Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_O21
         (566 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    23   5.3  
AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    23   5.3  
AF487533-1|AAL93294.1|  531|Anopheles gambiae cytochrome P450 CY...    23   5.3  
EF519384-1|ABP68493.1|  506|Anopheles gambiae LRIM1 protein.           23   9.2  
EF519372-1|ABP68481.1|  506|Anopheles gambiae LRIM1 protein.           23   9.2  
EF519369-1|ABP68478.1|  506|Anopheles gambiae LRIM1 protein.           23   9.2  
AY214334-1|AAP69612.1|  519|Anopheles gambiae nicotinate phospho...    23   9.2  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    23   9.2  

>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +1

Query: 379 PPDGEWLPSPMEFSNARG 432
           PPD  W P  + F+NA G
Sbjct: 104 PPDKVWKPDIVLFNNADG 121


>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = +1

Query: 373 HGPPDGEWLPSPMEFSNARGRAK-PLPTEFFLHY 471
           H P +  WLP  + ++NA G  +  + T+  LH+
Sbjct: 99  HVPSEHIWLPDIVLYNNADGNYEVTIMTKAILHH 132


>AF487533-1|AAL93294.1|  531|Anopheles gambiae cytochrome P450
           CYP9K1 protein.
          Length = 531

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = +2

Query: 518 LFLEPDRFWALR 553
           LF EPDRFW  R
Sbjct: 439 LFPEPDRFWPER 450


>EF519384-1|ABP68493.1|  506|Anopheles gambiae LRIM1 protein.
          Length = 506

 Score = 22.6 bits (46), Expect = 9.2
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = -2

Query: 391 HHQVGRVLVCLQGQ*RKNIFFA 326
           ++ + RV  CL+GQ +KNI+ A
Sbjct: 130 NNNISRVS-CLRGQGKKNIYLA 150


>EF519372-1|ABP68481.1|  506|Anopheles gambiae LRIM1 protein.
          Length = 506

 Score = 22.6 bits (46), Expect = 9.2
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = -2

Query: 391 HHQVGRVLVCLQGQ*RKNIFFA 326
           ++ + RV  CL+GQ +KNI+ A
Sbjct: 130 NNNISRVS-CLRGQGKKNIYLA 150


>EF519369-1|ABP68478.1|  506|Anopheles gambiae LRIM1 protein.
          Length = 506

 Score = 22.6 bits (46), Expect = 9.2
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = -2

Query: 391 HHQVGRVLVCLQGQ*RKNIFFA 326
           ++ + RV  CL+GQ +KNI+ A
Sbjct: 130 NNNISRVS-CLRGQGKKNIYLA 150


>AY214334-1|AAP69612.1|  519|Anopheles gambiae nicotinate
           phosphoribosyltransferase-like protein protein.
          Length = 519

 Score = 22.6 bits (46), Expect = 9.2
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 194 IKKRVQISLNKFSNRHKKTNN 256
           +++RVQ SL      HK+T N
Sbjct: 469 VRERVQASLRTLRQDHKRTLN 489


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 22.6 bits (46), Expect = 9.2
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -3

Query: 465 KEEFGRQGLGSAPGIAELHG 406
           K E G QGL   PG A L+G
Sbjct: 505 KGEMGIQGLPGLPGPAGLNG 524


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 489,229
Number of Sequences: 2352
Number of extensions: 8315
Number of successful extensions: 26
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 53404389
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)