Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_O19
         (689 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0484 - 29401195-29401404,29401572-29401755,29401866-294039...    31   0.86 
11_01_0732 + 6065852-6066531,6067066-6067141,6067231-6067357,606...    31   1.1  
09_04_0040 - 14029565-14029810,14030904-14031182,14032056-14032832     30   2.0  
05_04_0308 - 20081366-20082404,20082702-20083078,20084293-200846...    30   2.0  
03_05_0825 - 27986393-27986767,27987541-27987625,27987936-279880...    28   6.1  
09_03_0011 - 11509759-11509906,11511131-11511426                       28   8.0  
02_05_0170 - 26431937-26434282                                         28   8.0  

>02_05_0484 -
           29401195-29401404,29401572-29401755,29401866-29403973,
           29404320-29404403,29404507-29404777,29404864-29405117,
           29405513-29405722,29406357-29406503
          Length = 1155

 Score = 31.1 bits (67), Expect = 0.86
 Identities = 28/109 (25%), Positives = 53/109 (48%), Gaps = 3/109 (2%)
 Frame = -2

Query: 688 QETQXMLEIDSDRRNIFSSLS---QEFLERRLKIEEEVNFLGTQKAIVFTQPEIIENDLE 518
           Q+   +++ + D R+    LS   Q   E + K+EE  N L T+   +    E ++ND +
Sbjct: 360 QKEADLVQREKDVRSSEEKLSKKEQVLNESKKKLEEWQNDLDTKSNALKKWEESLQNDEK 419

Query: 517 DLPDDFYELTIEEVRKLYKDLQQQRLKLENTPLMTSTKREEVEKELQHL 371
            L +   +L IE  R   K  +  +L+LE+       ++E++ +E  +L
Sbjct: 420 QLSEQ--KLQIENER---KQAEMYKLELESLKATVVAEKEKILQEQNNL 463


>11_01_0732 +
           6065852-6066531,6067066-6067141,6067231-6067357,
           6068084-6068289
          Length = 362

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 19/91 (20%), Positives = 43/91 (47%), Gaps = 9/91 (9%)
 Frame = -2

Query: 604 LKIEEEVNFLGTQKAIVFTQPEIIENDLEDLPDD---------FYELTIEEVRKLYKDLQ 452
           + +  E+ FL  Q  ++  + + ++  LE L  +          +E  I  +R LY+  Q
Sbjct: 256 IDVSAEMEFLSQQNIMLDLENKALKQRLESLAQEQLIKRFQQEMFEREIGRLRSLYQQQQ 315

Query: 451 QQRLKLENTPLMTSTKREEVEKELQHL*KKH 359
           QQ+ + + T  ++ +   +++ +  +L  KH
Sbjct: 316 QQQKQPQPTTTLSRSNSRDLDSQFANLSLKH 346


>09_04_0040 - 14029565-14029810,14030904-14031182,14032056-14032832
          Length = 433

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 15/41 (36%), Positives = 25/41 (60%)
 Frame = -2

Query: 517 DLPDDFYELTIEEVRKLYKDLQQQRLKLENTPLMTSTKREE 395
           DLPD FY L+ EE+R   K ++++RL+     +  S K ++
Sbjct: 275 DLPDSFYSLSNEEIRNEAK-MRRERLEQSRLLIPKSYKEKQ 314


>05_04_0308 -
           20081366-20082404,20082702-20083078,20084293-20084679,
           20085038-20086000
          Length = 921

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 27/113 (23%), Positives = 51/113 (45%), Gaps = 10/113 (8%)
 Frame = -2

Query: 685 ETQXMLEI-DSDRRNIFSSLSQEFLERRLKIEEEVNFLGTQKAIV-------FTQPEIIE 530
           E + ++E  D D    F+S  + FL+ R  +  +       + +V       F +P I +
Sbjct: 60  EVESLIETPDGDVEITFASKQKAFLQSRPSVSLDSRPRTKSQNVVYATYEDNFDEPSISD 119

Query: 529 NDLE--DLPDDFYELTIEEVRKLYKDLQQQRLKLENTPLMTSTKREEVEKELQ 377
            ++   +L DDF     EE  ++ K+L ++ ++L      T    EEV+K  +
Sbjct: 120 FNINVIELDDDFVIALEEEEFEIDKELLRREIRLPKNRTKTKRYLEEVDKSFR 172


>03_05_0825 -
           27986393-27986767,27987541-27987625,27987936-27988036,
           27988144-27988227,27988868-27988939,27989203-27989319,
           27989386-27989526,27989951-27990122,27990324-27990372,
           27990773-27990821,27991240-27991270,27991301-27991371
          Length = 448

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = -2

Query: 496 ELTIEEVRKLYKDLQQQRLKLENTPLMTSTKRE 398
           E T EE+R+  ++LQ+Q  ++E+T      K+E
Sbjct: 105 EKTAEEIRRELQELQRQHREVEDTEAKEDVKKE 137


>09_03_0011 - 11509759-11509906,11511131-11511426
          Length = 147

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = -1

Query: 269 YLKKEIYSNTTTSDAASILASKYRAPSRRKLEEIHNSH 156
           YL+ E  +  TTS+A S L S Y      KL E  N H
Sbjct: 103 YLRPEFPTFPTTSEAVSTLKSSYILRDNLKLIEGFNPH 140


>02_05_0170 - 26431937-26434282
          Length = 781

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 11/23 (47%), Positives = 18/23 (78%)
 Frame = -2

Query: 541 EIIENDLEDLPDDFYELTIEEVR 473
           EI+++ L+DL DDF+ L ++E R
Sbjct: 260 EIVQSILDDLGDDFFCLLVDESR 282


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,724,604
Number of Sequences: 37544
Number of extensions: 257580
Number of successful extensions: 821
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 821
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1756684372
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)