Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_pT_P16
(797 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00006CCBE0 Cluster: Major Facilitator Superfamily pr... 36 1.6
UniRef50_Q11Y33 Cluster: Signal transduction histidine kinase; n... 36 1.6
UniRef50_A7TIN5 Cluster: Putative uncharacterized protein; n=1; ... 35 2.1
UniRef50_A2QSS6 Cluster: Putative uncharacterized protein; n=1; ... 35 2.1
UniRef50_Q05FQ2 Cluster: Putative uncharacterized protein; n=1; ... 35 2.7
UniRef50_P18015 Cluster: Copy number protein; n=1; Clostridium p... 34 3.6
UniRef50_A7B6I2 Cluster: Putative uncharacterized protein; n=1; ... 33 8.3
UniRef50_A5K144 Cluster: ATP-dependent RNA helicase, putative; n... 33 8.3
>UniRef50_UPI00006CCBE0 Cluster: Major Facilitator Superfamily
protein; n=2; Tetrahymena thermophila SB210|Rep: Major
Facilitator Superfamily protein - Tetrahymena thermophila
SB210
Length = 2225
Score = 35.5 bits (78), Expect = 1.6
Identities = 32/106 (30%), Positives = 44/106 (41%)
Frame = +3
Query: 291 NCLDLVILYSNYVILKKYFFMKFSQFIDFLNVLSPGKLNHHRYSKNLYS*KIEHSQFTTN 470
N D+ I SN+ IL + + V SP L +H Y Y I+H QF N
Sbjct: 2125 NACDIQINPSNHSILS--IIPDENMLSNDFTVQSPKTLINHMY----YLQNIKHQQFYLN 2178
Query: 471 QSTKTLTQRIYVSQKQNVHHYNKY*NKLN*QL*CKSLSKTKATINF 608
Q K QRI + KQN + Y + + K L + T+ F
Sbjct: 2179 QLAKFGIQRIIIYTKQNKNCKRSYLDSFLEENVSKQLKQNLKTVKF 2224
>UniRef50_Q11Y33 Cluster: Signal transduction histidine kinase; n=1;
Cytophaga hutchinsonii ATCC 33406|Rep: Signal
transduction histidine kinase - Cytophaga hutchinsonii
(strain ATCC 33406 / NCIMB 9469)
Length = 409
Score = 35.5 bits (78), Expect = 1.6
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = -3
Query: 345 NISLRLHNLNRVLLDLNNYINLFIYKKYLLFIS-V*FINIYLSTAYLFITYIEEKFTSKN 169
++ + L L + LN + L + +K LL IS V I LS+ YLF TY+EE +N
Sbjct: 119 HVHIGLSILLSQIFTLNEFKILNVEEKSLLLISNVNIILAILSSLYLFYTYVEENIAKEN 178
Query: 168 WYL 160
+ +
Sbjct: 179 YLI 181
>UniRef50_A7TIN5 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 723
Score = 35.1 bits (77), Expect = 2.1
Identities = 20/55 (36%), Positives = 32/55 (58%)
Frame = +2
Query: 314 LFKLCNLKEIFFHEIFTIYRFSQCFISG*IESSQILKKFVQLKDRTFSIYNKSIN 478
L K C++ +I F+E++ + R SQ I G + S+IL+KF + + N SIN
Sbjct: 332 LGKFCDIYKIHFNELYDLLRKSQTTIKGKLLRSEILQKFFLCCLLSLNNTNVSIN 386
>UniRef50_A2QSS6 Cluster: Putative uncharacterized protein; n=1;
Aspergillus niger|Rep: Putative uncharacterized protein
- Aspergillus niger
Length = 1053
Score = 35.1 bits (77), Expect = 2.1
Identities = 16/60 (26%), Positives = 33/60 (55%)
Frame = +3
Query: 318 SNYVILKKYFFMKFSQFIDFLNVLSPGKLNHHRYSKNLYS*KIEHSQFTTNQSTKTLTQR 497
+N I K + FM +DF ++S + HH ++ + ++ + +TT+Q +K L++R
Sbjct: 711 TNDGITKDFAFMSTDNALDFYTLVSASSITHHHHAVLTLTGEVASAVWTTHQPSKGLSRR 770
>UniRef50_Q05FQ2 Cluster: Putative uncharacterized protein; n=1;
Candidatus Carsonella ruddii PV|Rep: Putative
uncharacterized protein - Carsonella ruddii (strain PV)
Length = 405
Score = 34.7 bits (76), Expect = 2.7
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Frame = +3
Query: 258 INIFYK*ID*YNCLDLVILYSNYVILKKYFFMK---FSQFIDFLNVLSPGKLNHHRYSKN 428
+N+F+K N +L L +N++I K FF+K F ++FLN + K N + + N
Sbjct: 197 LNLFFKNYKKINYTNLFFLKNNFLI--KNFFLKKYIFVNKLNFLNSIKKNKKNCYNINYN 254
Query: 429 LYS*KI 446
+Y KI
Sbjct: 255 IYKNKI 260
>UniRef50_P18015 Cluster: Copy number protein; n=1; Clostridium
perfringens|Rep: Copy number protein - Clostridium
perfringens
Length = 198
Score = 34.3 bits (75), Expect = 3.6
Identities = 16/54 (29%), Positives = 32/54 (59%)
Frame = -3
Query: 324 NLNRVLLDLNNYINLFIYKKYLLFISV*FINIYLSTAYLFITYIEEKFTSKNWY 163
+L +++ LN + + + K++ +I + FI IY+ F+T I++K +KN Y
Sbjct: 86 SLQDLIISLNMFYQILSFSKFI-YIFIIFIIIYILFLSFFLTAIKKKLKNKNTY 138
>UniRef50_A7B6I2 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus gnavus ATCC 29149|Rep: Putative
uncharacterized protein - Ruminococcus gnavus ATCC 29149
Length = 448
Score = 33.1 bits (72), Expect = 8.3
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = -3
Query: 294 NYINLFIYKKYLLFISV*FINIYLSTAYLFITYIEEKFTSKNW 166
N +N +++K Y + + ++ LST Y IT++ KF SK +
Sbjct: 245 NGLNTYLFKDYFGNVQIMAVSGMLSTVYSIITFVGTKFVSKKF 287
>UniRef50_A5K144 Cluster: ATP-dependent RNA helicase, putative; n=2;
Plasmodium|Rep: ATP-dependent RNA helicase, putative -
Plasmodium vivax
Length = 1019
Score = 33.1 bits (72), Expect = 8.3
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = -3
Query: 309 LLDLNNYINLFIYKKYLLFISV*FINIYLSTAYLFITYIE 190
+L LNN +NLF+ KY++F ++ YL + F++YIE
Sbjct: 775 ILLLNNMVNLFL--KYIIFFTIENRETYLLSTKAFLSYIE 812
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 655,642,849
Number of Sequences: 1657284
Number of extensions: 11504988
Number of successful extensions: 28223
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 26906
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28210
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 68319938570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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