Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_pT_P15
(374 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003140-9|AAB54171.1| 86|Caenorhabditis elegans Acyl-coenzyme... 74 4e-14
Z68004-6|CAA91987.2| 116|Caenorhabditis elegans Hypothetical pr... 72 1e-13
Z46794-8|CAA86779.1| 385|Caenorhabditis elegans Hypothetical pr... 59 9e-10
U00063-1|AAK18960.1| 146|Caenorhabditis elegans Acyl-coenzyme a... 58 2e-09
AL023828-1|CAA19448.1| 115|Caenorhabditis elegans Hypothetical ... 56 1e-08
Z92826-2|CAB07319.1| 266|Caenorhabditis elegans Hypothetical pr... 50 4e-07
U27312-8|AAZ32809.1| 219|Caenorhabditis elegans Hypothetical pr... 45 2e-05
U28942-1|AAA68355.2| 441|Caenorhabditis elegans Hypothetical pr... 30 0.62
U41274-5|AAA82461.2| 571|Caenorhabditis elegans Nematode astaci... 29 1.1
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 28 1.9
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 28 1.9
AF026204-3|AAB71253.1| 424|Caenorhabditis elegans Hypothetical ... 28 2.5
AC024214-14|AAU87808.1| 644|Caenorhabditis elegans Hypothetical... 28 2.5
Z78419-3|CAB01701.2| 1632|Caenorhabditis elegans Hypothetical pr... 27 4.4
AF159143-1|AAF80367.1| 1632|Caenorhabditis elegans RNA-directed ... 27 4.4
Z81529-5|CAB04296.1| 288|Caenorhabditis elegans Hypothetical pr... 27 5.8
AF040661-9|AAG24214.1| 345|Caenorhabditis elegans Hypothetical ... 27 5.8
U97593-1|AAB52875.1| 715|Caenorhabditis elegans Hypothetical pr... 26 7.6
>AF003140-9|AAB54171.1| 86|Caenorhabditis elegans Acyl-coenzyme a
binding proteinprotein 1 protein.
Length = 86
Score = 73.7 bits (173), Expect = 4e-14
Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Frame = -1
Query: 296 FKQVADKVRNWKTKPSDDENLALYSLYKQATIGDVNIAQPS--GLVESAKWKAWNSRKGI 123
F A V+ KT PS+DE L LY+L+KQ T+GD +P L AKW AW+ +KG+
Sbjct: 5 FDDAAATVKTLKTSPSNDELLKLYALFKQGTVGDNTTDKPGMFDLKGKAKWSAWDEKKGL 64
Query: 122 SQDDAKKQYIENAEKLHSK 66
++DDA+K Y+ E+L +K
Sbjct: 65 AKDDAQKAYVALVEELIAK 83
>Z68004-6|CAA91987.2| 116|Caenorhabditis elegans Hypothetical
protein F47B10.7 protein.
Length = 116
Score = 72.1 bits (169), Expect = 1e-13
Identities = 37/91 (40%), Positives = 56/91 (61%), Gaps = 6/91 (6%)
Frame = -1
Query: 314 MSLDEQFKQVADKVRNW-KTKP---SDDENLALYSLYKQATIGDVNIAQPS--GLVESAK 153
MSL E+F + ++ KT P S+D+ L YSL+KQA+IGDVN +P ++E K
Sbjct: 1 MSLQEKFDAAVEIIQKLPKTGPVATSNDQKLTFYSLFKQASIGDVNTDRPGIFSIIERKK 60
Query: 152 WKAWNSRKGISQDDAKKQYIENAEKLHSKXA 60
W +W +G+SQD+AK++YI+ + K A
Sbjct: 61 WDSWKELEGVSQDEAKERYIKALNDMFDKIA 91
>Z46794-8|CAA86779.1| 385|Caenorhabditis elegans Hypothetical
protein R06F6.9 protein.
Length = 385
Score = 59.3 bits (137), Expect = 9e-10
Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Frame = -1
Query: 311 SLDEQFKQVADKVRNWKTKPSDDENLALYSLYKQATIGDVNIAQPS--GLVESAKWKAWN 138
S F++ ++ K +P +D L LY L+KQAT GDV +P V AK+ AWN
Sbjct: 24 SAQADFEKAQKNLKTLKEEPDNDVKLQLYGLFKQATAGDVQGKRPGMMDFVGRAKYDAWN 83
Query: 137 SRKGISQDDAKKQYIENAEKLHSKXA 60
+ KG +QD+A+ Y + L S+ A
Sbjct: 84 TLKGQTQDEARANYAKLVGGLISEEA 109
>U00063-1|AAK18960.1| 146|Caenorhabditis elegans Acyl-coenzyme a
binding proteinprotein 4 protein.
Length = 146
Score = 58.0 bits (134), Expect = 2e-09
Identities = 37/104 (35%), Positives = 54/104 (51%), Gaps = 7/104 (6%)
Frame = -1
Query: 311 SLDEQFKQVADKV----RNWKTKPSDDENLALYSLYKQATIGDVNIAQP--SGLVESAKW 150
SLDEQF+ + +N K S ++ L +YSLYKQAT G + QP + + KW
Sbjct: 4 SLDEQFEAAVWIINALPKNGPIKTSINDQLQMYSLYKQATSGKCDTIQPYFFQIEQRMKW 63
Query: 149 KAWNSRKGISQDDAKKQYIENAEKL-HSKXAINYYLELNKFPTL 21
AWN + + +AK QY+E KL + A + +E PT+
Sbjct: 64 NAWNQLGNMDEAEAKAQYVEKMLKLCNQAEAEHNLMEFLSDPTI 107
>AL023828-1|CAA19448.1| 115|Caenorhabditis elegans Hypothetical
protein Y17G7B.1 protein.
Length = 115
Score = 55.6 bits (128), Expect = 1e-08
Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Frame = -1
Query: 296 FKQVADKVRNWKTKPSDDENLALYSLYKQATIGDVN----IAQPSG-LVESAKWKAWNSR 132
F+ A+++R K++P+D E L LY+LYKQA GD+ P+G V K+ AW S+
Sbjct: 15 FEIAAEEMRRLKSEPTDRERLKLYALYKQALHGDIPNEDVYPVPAGDEVGRKKYAAWKSQ 74
Query: 131 KGISQDDAKKQYIENAEKLHSKXAIN 54
KG + + + Y+ AE++ K N
Sbjct: 75 KGANSEKCRADYVAIAEEMIKKYGRN 100
>Z92826-2|CAB07319.1| 266|Caenorhabditis elegans Hypothetical
protein C18D11.2 protein.
Length = 266
Score = 50.4 bits (115), Expect = 4e-07
Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Frame = -1
Query: 257 KPSDDENLALYSLYKQATIGDVNIAQPS--GLVESAKWKAWNSRKGISQDDAKKQYIEN 87
K S DE L Y+L+KQAT G ++ +PS + KW AWN ++ D+AK+ Y+++
Sbjct: 21 KTSTDEKLNFYALFKQATHGKCDLPKPSFYDIQGVYKWNAWNKLDNMTMDEAKQAYVDS 79
>U27312-8|AAZ32809.1| 219|Caenorhabditis elegans Hypothetical
protein F26A1.15 protein.
Length = 219
Score = 45.2 bits (102), Expect = 2e-05
Identities = 25/86 (29%), Positives = 48/86 (55%), Gaps = 17/86 (19%)
Frame = -1
Query: 230 LYSLYKQATIGDVNIAQPSGLV--------------ESAKWKAWNSRKGISQDDAKKQYI 93
++ LY+QA +GDVN+ + + + + KW AWN +G+++++A +QY+
Sbjct: 123 VWGLYQQAIVGDVNVPKLNYMEIDEGEKSWMWRWINGNEKWHAWNKCRGLTKEEASEQYV 182
Query: 92 ENAEKLH---SKXAINYYLELNKFPT 24
E +KL + IN+ +E++ PT
Sbjct: 183 EAVQKLKIDIQQLLINWKIEISNEPT 208
>U28942-1|AAA68355.2| 441|Caenorhabditis elegans Hypothetical
protein F56D3.1 protein.
Length = 441
Score = 29.9 bits (64), Expect = 0.62
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = -2
Query: 295 SNRSPIRLGTGRPSPVTMRTLRCTPCTSRLP*VMLTLPSPAVLWRAP 155
+ ++P + T RP P T T+R P P TLP + RAP
Sbjct: 110 TTQAPTTIRTTRPPPAT--TIRTIPFVQTTPATFATLPPAPAVTRAP 154
>U41274-5|AAA82461.2| 571|Caenorhabditis elegans Nematode astacin
protease protein15 protein.
Length = 571
Score = 29.1 bits (62), Expect = 1.1
Identities = 22/65 (33%), Positives = 31/65 (47%)
Frame = -2
Query: 262 RPSPVTMRTLRCTPCTSRLP*VMLTLPSPAVLWRAPSGRHGTVAKASPKTMPRSNTSKMR 83
+P P + R T T+R ++TLP + R+P+ T KA+P T S TS
Sbjct: 473 KPPPTEIPDNRPTVVTTR---PLVTLPPAVIRSRSPAPPVSTTTKAAPTT---STTSAAP 526
Query: 82 RSSTP 68
S TP
Sbjct: 527 YSPTP 531
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 28.3 bits (60), Expect = 1.9
Identities = 15/27 (55%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = -1
Query: 104 KQYIENAEKLHSKXAINY-YLELNKFP 27
KQ ++ AEKL+SK I+Y E NKFP
Sbjct: 317 KQTMQVAEKLYSKGFISYPRTETNKFP 343
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 28.3 bits (60), Expect = 1.9
Identities = 15/27 (55%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = -1
Query: 104 KQYIENAEKLHSKXAINY-YLELNKFP 27
KQ ++ AEKL+SK I+Y E NKFP
Sbjct: 317 KQTMQVAEKLYSKGFISYPRTETNKFP 343
>AF026204-3|AAB71253.1| 424|Caenorhabditis elegans Hypothetical
protein C30E1.8 protein.
Length = 424
Score = 27.9 bits (59), Expect = 2.5
Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = -1
Query: 218 YKQATIGDVNIAQPSGLVESAKWKAWNSRK-GISQDDAKKQYIENAEKLHSKXAINYYLE 42
Y T+GD + SG++ WN+ K G+ + KK + + +H+ ++
Sbjct: 75 YINTTLGDNELKNLSGVMYITSSHQWNNSKYGL---NIKKWNLSKSNPMHTNEGDLFFSS 131
Query: 41 LNKF 30
+NKF
Sbjct: 132 VNKF 135
>AC024214-14|AAU87808.1| 644|Caenorhabditis elegans Hypothetical
protein Y77E11A.12b protein.
Length = 644
Score = 27.9 bits (59), Expect = 2.5
Identities = 19/50 (38%), Positives = 23/50 (46%)
Frame = +3
Query: 129 FATVPCLPLGALHKTAGLGNVNITYGSLLVQGVQRKVLIVTGLGLPVPNL 278
+ +VP L LG + G N N LL QG +L GLG PNL
Sbjct: 7 YLSVPMLNLGQRRSSEGYLNAN----DLLSQGGGESLLDSAGLGTSQPNL 52
>Z78419-3|CAB01701.2| 1632|Caenorhabditis elegans Hypothetical
protein F26A3.3 protein.
Length = 1632
Score = 27.1 bits (57), Expect = 4.4
Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Frame = -1
Query: 281 DKVRNWK-----TKPSDDENLALYSLYKQATIGDVNIAQPSGLVESAKWKA 144
D +R W +KPSDD + +L +++ + I ++ P VE K+ +
Sbjct: 719 DNLRQWSISYNISKPSDDSSWSLNCMFRPSQIKFISKRHPRDQVEIVKYSS 769
>AF159143-1|AAF80367.1| 1632|Caenorhabditis elegans RNA-directed RNA
polymerase relatedEGO-1 protein.
Length = 1632
Score = 27.1 bits (57), Expect = 4.4
Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Frame = -1
Query: 281 DKVRNWK-----TKPSDDENLALYSLYKQATIGDVNIAQPSGLVESAKWKA 144
D +R W +KPSDD + +L +++ + I ++ P VE K+ +
Sbjct: 719 DNLRQWSISYNISKPSDDSSWSLNCMFRPSQIKFISKRHPRDQVEIVKYSS 769
>Z81529-5|CAB04296.1| 288|Caenorhabditis elegans Hypothetical
protein F35E8.7 protein.
Length = 288
Score = 26.6 bits (56), Expect = 5.8
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = -2
Query: 298 NSN-RSPIRLGTGRPSPVTMRTLRCTPCTSRLP*VMLTLPSPAVLWRAPSGRHGTVAKAS 122
N+N R + T P+ T P T+ P V+ T +PA + + TVA A+
Sbjct: 180 NANCRKTCKRCTSGPTATTSTAAPAAPTTTVAPAVVTTTAAPAAVTTTAAVTTTTVAAAA 239
Query: 121 PKTMPRSNTS 92
T + TS
Sbjct: 240 ATTTAAACTS 249
>AF040661-9|AAG24214.1| 345|Caenorhabditis elegans Hypothetical
protein W10G11.5 protein.
Length = 345
Score = 26.6 bits (56), Expect = 5.8
Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Frame = -2
Query: 340 LLISKDNTKCLSTSNSNRSPIRL-GTGRPSPVTMRTLRCTPCTSRLP*VMLTLPSPAVLW 164
+L + T +T + P + T P+ VT ++ T +++LP + T P P
Sbjct: 91 ILTTVTTTSTTTTVTTTPIPTTVTSTHIPTTVTTTSIPTTVPSTQLPTTVTTTPIPTTTT 150
Query: 163 RAPSGRHGTVAKASPKTMPR 104
R + K P T PR
Sbjct: 151 RKTTTTTLRPTKPRPMTKPR 170
>U97593-1|AAB52875.1| 715|Caenorhabditis elegans Hypothetical
protein C46G7.3 protein.
Length = 715
Score = 26.2 bits (55), Expect = 7.6
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -2
Query: 301 SNSNRSPIRLGTGRPSPVTMRTLRCTPCTSR 209
+N NR + G S + TL+CT C+ R
Sbjct: 645 ANDNRCAVCAGERHSSSMCYSTLKCTYCSGR 675
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,132,830
Number of Sequences: 27780
Number of extensions: 197687
Number of successful extensions: 696
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 674
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 690
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 546325158
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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