Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_pT_P15
(374 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0107 - 20883353-20883627,20883739-20883801,20884608-208847... 73 6e-14
08_01_0417 - 3692247-3692329,3692442-3692504,3693233-3693350,369... 72 1e-13
06_01_0108 - 860080-860162,860276-860338,860857-860974,861481-86... 64 5e-11
03_06_0582 - 34891613-34891795,34892407-34892466,34893134-348932... 43 9e-05
04_04_1623 - 34846056-34846223,34846547-34846644,34846738-348468... 42 1e-04
04_01_0396 + 5191653-5191874,5192281-5192396,5192891-5193455 29 1.2
03_01_0463 + 3551764-3551897,3551989-3552046,3552148-3552255,355... 29 1.2
11_06_0715 + 26552962-26553510,26553578-26555746 28 2.1
07_01_0703 - 5295561-5297523,5299344-5299462 28 2.1
01_05_0573 + 23359968-23361044,23361112-23361255,23361458-23361841 28 2.7
05_01_0479 - 3920992-3921513,3921643-3921756,3921905-3922482,392... 27 3.6
08_02_0818 - 21524539-21524664,21524911-21524961,21525800-215261... 27 4.8
03_05_0440 + 24322332-24322388,24323478-24323615,24323654-243237... 27 4.8
01_04_0143 + 16689471-16689498,16689687-16689818,16689974-166900... 27 4.8
07_03_0254 + 15857809-15858018,15858151-15858264,15859809-158600... 27 6.3
03_06_0051 + 31290431-31290610,31290727-31290849,31291771-312919... 27 6.3
01_07_0064 + 40834649-40834786,40834934-40834997,40835333-408353... 27 6.3
10_01_0307 + 3382432-3382608,3382690-3382863,3383600-3383695,338... 26 8.4
09_04_0689 - 19480409-19480599,19480780-19480889,19481032-194811... 26 8.4
08_02_0266 + 15051868-15052286,15052376-15052475,15053540-150535... 26 8.4
01_06_1208 + 35424241-35424370,35424415-35424728,35424782-354249... 26 8.4
>03_05_0107 -
20883353-20883627,20883739-20883801,20884608-20884725,
20885012-20885023
Length = 155
Score = 73.3 bits (172), Expect = 6e-14
Identities = 34/87 (39%), Positives = 53/87 (60%), Gaps = 2/87 (2%)
Frame = -1
Query: 314 MSLDEQFKQVADKVRNWKTKPSDDENLALYSLYKQATIGDVNIAQPSGLV--ESAKWKAW 141
M L E F++ A+KV+ S+++ L LY LYKQAT+GDVN ++P + AKW AW
Sbjct: 1 MGLQEDFEEYAEKVKTLPESTSNEDKLILYGLYKQATVGDVNTSRPGIFAQRDRAKWDAW 60
Query: 140 NSRKGISQDDAKKQYIENAEKLHSKXA 60
+ +G S+++A YI ++L + A
Sbjct: 61 KAVEGKSKEEAMSDYITKVKQLQEEAA 87
>08_01_0417 -
3692247-3692329,3692442-3692504,3693233-3693350,
3694084-3694095
Length = 91
Score = 72.1 bits (169), Expect = 1e-13
Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 2/87 (2%)
Frame = -1
Query: 314 MSLDEQFKQVADKVRNWKTKPSDDENLALYSLYKQATIGDVNIAQPSGLV--ESAKWKAW 141
M L E F+Q A+K + S++ L LY LYKQAT+GDVN A+P + AKW AW
Sbjct: 1 MGLQEDFEQYAEKAKTLPESTSNENKLILYGLYKQATVGDVNTARPGIFAQRDRAKWDAW 60
Query: 140 NSRKGISQDDAKKQYIENAEKLHSKXA 60
+ +G S+++A YI ++L + A
Sbjct: 61 KAVEGKSKEEAMSDYITKVKQLLEEAA 87
>06_01_0108 -
860080-860162,860276-860338,860857-860974,861481-861492
Length = 91
Score = 63.7 bits (148), Expect = 5e-11
Identities = 30/82 (36%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Frame = -1
Query: 314 MSLDEQFKQVADKVRNWKTKPSDDENLALYSLYKQATIGDVNIAQPS--GLVESAKWKAW 141
M L E+F++ A+K + S+++ L LY LYKQAT+G V +P L + KW AW
Sbjct: 1 MGLQEEFEEFAEKAKTLPDTISNEDKLLLYGLYKQATVGPVTTGRPGIFNLKDRYKWDAW 60
Query: 140 NSRKGISQDDAKKQYIENAEKL 75
+ +G S+++A YI ++L
Sbjct: 61 KAVEGKSKEEAMADYITKVKQL 82
>03_06_0582 -
34891613-34891795,34892407-34892466,34893134-34893280,
34893502-34893657,34893745-34893828,34893907-34893995,
34894575-34894689,34894776-34894899,34895080-34895219,
34895868-34895929,34896042-34896108,34896185-34896295,
34896868-34896945,34897074-34897274,34897492-34897563,
34897630-34897693,34898084-34898154,34898328-34898474
Length = 656
Score = 42.7 bits (96), Expect = 9e-05
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Frame = -1
Query: 248 DDENLALYSLYKQATIGDVNIAQPSGL--VESAKWKAWNSRKGISQDDAKKQYIENAEK 78
+D L LY LY+QAT+G N+ +P VE +KW +W+ + +A + +++ E+
Sbjct: 37 NDVALLLYGLYQQATVGPCNVPKPRAWNPVEQSKWTSWHGLGSMPSAEAMRLFVKILEE 95
>04_04_1623 -
34846056-34846223,34846547-34846644,34846738-34846829,
34847096-34847202,34847385-34847490,34848108-34848547
Length = 336
Score = 42.3 bits (95), Expect = 1e-04
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = -1
Query: 260 TKPSDDENLALYSLYKQATIGDVNIAQPSG--LVESAKWKAWNSRKGISQDDAKKQYIEN 87
T + L LY LYK AT G QPS L AKW AW+ + ++A ++YI
Sbjct: 109 TSVPEQAQLQLYGLYKIATEGPCTAPQPSALKLKARAKWNAWHKLGAMPTEEAMQKYITV 168
Query: 86 AEKL 75
++L
Sbjct: 169 VDEL 172
>04_01_0396 + 5191653-5191874,5192281-5192396,5192891-5193455
Length = 300
Score = 29.1 bits (62), Expect = 1.2
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = -2
Query: 373 TVPIGTLQLPYLLISKDNT-KCLSTSNSNRSPIRLGTGRPSP 251
++ L + +L+IS NT K L++ S+ SP +LG G P P
Sbjct: 114 SISASLLGIIFLIISLRNTNKGLTSLQSSSSPTKLGDGLPLP 155
>03_01_0463 +
3551764-3551897,3551989-3552046,3552148-3552255,
3552664-3552721,3552788-3553014,3553085-3553145,
3553311-3553615
Length = 316
Score = 29.1 bits (62), Expect = 1.2
Identities = 20/93 (21%), Positives = 39/93 (41%)
Frame = -1
Query: 347 TLPPDLKR*HKMSLDEQFKQVADKVRNWKTKPSDDENLALYSLYKQATIGDVNIAQPSGL 168
T+ PD + DE + A++ + KP+ + +SLY AT ++ +
Sbjct: 189 TVFPDAEARLSQPKDETWSDCAEQ--GFAVKPTKGSAVLFFSLYPNATFDPGSLHGSCPV 246
Query: 167 VESAKWKAWNSRKGISQDDAKKQYIENAEKLHS 69
++ KW A S D+ ++ + E H+
Sbjct: 247 IQGEKWSATKWIHVRSYDENGRRSSDKCEDQHA 279
>11_06_0715 + 26552962-26553510,26553578-26555746
Length = 905
Score = 28.3 bits (60), Expect = 2.1
Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 3/32 (9%)
Frame = +3
Query: 213 LVQGVQRKVLIVTGLGLP---VPNLIGDLFEL 299
LV G R + ++ +GLP +PN+IGDLF L
Sbjct: 560 LVAGKCRYMSVLELIGLPKDNIPNVIGDLFNL 591
>07_01_0703 - 5295561-5297523,5299344-5299462
Length = 693
Score = 28.3 bits (60), Expect = 2.1
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +1
Query: 217 YREYSARFSSSLGLVFQFLTLSAT--CLNCSSRDILCYLLRSGGR 345
+RE A+ + +G + Q L+ C NCS +L L +S GR
Sbjct: 454 FREDDAQLAEEIGDLVQLRVLNVVLNCSNCSEAKVLTELAKSMGR 498
>01_05_0573 + 23359968-23361044,23361112-23361255,23361458-23361841
Length = 534
Score = 27.9 bits (59), Expect = 2.7
Identities = 19/62 (30%), Positives = 28/62 (45%)
Frame = +1
Query: 130 LRLFHAFHLALSTRPLGWAMLTSPMVACLYREYSARFSSSLGLVFQFLTLSATCLNCSSR 309
LR + +A+ R L + + SP++ CL YS R L L L C+ C +
Sbjct: 230 LRELGLYCVAMEDRDLDFVLANSPVLECLGIYYSQRQIVLLRLASHSLRCVQICM-CIAE 288
Query: 310 DI 315
DI
Sbjct: 289 DI 290
>05_01_0479 -
3920992-3921513,3921643-3921756,3921905-3922482,
3922709-3923067,3923132-3923205
Length = 548
Score = 27.5 bits (58), Expect = 3.6
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2
Query: 116 LGRCLCDCSMPSTWRSPQD 172
+ R CDC +W+SPQD
Sbjct: 188 ISRPFCDCMESFSWKSPQD 206
>08_02_0818 -
21524539-21524664,21524911-21524961,21525800-21526170,
21526497-21526852,21527926-21527996
Length = 324
Score = 27.1 bits (57), Expect = 4.8
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 4/32 (12%)
Frame = -1
Query: 287 VADKVRNWKTKP----SDDENLALYSLYKQAT 204
V D++ W P +D+EN + +LYK+AT
Sbjct: 241 VKDRIEEWYRPPWDRTADEENASFNALYKEAT 272
>03_05_0440 +
24322332-24322388,24323478-24323615,24323654-24323736,
24325038-24325128,24326091-24326189,24326356-24326418,
24327182-24327259,24329354-24329543,24329812-24330065,
24330159-24330531,24331193-24331276,24332085-24332371,
24332495-24332542,24333194-24333220,24333951-24333987,
24334063-24334250,24334343-24334521,24334595-24334877,
24335481-24335717,24335798-24335988,24336552-24336561,
24336844-24336984,24337073-24337288,24338437-24338727,
24338852-24339025
Length = 1272
Score = 27.1 bits (57), Expect = 4.8
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = -1
Query: 245 DENLALYSLYKQATIGDVNIAQPSGLVES 159
DE+ AL +L+ A + VNI QPS +VES
Sbjct: 476 DESSALDALHTLADLS-VNILQPSSIVES 503
>01_04_0143 +
16689471-16689498,16689687-16689818,16689974-16690013,
16690214-16690280,16690349-16690431,16690755-16690821,
16692741-16692821,16693696-16693791,16694172-16694198
Length = 206
Score = 27.1 bits (57), Expect = 4.8
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -1
Query: 266 WKTKPSDDENLALYSLYKQATIGDVNIAQ 180
WK S ++NLA +++Y T V++ Q
Sbjct: 138 WKVSRSSEQNLAFFAVYNMETTDIVSLYQ 166
>07_03_0254 +
15857809-15858018,15858151-15858264,15859809-15860010,
15860245-15860319,15860406-15860498,15860554-15860636,
15861067-15861180,15861632-15861746,15861840-15862030,
15862102-15862218,15862514-15862594,15862729-15862964,
15863219-15863258,15863393-15863968
Length = 748
Score = 26.6 bits (56), Expect = 6.3
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 5/46 (10%)
Frame = -3
Query: 138 QSQRHLPRRCQEAIHRKC-----GEAPLQXRYKLLLRIK*ISYLKL 16
+ +R P+RC++ ++ C G+ P+ KLL R+K ++YL L
Sbjct: 106 RDERSNPQRCRDTVYVGCGAGFGGDRPM-AALKLLERVKELNYLVL 150
>03_06_0051 +
31290431-31290610,31290727-31290849,31291771-31291928,
31292395-31292497,31293077-31293172,31293367-31293432,
31293500-31293619,31293905-31293991
Length = 310
Score = 26.6 bits (56), Expect = 6.3
Identities = 13/46 (28%), Positives = 20/46 (43%)
Frame = -1
Query: 281 DKVRNWKTKPSDDENLALYSLYKQATIGDVNIAQPSGLVESAKWKA 144
+K K KP + L YSL TI ++ +++ KW A
Sbjct: 254 EKCIGLKVKPRKGDGLLFYSLMVNGTIDPTSLHGSCPVIKGEKWVA 299
>01_07_0064 +
40834649-40834786,40834934-40834997,40835333-40835391,
40835602-40835677,40835775-40835846,40837641-40837728,
40838239-40838497,40838766-40839000,40839447-40839470,
40839910-40839997,40840110-40840300,40841082-40841322,
40841803-40842556
Length = 762
Score = 26.6 bits (56), Expect = 6.3
Identities = 16/59 (27%), Positives = 25/59 (42%)
Frame = -1
Query: 344 LPPDLKR*HKMSLDEQFKQVADKVRNWKTKPSDDENLALYSLYKQATIGDVNIAQPSGL 168
L P + K D FK+ D+V +W T D+ N+A Y + + P G+
Sbjct: 161 LSPRILEDFKAYADVCFKEFGDRVAHWIT--IDEPNVASIGSYDSGQLAPGRCSDPFGI 217
>10_01_0307 + 3382432-3382608,3382690-3382863,3383600-3383695,
3384640-3384709,3385878-3386002,3387128-3387268,
3387362-3387519,3387644-3387803,3390136-3390213,
3390326-3390385,3390473-3390528,3391886-3392090,
3394107-3394192,3394296-3394406,3394536-3394607,
3395453-3395538,3395730-3395878,3396107-3396250,
3396335-3396442,3396997-3397027,3397609-3397713,
3398283-3398407,3398807-3398950,3399073-3399177,
3400748-3400799,3401549-3401696,3401936-3402130,
3402404-3402647,3403152-3403259,3403887-3404034,
3405467-3405525,3405876-3405945,3407008-3407333,
3407666-3409204,3410526-3410733,3410870-3410906,
3411024-3411072,3411143-3411271
Length = 2025
Score = 26.2 bits (55), Expect = 8.4
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -1
Query: 374 DSTNWNLATTLPPDLKR*HKMSLDEQ 297
DS NWNL+ PP +K +M L+E+
Sbjct: 1756 DSPNWNLSFGCPPIIK--EEMKLNEE 1779
>09_04_0689 -
19480409-19480599,19480780-19480889,19481032-19481117,
19481410-19481523,19481697-19482066,19482216-19482346,
19482628-19482736,19482901-19483022,19483113-19483219,
19483447-19483551,19483654-19483812,19484071-19484126,
19484200-19484251,19486724-19486821,19487086-19487210
Length = 644
Score = 26.2 bits (55), Expect = 8.4
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +3
Query: 267 VPNLIGDLFELLVERHFVLSF 329
VP G+ ++LL E+HFVL +
Sbjct: 447 VPVTAGNFYKLLAEKHFVLLY 467
>08_02_0266 +
15051868-15052286,15052376-15052475,15053540-15053581,
15053734-15053930,15055412-15055508,15055604-15055699,
15056395-15056633,15056728-15056811,15056898-15057185,
15057658-15057718,15061093-15061362,15061663-15061722
Length = 650
Score = 26.2 bits (55), Expect = 8.4
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Frame = -3
Query: 186 CPAQRSCGERQVEGMEQSQRHLP--RRCQEAIHRKC 85
CP +Q+E Q+Q L RRC + H+KC
Sbjct: 359 CPVHWCFECKQIEDRSQTQLWLAVCRRCVRSYHKKC 394
>01_06_1208 +
35424241-35424370,35424415-35424728,35424782-35424967,
35425361-35425523,35425601-35425787,35425875-35426016
Length = 373
Score = 26.2 bits (55), Expect = 8.4
Identities = 21/81 (25%), Positives = 32/81 (39%)
Frame = -2
Query: 301 SNSNRSPIRLGTGRPSPVTMRTLRCTPCTSRLP*VMLTLPSPAVLWRAPSGRHGTVAKAS 122
+ S+RSP+ T +RL + L PA + A G HG AS
Sbjct: 52 AGSSRSPVFSSLVEDDGETRHLQALDGADTRLRLFQMDLLDPASITPAVDGAHGVFHLAS 111
Query: 121 PKTMPRSNTSKMRRSSTPXTL 59
P T+ T +++P T+
Sbjct: 112 PLTL--HPTQDPEATNSPFTI 130
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,180,668
Number of Sequences: 37544
Number of extensions: 249278
Number of successful extensions: 872
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 848
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 867
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 600754600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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