Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_P01
         (660 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061103-1|AAL28651.1|  400|Drosophila melanogaster LD09043p pro...    29   4.2  
AJ238397-1|CAB88669.1| 1476|Drosophila melanogaster chromatin ac...    29   4.2  
AF148962-1|AAD38952.1| 1476|Drosophila melanogaster ATP-dependen...    29   4.2  
AE014297-4813|AAF57200.1| 1476|Drosophila melanogaster CG1966-PA...    29   4.2  
X01472-2|CAA25702.1| 1058|Drosophila melanogaster protein ( Dros...    29   7.4  
AE014134-1652|AAF52785.1|  417|Drosophila melanogaster CG13114-P...    28   9.8  

>AY061103-1|AAL28651.1|  400|Drosophila melanogaster LD09043p
           protein.
          Length = 400

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -2

Query: 287 EISENYSDDDVTAYTDGLSNLVHETDLNDDDSITDNRSN 171
           E  E   DDD+T       N  H+ D+ DD+S+T   S+
Sbjct: 70  EEEEEKKDDDMTDEDAEHENEKHDEDVEDDESVTSTPSS 108


>AJ238397-1|CAB88669.1| 1476|Drosophila melanogaster chromatin
            accessibility complex(CHRAC) protein.
          Length = 1476

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -2

Query: 287  EISENYSDDDVTAYTDGLSNLVHETDLNDDDSITDNRSN 171
            E  E   DDD+T       N  H+ D+ DD+S+T   S+
Sbjct: 1146 EEEEEKKDDDMTDEDAEHENEKHDEDVEDDESVTSTPSS 1184


>AF148962-1|AAD38952.1| 1476|Drosophila melanogaster ATP-dependent
            chromatin assemblyfactor large subunit protein.
          Length = 1476

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -2

Query: 287  EISENYSDDDVTAYTDGLSNLVHETDLNDDDSITDNRSN 171
            E  E   DDD+T       N  H+ D+ DD+S+T   S+
Sbjct: 1146 EEEEEKKDDDMTDEDAEHENEKHDEDVEDDESVTSTPSS 1184


>AE014297-4813|AAF57200.1| 1476|Drosophila melanogaster CG1966-PA
            protein.
          Length = 1476

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -2

Query: 287  EISENYSDDDVTAYTDGLSNLVHETDLNDDDSITDNRSN 171
            E  E   DDD+T       N  H+ D+ DD+S+T   S+
Sbjct: 1146 EEEEEKKDDDMTDEDAEHENEKHDEDVEDDESVTSTPSS 1184


>X01472-2|CAA25702.1| 1058|Drosophila melanogaster protein (
           Drosophila melanogastercopia-like element 17.6. ).
          Length = 1058

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -1

Query: 414 RPGESSAVLENDRYKLRHLNGSSVQ 340
           +P + S +LE+D Y+L HLN    Q
Sbjct: 147 QPNKISPILESDLYRLEHLNNEEKQ 171


>AE014134-1652|AAF52785.1|  417|Drosophila melanogaster CG13114-PA
           protein.
          Length = 417

 Score = 28.3 bits (60), Expect = 9.8
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = +2

Query: 77  FPTPAPEVPELTDIVSLPADYVXCIAICGQKCCFYCQ 187
           +PT     P  TD  + P++Y  C   C   C  +C+
Sbjct: 63  YPTTTSAPPTPTDYTTQPSEYKKCYCECKLGCKEFCR 99


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,669,061
Number of Sequences: 53049
Number of extensions: 507551
Number of successful extensions: 1191
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1190
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2827453950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)