIESETHRPICYCKEQPK 649


>Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical protein
            F35G12.8 protein.
          Length = 1549

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 18/77 (23%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
 Frame = -1

Query: 240  EVSQYMKECLEMKTYTPLCRE-KKRPKALRLYEPDVQEVFTGSKGSKLSREQAEAARLKT 64
            ++ +  K+C E+        E K + + +  +E  ++++ T  KG +++++Q+E +  +T
Sbjct: 960  DIEKMKKKCEELMEKAIDDEEVKSKKETVERFEKQIKKLQT--KGEEMTKKQSELSAAET 1017

Query: 63   KLKKEMKGALREIRRDK 13
            KL+ E+K     I+  K
Sbjct: 1018 KLEGELKKCSEGIKELK 1034


>AF026211-5|AAB71289.1|  288|Caenorhabditis elegans Hypothetical
           protein T13B5.5 protein.
          Length = 288

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 18/51 (35%), Positives = 26/51 (50%)
 Frame = +2

Query: 44  FISFFSLVFKRAASACSLDNLEPLLPVKTSCTSGSYNLKALGLFFSLHNGV 196
           FI   + + KR A    +D++ PLL  KTSC S  Y +    ++    NGV
Sbjct: 226 FIRDINAIDKRVA-LFHIDSIVPLLLQKTSCGSDPYTIPYSKVYEYDFNGV 275


>Z81457-6|CAE17710.1|  186|Caenorhabditis elegans Hypothetical
           protein C01G12.9 protein.
          Length = 186

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 14/55 (25%), Positives = 27/55 (49%)
 Frame = -1

Query: 177 KKRPKALRLYEPDVQEVFTGSKGSKLSREQAEAARLKTKLKKEMKGALREIRRDK 13
           KKR K L+  EPD +E+    +  ++ +EQA  +    KL  +    +++    +
Sbjct: 3   KKREKQLKRQEPDFKELTRKLEQLEMLQEQATQSSKSEKLPAQKNSEIQKAENQR 57


>Z81055-3|CAB02892.2|  434|Caenorhabditis elegans Hypothetical
           protein F01G10.3 protein.
          Length = 434

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 18/62 (29%), Positives = 31/62 (50%)
 Frame = -1

Query: 498 EKILNLNTDCSKMSVANKMAAKDLILESVDDDFKIRCLLISTVMLKEFFDNFNELEAQEC 319
           ++I  +N +    S  +K++  DLI+ESV +D K++         KE F N   +    C
Sbjct: 95  KRIEKINANLKITSDFHKLSNCDLIVESVIEDMKLK---------KELFANLENICKSTC 145

Query: 318 MF 313
           +F
Sbjct: 146 IF 147


>AC006632-4|AAK85475.1|  374|Caenorhabditis elegans Hypothetical
           protein F28A10.9 protein.
          Length = 374

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
 Frame = -1

Query: 588 NYLRGILYYCANTSILNQVQLVPPFMLHKME--KILNLNTDCSKMSVANKMAAKDLILES 415
           NY R  +Y+ +   ILNQ++L   F++  ++  K+L  N DC + S  NK+    + + S
Sbjct: 48  NYARIPVYHRSCIRILNQIKLPATFLIIDIDFLKLLE-NNDC-RWSSKNKI---KVAVNS 102

Query: 414 VDDDFKIRCLLISTVMLK 361
                 IR L + T+  K
Sbjct: 103 RHFHMNIRHLKLDTIYYK 120


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,872,868
Number of Sequences: 27780
Number of extensions: 266397
Number of successful extensions: 655
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 655
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)