Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_P16
         (797 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    23   3.7  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   4.9  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    22   6.5  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    22   6.5  

>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 8/26 (30%), Positives = 17/26 (65%)
 Frame = -2

Query: 406 FNLPGDKTLRKSINCENFMKKYFFKI 329
           +N+   KTL+ SIN  + ++ + F++
Sbjct: 185 YNIASSKTLKLSINIISLVQLWIFQL 210


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -3

Query: 342 ISLRLHNLNRVLLDLNNYINLFIYKK 265
           I +R   LNRV+LD  +  +LF+ ++
Sbjct: 174 ILMRYKELNRVILDNMSRNHLFLVRR 199


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = +1

Query: 28  WSSQHKLCVPVFFFSV 75
           W ++ K+  P F FS+
Sbjct: 130 WQTRRKILTPAFHFSI 145


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = +1

Query: 28  WSSQHKLCVPVFFFSV 75
           W ++ K+  P F FS+
Sbjct: 130 WQTRRKILTPAFHFSI 145


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,486
Number of Sequences: 336
Number of extensions: 3461
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21687721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)