Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_P08
         (364 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80025-1|AAD32271.1| 1064|Caenorhabditis elegans Hypothetical pr...    28   2.3  
U58749-10|AAK18879.1|  465|Caenorhabditis elegans Temporarily as...    27   3.0  
Z82082-7|CAE53735.1|   76|Caenorhabditis elegans Hypothetical pr...    27   5.3  
U23139-8|AAK31491.2| 1051|Caenorhabditis elegans Biotin protein ...    27   5.3  
Z81078-8|CAJ43906.1| 1071|Caenorhabditis elegans Hypothetical pr...    26   7.0  
Z81078-7|CAD92377.1| 1035|Caenorhabditis elegans Hypothetical pr...    26   7.0  
Z81078-6|CAB03079.2| 1074|Caenorhabditis elegans Hypothetical pr...    26   7.0  
AL132860-8|CAB60523.3|  278|Caenorhabditis elegans Hypothetical ...    26   7.0  
AL021466-5|CAJ43908.1| 1071|Caenorhabditis elegans Hypothetical ...    26   7.0  
AL021466-3|CAD92394.1| 1035|Caenorhabditis elegans Hypothetical ...    26   7.0  
AL021466-2|CAA16284.2| 1074|Caenorhabditis elegans Hypothetical ...    26   7.0  
U29488-3|AAA68772.1|  221|Caenorhabditis elegans Hypothetical pr...    26   9.3  

>U80025-1|AAD32271.1| 1064|Caenorhabditis elegans Hypothetical
           protein F02C9.3 protein.
          Length = 1064

 Score = 27.9 bits (59), Expect = 2.3
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +2

Query: 98  MPESS*TISLLRFSADISSMPQQSTAIV*ARCRPQ 202
           MP SS  I L  +  +++ +   STA+V  RC P+
Sbjct: 746 MPGSSLNICLQYYEEEVAELVCASTAVVCCRCSPE 780


>U58749-10|AAK18879.1|  465|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 224 protein.
          Length = 465

 Score = 27.5 bits (58), Expect = 3.0
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -2

Query: 213 SRRYCGRHLAQTMAVLCWGIDEM 145
           ++ YCGRH A  +   C G DE+
Sbjct: 321 NKYYCGRHYADQLYPRCAGCDEL 343


>Z82082-7|CAE53735.1|   76|Caenorhabditis elegans Hypothetical
           protein ZC334.10 protein.
          Length = 76

 Score = 26.6 bits (56), Expect = 5.3
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -2

Query: 216 GSRRYCGRHLAQTMAVLCWG 157
           G++R CGRHL   +  LC G
Sbjct: 23  GAQRRCGRHLVNFLEGLCGG 42


>U23139-8|AAK31491.2| 1051|Caenorhabditis elegans Biotin protein
           ligase protein 1,isoform a protein.
          Length = 1051

 Score = 26.6 bits (56), Expect = 5.3
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +2

Query: 56  MPRFLRASAGRSSGMPESS*TISLLRFSADISSMPQ 163
           +PR++R    R  G P +S T   +  S D +S+P+
Sbjct: 147 LPRYIRQLNQRDFGSPSNSITNGYIPDSVDFNSLPR 182


>Z81078-8|CAJ43906.1| 1071|Caenorhabditis elegans Hypothetical
           protein F36H2.1c protein.
          Length = 1071

 Score = 26.2 bits (55), Expect = 7.0
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +2

Query: 98  MPESS*TISLLRFSADISSMPQQSTAIV*ARCRPQ 202
           MP S+  + L  + A+++ +    TA+V  RC P+
Sbjct: 753 MPGSALNVCLQYYEAEVAELVCACTAVVCCRCSPE 787


>Z81078-7|CAD92377.1| 1035|Caenorhabditis elegans Hypothetical
           protein F36H2.1b protein.
          Length = 1035

 Score = 26.2 bits (55), Expect = 7.0
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +2

Query: 98  MPESS*TISLLRFSADISSMPQQSTAIV*ARCRPQ 202
           MP S+  + L  + A+++ +    TA+V  RC P+
Sbjct: 717 MPGSALNVCLQYYEAEVAELVCACTAVVCCRCSPE 751


>Z81078-6|CAB03079.2| 1074|Caenorhabditis elegans Hypothetical
           protein F36H2.1a protein.
          Length = 1074

 Score = 26.2 bits (55), Expect = 7.0
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +2

Query: 98  MPESS*TISLLRFSADISSMPQQSTAIV*ARCRPQ 202
           MP S+  + L  + A+++ +    TA+V  RC P+
Sbjct: 756 MPGSALNVCLQYYEAEVAELVCACTAVVCCRCSPE 790


>AL132860-8|CAB60523.3|  278|Caenorhabditis elegans Hypothetical
           protein Y56A3A.11 protein.
          Length = 278

 Score = 26.2 bits (55), Expect = 7.0
 Identities = 15/49 (30%), Positives = 27/49 (55%)
 Frame = -2

Query: 174 AVLCWGIDEMSAEKRNSDMVYEDSGMPELLPADARKKRGIIDECCLQAC 28
           A L  G+ E+  E   S +++E SG+ + L  + ++ RG+   C  Q+C
Sbjct: 41  AFLNGGLVEIFDETA-SRIIHEMSGIGQWLKDERKESRGVSRSCFSQSC 88


>AL021466-5|CAJ43908.1| 1071|Caenorhabditis elegans Hypothetical
           protein F36H2.1c protein.
          Length = 1071

 Score = 26.2 bits (55), Expect = 7.0
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +2

Query: 98  MPESS*TISLLRFSADISSMPQQSTAIV*ARCRPQ 202
           MP S+  + L  + A+++ +    TA+V  RC P+
Sbjct: 753 MPGSALNVCLQYYEAEVAELVCACTAVVCCRCSPE 787


>AL021466-3|CAD92394.1| 1035|Caenorhabditis elegans Hypothetical
           protein F36H2.1b protein.
          Length = 1035

 Score = 26.2 bits (55), Expect = 7.0
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +2

Query: 98  MPESS*TISLLRFSADISSMPQQSTAIV*ARCRPQ 202
           MP S+  + L  + A+++ +    TA+V  RC P+
Sbjct: 717 MPGSALNVCLQYYEAEVAELVCACTAVVCCRCSPE 751


>AL021466-2|CAA16284.2| 1074|Caenorhabditis elegans Hypothetical
           protein F36H2.1a protein.
          Length = 1074

 Score = 26.2 bits (55), Expect = 7.0
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +2

Query: 98  MPESS*TISLLRFSADISSMPQQSTAIV*ARCRPQ 202
           MP S+  + L  + A+++ +    TA+V  RC P+
Sbjct: 756 MPGSALNVCLQYYEAEVAELVCACTAVVCCRCSPE 790


>U29488-3|AAA68772.1|  221|Caenorhabditis elegans Hypothetical
           protein C56C10.4 protein.
          Length = 221

 Score = 25.8 bits (54), Expect = 9.3
 Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
 Frame = -2

Query: 192 HLAQT-MAVLCWGIDEMSAEKRNSDMVYEDSGMPELLPADARKKRGIIDECCLQACT 25
           H A T    + +G D  S  +R      + +  P  L     ++RG+ D  CLQ CT
Sbjct: 68  HAAGTHQGPILFGADRFSQFRRQQPPPSQQASDPNALFMQCCEQRGLPD-ACLQKCT 123


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,372,176
Number of Sequences: 27780
Number of extensions: 160877
Number of successful extensions: 509
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 485
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 509
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 503476126
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)