Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_P11
         (593 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    27   0.16 
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   7.8  

>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 26.6 bits (56), Expect = 0.16
 Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
 Frame = +2

Query: 161 FVFPLICPSPDGFLLFVLSLFYTK----V*VFYLSIEALRSLPGRLVINICLNKYLFQSV 328
           F+F LIC   D +L       Y K    +  F ++I  L  L   + +++C N Y++   
Sbjct: 16  FLFLLIC---DSYLKIYHKEKYRKFCRILKYFIIAIYVLTILTSSVTLHVCFNSYMYAFT 72

Query: 329 HSY 337
           H +
Sbjct: 73  HIF 75


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 7/23 (30%), Positives = 15/23 (65%)
 Frame = -1

Query: 173 KEKQNCYIYLIPSIFIFIYRLNL 105
           + ++N Y+ L+  +F+F Y + L
Sbjct: 131 ESERNDYVSLLQLVFVFCYFIYL 153


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,631
Number of Sequences: 336
Number of extensions: 2718
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14935063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)