Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_P17
         (771 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    23   4.2  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    22   5.5  

>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -1

Query: 441 SRRSEKNSQIGSMFIAPMKISTNIYQRKYCL 349
           +R +EK    G+   A   IST IY+ + CL
Sbjct: 618 TRSTEKRVSAGTP--AAFNISTTIYENQNCL 646


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = -3

Query: 751 DMSKRPFESYVTQFLTEKLEKFSILAYFRLCFMVGEYRLNFD 626
           D+SK  +ES V  +  ++ E + +L  +R        R N D
Sbjct: 244 DLSKDDYESLVHLYTRDQSETYDVLRSWRNLMDEHSNRTNSD 285


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,629
Number of Sequences: 438
Number of extensions: 4268
Number of successful extensions: 11
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24154023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)