Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_pT_P13
(554 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39743-2|AAA80437.6| 310|Caenorhabditis elegans Carbonic anhydr... 79 3e-15
U41539-1|AAB52498.1| 246|Caenorhabditis elegans Carbonic anhydr... 60 1e-09
Z68118-4|CAD18873.1| 235|Caenorhabditis elegans Hypothetical pr... 55 3e-08
Z68118-3|CAA92190.2| 280|Caenorhabditis elegans Hypothetical pr... 55 3e-08
AF000198-1|AAB53054.1| 319|Caenorhabditis elegans Carbonic anhy... 53 1e-07
U12966-4|AAA20616.1| 365|Caenorhabditis elegans Carbonic anhydr... 44 6e-05
U23517-10|AAB93341.3| 337|Caenorhabditis elegans Carbonic anhyd... 39 0.003
U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog (hedg... 31 0.42
U13644-7|AAM48536.2| 700|Caenorhabditis elegans Hypothetical pr... 31 0.42
U13644-6|AAB52678.1| 739|Caenorhabditis elegans Hypothetical pr... 31 0.42
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 30 0.97
U41035-2|AAM69088.1| 1371|Caenorhabditis elegans Uncoordinated p... 29 1.7
U41035-1|AAB37028.2| 1563|Caenorhabditis elegans Uncoordinated p... 29 1.7
AF257062-1|AAK49331.1| 1563|Caenorhabditis elegans Rab3-interact... 29 1.7
Z75710-9|CAB00024.2| 752|Caenorhabditis elegans Hypothetical pr... 29 2.2
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 29 2.2
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 29 2.2
U41994-8|AAK31524.1| 752|Caenorhabditis elegans Hypothetical pr... 28 3.9
Z22175-2|CAA80131.2| 520|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z11115-20|CAA77460.2| 520|Caenorhabditis elegans Hypothetical p... 28 5.2
AF047655-5|AAC04399.1| 820|Caenorhabditis elegans Hypothetical ... 27 6.9
AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase assoc... 27 6.9
AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase assoc... 27 6.9
>U39743-2|AAA80437.6| 310|Caenorhabditis elegans Carbonic anhydrase
protein 5 protein.
Length = 310
Score = 78.6 bits (185), Expect = 3e-15
Identities = 48/128 (37%), Positives = 68/128 (53%), Gaps = 1/128 (0%)
Frame = -3
Query: 546 EXMQHPDGLCVLAFFYQVVEFD-AKLLSPIVKNLTAIENFNSTLQLPHTFSLSSILSGLD 370
E + PDGL V+ F A SPI + L + + + +L + F +L LD
Sbjct: 154 EALSRPDGLAVVGVFLAKTNDPVANKFSPISERLHDLRHSGNKTELKN-FRTKYVLP-LD 211
Query: 369 TERFYTYKGSLTTPPCAEAVTWVIFSDYLPISVFQMDNFRGLLSNLNLPLVDNFRQLQPL 190
TE FY Y+GSLTTP C+EAV W + ++ + IS Q+ R L + + N+R LQPL
Sbjct: 212 TEAFYRYEGSLTTPDCSEAVIWTVLAEPMAISSHQLHLLRQLHNKELVKSDKNYRPLQPL 271
Query: 189 FGRRVFVR 166
GRR+ R
Sbjct: 272 NGRRIQYR 279
>U41539-1|AAB52498.1| 246|Caenorhabditis elegans Carbonic anhydrase
protein 3 protein.
Length = 246
Score = 59.7 bits (138), Expect = 1e-09
Identities = 38/124 (30%), Positives = 67/124 (54%)
Frame = -3
Query: 546 EXMQHPDGLCVLAFFYQVVEFDAKLLSPIVKNLTAIENFNSTLQLPHTFSLSSILSGLDT 367
+ ++ P L V+ F Q+ + + K LS + L + N + ++ + LS L +
Sbjct: 120 QGVEDPGKLAVVGVFLQLGK-EGKALSNEERVLGKLCNPETVTRVENV-RLSEKLPA-NK 176
Query: 366 ERFYTYKGSLTTPPCAEAVTWVIFSDYLPISVFQMDNFRGLLSNLNLPLVDNFRQLQPLF 187
F+ Y+GSLTTPPC+E VTW IF++ + ++ Q++ FR + P+ N+R Q L
Sbjct: 177 RSFWRYEGSLTTPPCSEIVTWTIFTEPVTVTHDQLELFRQVQDIEKRPIKKNYRPTQNLN 236
Query: 186 GRRV 175
R++
Sbjct: 237 DRKI 240
>Z68118-4|CAD18873.1| 235|Caenorhabditis elegans Hypothetical
protein R01E6.3b protein.
Length = 235
Score = 55.2 bits (127), Expect = 3e-08
Identities = 30/100 (30%), Positives = 50/100 (50%)
Frame = -3
Query: 540 MQHPDGLCVLAFFYQVVEFDAKLLSPIVKNLTAIENFNSTLQLPHTFSLSSILSGLDTER 361
+ PDGL V+ F + +++ I A N + + +P F + +L D
Sbjct: 116 LSKPDGLAVVGVFLKEGKYNDNYHGLIDTVRKATGNA-TPIAMPKDFHIEHLLPSPDKRE 174
Query: 360 FYTYKGSLTTPPCAEAVTWVIFSDYLPISVFQMDNFRGLL 241
F TY GSLTTPP E V W +F++ + +S Q++ R ++
Sbjct: 175 FVTYLGSLTTPPYNECVIWTLFTEPVEVSFGQLNVLRNII 214
>Z68118-3|CAA92190.2| 280|Caenorhabditis elegans Hypothetical
protein R01E6.3a protein.
Length = 280
Score = 55.2 bits (127), Expect = 3e-08
Identities = 30/100 (30%), Positives = 50/100 (50%)
Frame = -3
Query: 540 MQHPDGLCVLAFFYQVVEFDAKLLSPIVKNLTAIENFNSTLQLPHTFSLSSILSGLDTER 361
+ PDGL V+ F + +++ I A N + + +P F + +L D
Sbjct: 161 LSKPDGLAVVGVFLKEGKYNDNYHGLIDTVRKATGNA-TPIAMPKDFHIEHLLPSPDKRE 219
Query: 360 FYTYKGSLTTPPCAEAVTWVIFSDYLPISVFQMDNFRGLL 241
F TY GSLTTPP E V W +F++ + +S Q++ R ++
Sbjct: 220 FVTYLGSLTTPPYNECVIWTLFTEPVEVSFGQLNVLRNII 259
>AF000198-1|AAB53054.1| 319|Caenorhabditis elegans Carbonic
anhydrase protein 6 protein.
Length = 319
Score = 53.2 bits (122), Expect = 1e-07
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 1/101 (0%)
Frame = -3
Query: 549 AEXMQHPDGLCVLAFFYQVVEFDAKLLSPIVKNLTAIENFNSTLQLPHTFSLSSILSGLD 370
A+ ++ P+G+ +A F D + SP++ L + S +L +F + +
Sbjct: 172 ADALKQPNGVIAIAVFLNESHDDNAVFSPLINLLPQVIYKGSECKLC-SFDFQTFFPVAE 230
Query: 369 -TERFYTYKGSLTTPPCAEAVTWVIFSDYLPISVFQMDNFR 250
T+ F+ Y+GS TT P E V W++ LPIS Q+D R
Sbjct: 231 KTKEFWMYEGSETTDPFRETVNWIVIRAALPISSHQLDKLR 271
>U12966-4|AAA20616.1| 365|Caenorhabditis elegans Carbonic anhydrase
protein 1 protein.
Length = 365
Score = 44.4 bits (100), Expect = 6e-05
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Frame = -3
Query: 369 TERFYTYKGSLTTPPCAEAVTWVIFSDYLPISVFQMDNFRGLLSNL----NLPLVDNFRQ 202
T TY+GSLT+P C E VTW+I + + I + + L ++ +P+ NFR+
Sbjct: 284 TRDIITYEGSLTSPGCHETVTWIILNQPIFIKKEHFEEWSHLYLSMEGAEKVPVAPNFRK 343
Query: 201 LQPLFGRRVFVRITSK 154
+Q R V I K
Sbjct: 344 IQETNNRLVRTNIQHK 359
>U23517-10|AAB93341.3| 337|Caenorhabditis elegans Carbonic
anhydrase protein 2 protein.
Length = 337
Score = 38.7 bits (86), Expect = 0.003
Identities = 27/89 (30%), Positives = 42/89 (47%)
Frame = -3
Query: 540 MQHPDGLCVLAFFYQVVEFDAKLLSPIVKNLTAIENFNSTLQLPHTFSLSSILSGLDTER 361
M P GL ++ + + + L + +I T L F S++L T
Sbjct: 147 MTSPRGLLAVSVIVDIGKTTSVELRRLTVASQSINYKGQTTNLTD-FQPSALLP--KTSH 203
Query: 360 FYTYKGSLTTPPCAEAVTWVIFSDYLPIS 274
+ TY+GSLT P C E VTWVI ++ + I+
Sbjct: 204 YVTYEGSLTFPGCHETVTWVILNNPIYIT 232
>U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 6 protein.
Length = 559
Score = 31.5 bits (68), Expect = 0.42
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = -1
Query: 179 VSSSESHQRTLSSRRPNSTTPNGTGLDTRSPKMTSS 72
V+ + + R ++RRP +TTP T TR PK T++
Sbjct: 347 VTQAPTTPRATTTRRPTTTTPRPTPRRTRRPKTTTA 382
>U13644-7|AAM48536.2| 700|Caenorhabditis elegans Hypothetical
protein F56D2.6b protein.
Length = 700
Score = 31.5 bits (68), Expect = 0.42
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = +3
Query: 249 HGNYPFETRKWAGSQKRSPM*RLQHREEWSMILCTCRTFQCPSQTGLTTRRKYXXXXEWS 428
+ N PF R WA +KRS + +++E++ +L R QC + G T K +W+
Sbjct: 57 YNNQPFSNRYWAIWEKRSQLPVWEYKEKFMELL---RNNQCITLVGETGSGKTTQIPQWA 113
>U13644-6|AAB52678.1| 739|Caenorhabditis elegans Hypothetical
protein F56D2.6a protein.
Length = 739
Score = 31.5 bits (68), Expect = 0.42
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = +3
Query: 249 HGNYPFETRKWAGSQKRSPM*RLQHREEWSMILCTCRTFQCPSQTGLTTRRKYXXXXEWS 428
+ N PF R WA +KRS + +++E++ +L R QC + G T K +W+
Sbjct: 57 YNNQPFSNRYWAIWEKRSQLPVWEYKEKFMELL---RNNQCITLVGETGSGKTTQIPQWA 113
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 30.3 bits (65), Expect = 0.97
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = -1
Query: 215 ITSGSYNRCLVAVSSSESHQRTLSSRRPNSTTPNGTGLDTRSPKMTSSTS 66
+T GS S + S +S+ PN +T +G+ + T+SP + STS
Sbjct: 828 VTVGSTEASTSGSSVASSSPAPSTSQNPNPSTSSGSSMITQSPYPSQSTS 877
Score = 29.1 bits (62), Expect = 2.2
Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = -1
Query: 179 VSSSESHQRTLSSRRPN--STTPNGTGLDTRSPKMTSSTS 66
V SS S Q + S PN STTP+ T + SP M S+S
Sbjct: 590 VPSSSSPQPSSQSPAPNTGSTTPSQTSSQSPSPSMNPSSS 629
>U41035-2|AAM69088.1| 1371|Caenorhabditis elegans Uncoordinated
protein 10, isoform b protein.
Length = 1371
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = -1
Query: 164 SHQRTLSSRRPNSTTPNGTGLDTRSPKMTSSTSMNKYIYI 45
+ QRT ++R +T G G+ R P + +T MNKY ++
Sbjct: 334 NEQRTDNNRMRENTNGQG-GMFNRQPSLEQTTPMNKYNHV 372
>U41035-1|AAB37028.2| 1563|Caenorhabditis elegans Uncoordinated
protein 10, isoform a protein.
Length = 1563
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = -1
Query: 164 SHQRTLSSRRPNSTTPNGTGLDTRSPKMTSSTSMNKYIYI 45
+ QRT ++R +T G G+ R P + +T MNKY ++
Sbjct: 334 NEQRTDNNRMRENTNGQG-GMFNRQPSLEQTTPMNKYNHV 372
>AF257062-1|AAK49331.1| 1563|Caenorhabditis elegans Rab3-interacting
molecule UNC-10 protein.
Length = 1563
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = -1
Query: 164 SHQRTLSSRRPNSTTPNGTGLDTRSPKMTSSTSMNKYIYI 45
+ QRT ++R +T G G+ R P + +T MNKY ++
Sbjct: 334 NEQRTDNNRMRENTNGQG-GMFNRQPSLEQTTPMNKYNHV 372
>Z75710-9|CAB00024.2| 752|Caenorhabditis elegans Hypothetical
protein D1081.3 protein.
Length = 752
Score = 29.1 bits (62), Expect = 2.2
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = -1
Query: 182 AVSSSESHQRTLSSRRPNSTTPNGTGLDTRSPKMTSSTSMNKYIYIYPITTDK 24
A SSS + T NS+ PN ++T K ++TS + YI + PI K
Sbjct: 611 ASSSSNQPEATTQQIVQNSSDPNSPNVNTNPSKNRNTTSNSNYIEL-PIDEGK 662
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 29.1 bits (62), Expect = 2.2
Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = -1
Query: 179 VSSSESHQRTLSSRRPN--STTPNGTGLDTRSPKMTSSTS 66
V SS S Q + S PN STTP+ T + SP M S+S
Sbjct: 383 VPSSSSPQPSSQSPAPNTGSTTPSQTSSQSPSPSMNPSSS 422
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 29.1 bits (62), Expect = 2.2
Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = -1
Query: 179 VSSSESHQRTLSSRRPN--STTPNGTGLDTRSPKMTSSTS 66
V SS S Q + S PN STTP+ T + SP M S+S
Sbjct: 590 VPSSSSPQPSSQSPAPNTGSTTPSQTSSQSPSPSMNPSSS 629
>U41994-8|AAK31524.1| 752|Caenorhabditis elegans Hypothetical
protein F59A6.4 protein.
Length = 752
Score = 28.3 bits (60), Expect = 3.9
Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = -1
Query: 182 AVSSSESHQRTLSSRRPNSTTPNGTGLDTRS-PKMTSSTSMNK 57
AV++S++ S R TTPNG T+S K++++++MN+
Sbjct: 24 AVAASKARTPEGSGRGKKPTTPNGVANPTKSKTKVSTASTMNE 66
>Z22175-2|CAA80131.2| 520|Caenorhabditis elegans Hypothetical
protein ZK637.1 protein.
Length = 520
Score = 27.9 bits (59), Expect = 5.2
Identities = 19/71 (26%), Positives = 33/71 (46%)
Frame = -3
Query: 411 PHTFSLSSILSGLDTERFYTYKGSLTTPPCAEAVTWVIFSDYLPISVFQMDNFRGLLSNL 232
P + + GL T G++ TP A+ + S LPI ++ GL+++L
Sbjct: 448 PEVYPTTLRAVGLGTCSAMARIGAIVTPFIAQVASEKSLS--LPIGIYGTAAILGLIASL 505
Query: 231 NLPLVDNFRQL 199
+LP+ RQ+
Sbjct: 506 SLPIETKGRQM 516
>Z11115-20|CAA77460.2| 520|Caenorhabditis elegans Hypothetical
protein ZK637.1 protein.
Length = 520
Score = 27.9 bits (59), Expect = 5.2
Identities = 19/71 (26%), Positives = 33/71 (46%)
Frame = -3
Query: 411 PHTFSLSSILSGLDTERFYTYKGSLTTPPCAEAVTWVIFSDYLPISVFQMDNFRGLLSNL 232
P + + GL T G++ TP A+ + S LPI ++ GL+++L
Sbjct: 448 PEVYPTTLRAVGLGTCSAMARIGAIVTPFIAQVASEKSLS--LPIGIYGTAAILGLIASL 505
Query: 231 NLPLVDNFRQL 199
+LP+ RQ+
Sbjct: 506 SLPIETKGRQM 516
>AF047655-5|AAC04399.1| 820|Caenorhabditis elegans Hypothetical
protein C17B7.5 protein.
Length = 820
Score = 27.5 bits (58), Expect = 6.9
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 185 PNNGCNCLKLSTNGKLRLERRP 250
PN+ NC+ + TNG L+ E+ P
Sbjct: 383 PNSLDNCMDIPTNGSLQFEKPP 404
>AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase associated
protein homologprotein 1, isoform a protein.
Length = 1256
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -3
Query: 477 KLLSPIVKNLTAIENFNST-LQLPHTFSLSSILSGLDTERFYTYK 346
K+L+P++ L I NF T + PH L+S+ L + T K
Sbjct: 876 KMLTPVINLLGEINNFKDTKRKTPHWNHLNSVAEALPALGWVTVK 920
>AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase
associated protein homologprotein 1, isoform b protein.
Length = 495
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -3
Query: 477 KLLSPIVKNLTAIENFNST-LQLPHTFSLSSILSGLDTERFYTYK 346
K+L+P++ L I NF T + PH L+S+ L + T K
Sbjct: 115 KMLTPVINLLGEINNFKDTKRKTPHWNHLNSVAEALPALGWVTVK 159
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,912,071
Number of Sequences: 27780
Number of extensions: 278370
Number of successful extensions: 855
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 822
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 854
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1134321766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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