Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_P10
         (616 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L20837-1|AAA03087.1|  192|Anopheles gambiae ribosomal protein S7...   306   4e-85
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    26   1.1  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    26   1.1  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    24   3.4  
U43500-1|AAA93303.1|  280|Anopheles gambiae a-CD36 protein.            23   7.8  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    23   7.8  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    23   7.8  

>L20837-1|AAA03087.1|  192|Anopheles gambiae ribosomal protein S7
           protein.
          Length = 192

 Score =  306 bits (751), Expect = 4e-85
 Identities = 145/188 (77%), Positives = 165/188 (87%)
 Frame = -2

Query: 579 TKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPM 400
           +K+IKA   E D+FET I QA++ELE NSDLK QLR+LYIT+A+E+E +NKK+IIIYVP+
Sbjct: 5   SKVIKAGNGEPDAFETQIGQAILELEMNSDLKPQLRDLYITRAREVEFNNKKAIIIYVPV 64

Query: 399 PKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVY 220
           PK KAFQK+Q RLVRELEKKFSGKHVVF+ +R+ILPKP    R  NKQKRPRS  +T+VY
Sbjct: 65  PKQKAFQKVQTRLVRELEKKFSGKHVVFIAERRILPKPMRGRRDPNKQKRPRSPNVTAVY 124

Query: 219 DAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSXYKKLTGREVT 40
           DAILEDLVFPAE+VGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTF S YKKLTGR+VT
Sbjct: 125 DAILEDLVFPAEVVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFASVYKKLTGRDVT 184

Query: 39  FEFPEPYL 16
           FEFPE YL
Sbjct: 185 FEFPENYL 192


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 20/57 (35%), Positives = 32/57 (56%)
 Frame = -2

Query: 234 LTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSXYK 64
           L S Y+ ++  +V  ++++  R+ +KL  SQLI V+L KNQ  T    V+     YK
Sbjct: 35  LLSNYNKLVRPVVNTSDVL--RVCIKLKLSQLIDVNL-KNQIMTTNLWVEQSWYDYK 88


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 20/57 (35%), Positives = 32/57 (56%)
 Frame = -2

Query: 234 LTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSXYK 64
           L S Y+ ++  +V  ++++  R+ +KL  SQLI V+L KNQ  T    V+     YK
Sbjct: 35  LLSNYNKLVRPVVNTSDVL--RVCIKLKLSQLIDVNL-KNQIMTTNLWVEQSWYDYK 88


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = +2

Query: 152 SNLTLMRLPTISAGKTKSSRIASYTEVNVLERGLFCLLATRVLWLGLGRIL 304
           +N  L+ +P  +   T SSR       +     L CLLAT V+W   G++L
Sbjct: 54  ANSRLVTVPAPAKELTDSSRSGGLPSSSS-SSSLSCLLATIVMWC-TGQVL 102


>U43500-1|AAA93303.1|  280|Anopheles gambiae a-CD36 protein.
          Length = 280

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +1

Query: 337 ELLFELTDKPDLDLLKGLQFRHRHIDDDR 423
           ELLFE    P LDLLK +     +I  D+
Sbjct: 96  ELLFEGVKDPLLDLLKTINSTSLNIPFDK 124


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 19/57 (33%), Positives = 30/57 (52%)
 Frame = -2

Query: 234 LTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSXYK 64
           L S Y+ ++  +V   + +   +++KL  SQLI V+L KNQ  T    V+     YK
Sbjct: 31  LLSNYNKLVRPVVNVTDAL--TVKIKLKLSQLIDVNL-KNQIMTTNLWVEQTWYDYK 84


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +2

Query: 11  VYK*GSGNSKVTSRPVSFLYXDWKV 85
           V K G G++  + RP+S L  D+K+
Sbjct: 507 VRKKGGGDAMSSIRPISLLNTDYKL 531


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 584,111
Number of Sequences: 2352
Number of extensions: 11506
Number of successful extensions: 37
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60132501
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)