Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_P02
         (621 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7TIB5 Cluster: Putative uncharacterized protein; n=1; ...    38   0.19 
UniRef50_Q5KPL6 Cluster: Expressed protein; n=2; Filobasidiella ...    33   5.5  

>UniRef50_A7TIB5 Cluster: Putative uncharacterized protein; n=1;
           Vanderwaltozyma polyspora DSM 70294|Rep: Putative
           uncharacterized protein - Vanderwaltozyma polyspora DSM
           70294
          Length = 683

 Score = 37.9 bits (84), Expect = 0.19
 Identities = 30/81 (37%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
 Frame = -3

Query: 334 NKGSVLQYRLMAKFVPYVNIT*Q*QFKTQLH-DKKLICFGSYFFFIKQISKDYLVR-CSA 161
           NK S LQ   M   +   N     +F+TQ    +KL C G Y   +K + KD  +R C A
Sbjct: 66  NKNSPLQLSSMLHTMSLSN-----EFQTQPQPQQKLECQGPYVLKLKNLPKDITLRECHA 120

Query: 160 LFKLIINCFRSLQLSFEENKE 98
           +F L  N F +++L  EEN E
Sbjct: 121 VFALAEN-FSNIELIKEENSE 140


>UniRef50_Q5KPL6 Cluster: Expressed protein; n=2; Filobasidiella
           neoformans|Rep: Expressed protein - Cryptococcus
           neoformans (Filobasidiella neoformans)
          Length = 689

 Score = 33.1 bits (72), Expect = 5.5
 Identities = 17/35 (48%), Positives = 22/35 (62%)
 Frame = -3

Query: 613 ASTLRYRRTLRHRQ*SARSCFGIQSCHPPPHPINS 509
           A++ +  R+LRHR  S  S   IQS   PPHP+NS
Sbjct: 367 ATSSKAARSLRHRP-SNSSLRSIQSLRAPPHPLNS 400


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 449,031,322
Number of Sequences: 1657284
Number of extensions: 6687935
Number of successful extensions: 12242
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 12028
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12241
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 45221970467
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)