Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_pT_O19
(689 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily ass... 34 0.11
AL032637-13|CAA21615.1| 709|Caenorhabditis elegans Hypothetical... 32 0.44
U39848-1|AAT81210.1| 1338|Caenorhabditis elegans Latrophilin rec... 31 0.78
AY314772-1|AAQ84879.1| 1338|Caenorhabditis elegans latrophilin-l... 31 0.78
AF077534-2|AAC26284.1| 648|Caenorhabditis elegans Temporarily a... 31 0.78
AF077534-1|AAK71375.1| 1136|Caenorhabditis elegans Temporarily a... 31 0.78
Z46241-8|CAA86316.2| 1784|Caenorhabditis elegans Hypothetical pr... 29 2.4
AF068711-2|AAC17776.1| 414|Caenorhabditis elegans Hypothetical ... 29 2.4
AF016685-8|AAG24150.1| 340|Caenorhabditis elegans Seven tm rece... 29 3.1
Z81522-4|CAB04233.1| 771|Caenorhabditis elegans Hypothetical pr... 29 4.1
U64833-1|AAB04814.1| 857|Caenorhabditis elegans Hypothetical pr... 29 4.1
AL031633-20|CAC42372.2| 497|Caenorhabditis elegans Hypothetical... 29 4.1
AC024852-4|AAT81182.1| 794|Caenorhabditis elegans Conserved oli... 29 4.1
AB212858-1|BAE66673.1| 792|Caenorhabditis elegans COGC-3 protein. 29 4.1
Z71266-4|CAA95843.1| 478|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z71263-5|CAA95824.1| 356|Caenorhabditis elegans Hypothetical pr... 28 7.2
AF291847-1|AAK55964.1| 356|Caenorhabditis elegans heterotrimeri... 28 7.2
AF024503-13|AAG24083.1| 347|Caenorhabditis elegans Hypothetical... 28 7.2
Z71178-8|CAA94882.1| 552|Caenorhabditis elegans Hypothetical pr... 27 9.6
>U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily
assigned gene nameprotein 278 protein.
Length = 1130
Score = 33.9 bits (74), Expect = 0.11
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Frame = -2
Query: 613 ERRLKIEEEVNFLGTQKAIVFTQPEIIENDLED-LPDDFYE---LTIEEVRKLYKDLQQQ 446
E R E E+ L T+K+I+ + ++ +ED DD E +E+ +L + L++
Sbjct: 524 ELREASEIEIQALRTEKSILAAEIRVLTQKIEDEEQDDITEQLAKIVEDTSQLTRTLEEY 583
Query: 445 RLKLENTPLMTSTKREEVEKELQH 374
R ++ R+++EKE+ H
Sbjct: 584 RERITGKDAEILNLRKQLEKEISH 607
>AL032637-13|CAA21615.1| 709|Caenorhabditis elegans Hypothetical
protein Y43F8C.14 protein.
Length = 709
Score = 31.9 bits (69), Expect = 0.44
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -1
Query: 224 ASILASKYRAPSRRKLEEIHNSHTNSPTTXKSSKVPK 114
+ +L K P +++E + N H P T KSSK+P+
Sbjct: 59 SGMLEQKPPPPPTQRVESLENEHIAPPPTSKSSKIPE 95
>U39848-1|AAT81210.1| 1338|Caenorhabditis elegans Latrophilin receptor
protein 2 protein.
Length = 1338
Score = 31.1 bits (67), Expect = 0.78
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Frame = +1
Query: 286 SSNHLKCICTHGTNLASSKVIFGSNVSFRGVVTLSQPPLVLWTSLMGCFLTLIAVAVNLC 465
SSN +C CTH T+ A I G G + + + S +GC ++++ +A+++C
Sbjct: 862 SSNSSQCSCTHLTSFAILMDISGQVGRLSGGLASALDVV----STIGCAISIVCLALSVC 917
Query: 466 IIYVLPQW-----SIHRN 504
+ SIHRN
Sbjct: 918 VFTFFRNLQNVRNSIHRN 935
>AY314772-1|AAQ84879.1| 1338|Caenorhabditis elegans latrophilin-like
protein LAT-2 protein.
Length = 1338
Score = 31.1 bits (67), Expect = 0.78
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Frame = +1
Query: 286 SSNHLKCICTHGTNLASSKVIFGSNVSFRGVVTLSQPPLVLWTSLMGCFLTLIAVAVNLC 465
SSN +C CTH T+ A I G G + + + S +GC ++++ +A+++C
Sbjct: 862 SSNSSQCSCTHLTSFAILMDISGQVGRLSGGLASALDVV----STIGCAISIVCLALSVC 917
Query: 466 IIYVLPQW-----SIHRN 504
+ SIHRN
Sbjct: 918 VFTFFRNLQNVRNSIHRN 935
>AF077534-2|AAC26284.1| 648|Caenorhabditis elegans Temporarily
assigned gene nameprotein 218, isoform b protein.
Length = 648
Score = 31.1 bits (67), Expect = 0.78
Identities = 27/99 (27%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Frame = -2
Query: 661 DSDRRNIFSSL-SQEFLERRLKIEEEVNFLGTQKAIVFTQPEIIENDLEDLPDDFYELTI 485
DSDR+++FS++ + RL + E ++ ++ I + L D D +E+ I
Sbjct: 214 DSDRKHLFSNIFAVRDCSERLLCDLETRL---EENLILDD---ICDILSDHFDKHFEVYI 267
Query: 484 EEV-RKLYKDLQQQRLKLENTPLMTSTKREEVEKELQHL 371
+ ++Y+D +RLK EN +++ +R E K+ Q L
Sbjct: 268 KYCSNQVYQDRTLRRLKTENPGFLSAVQRLEENKQCQGL 306
>AF077534-1|AAK71375.1| 1136|Caenorhabditis elegans Temporarily
assigned gene nameprotein 218, isoform a protein.
Length = 1136
Score = 31.1 bits (67), Expect = 0.78
Identities = 27/99 (27%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Frame = -2
Query: 661 DSDRRNIFSSL-SQEFLERRLKIEEEVNFLGTQKAIVFTQPEIIENDLEDLPDDFYELTI 485
DSDR+++FS++ + RL + E ++ ++ I + L D D +E+ I
Sbjct: 702 DSDRKHLFSNIFAVRDCSERLLCDLETRL---EENLILDD---ICDILSDHFDKHFEVYI 755
Query: 484 EEV-RKLYKDLQQQRLKLENTPLMTSTKREEVEKELQHL 371
+ ++Y+D +RLK EN +++ +R E K+ Q L
Sbjct: 756 KYCSNQVYQDRTLRRLKTENPGFLSAVQRLEENKQCQGL 794
>Z46241-8|CAA86316.2| 1784|Caenorhabditis elegans Hypothetical protein
C38D4.3 protein.
Length = 1784
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Frame = -1
Query: 290 EESPDSLYLKKEIYSNTTTSDAASILASKYRAPSRRK----LEEIHNSHTNSPTTXKSSK 123
EE P S + NTT ++S LAS R SR++ + + ++PTT K +
Sbjct: 1576 EERPASRSTRSASVKNTTVDPSSSALASTKRTTSRKRGNSETIDFNQDDKSAPTTPKRGR 1635
Query: 122 VPK 114
K
Sbjct: 1636 PAK 1638
>AF068711-2|AAC17776.1| 414|Caenorhabditis elegans Hypothetical
protein R09A1.2 protein.
Length = 414
Score = 29.5 bits (63), Expect = 2.4
Identities = 21/70 (30%), Positives = 35/70 (50%)
Frame = -1
Query: 314 VHMHFKWLEESPDSLYLKKEIYSNTTTSDAASILASKYRAPSRRKLEEIHNSHTNSPTTX 135
V + K + SP ++ L S+ + D SIL Y + +R EEI + TN+ T
Sbjct: 187 VTANLKTIPHSPSTILL----ISDESVRDIVSILHDTY-STNRLSYEEILSLSTNTVITC 241
Query: 134 KSSKVPKWXK 105
S+++P + K
Sbjct: 242 LSARIPDFKK 251
>AF016685-8|AAG24150.1| 340|Caenorhabditis elegans Seven tm
receptor protein 85 protein.
Length = 340
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -2
Query: 571 TQKAIVFTQPEIIENDLEDLPDDFYELTIEEV 476
T K F Q E + N+L D +Y LT+EEV
Sbjct: 144 TVKYFAFPQKERLTNELRDDFSQYYNLTMEEV 175
>Z81522-4|CAB04233.1| 771|Caenorhabditis elegans Hypothetical
protein F32B4.4a protein.
Length = 771
Score = 28.7 bits (61), Expect = 4.1
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Frame = -2
Query: 616 LERRLKIEEEVNFLGTQKAIVFTQPEIIENDLEDLPDDFYELTIEEVR-KLYKDLQQQRL 440
+E K+EEEV L + V EI+ + EDL +D + IE+ K + +Q
Sbjct: 1 METEEKVEEEVIILNSSINNVSQDDEIVLDYEEDLLEDPLDEPIEQKEPKAAEPTPKQLQ 60
Query: 439 KLE-NTPLMTSTK 404
K+E +TP T +K
Sbjct: 61 KVEASTPQATPSK 73
>U64833-1|AAB04814.1| 857|Caenorhabditis elegans Hypothetical
protein B0507.6 protein.
Length = 857
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = -2
Query: 541 EIIENDLEDLPDDFYELTIEEVRKLYKDLQQQRLKLENTPLMTSTKREEVEKELQHL 371
E I N + D +D Y L E L + + +N +M + + E+VEK Q +
Sbjct: 395 EHITNGMADFKNDMYSLKRETESNLSEFMDTYNSDFKNFTIMGTERVEDVEKSEQQI 451
>AL031633-20|CAC42372.2| 497|Caenorhabditis elegans Hypothetical
protein Y39A1A.23 protein.
Length = 497
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/44 (36%), Positives = 30/44 (68%), Gaps = 4/44 (9%)
Frame = -2
Query: 496 ELTIEEVRKLYKDLQ--QQRLKLENTPLMTSTKREE--VEKELQ 377
E+T+ E R+ DLQ ++ ++++N P++T T +EE VE+ +Q
Sbjct: 365 EVTVYEQREPSPDLQIVEEVMEIDNQPIVTRTIKEEHSVEQAMQ 408
>AC024852-4|AAT81182.1| 794|Caenorhabditis elegans Conserved
oligomeric golgi (cog)component protein 3, isoform a
protein.
Length = 794
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/68 (25%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Frame = -2
Query: 565 KAIVFTQPEIIENDLEDLPDDFYEL---TIEEVRKLYKDLQQQRLKLENTPLMTSTKR-E 398
KA + PE +E+ D +D L +++++K KDL + + E T + ++ KR
Sbjct: 15 KAATWGLPEAVEDAESDTEEDVVGLISGALKDIKKREKDLAELQFPPEITAIRSNMKRFR 74
Query: 397 EVEKELQH 374
+++K++ +
Sbjct: 75 DLQKQIDN 82
>AB212858-1|BAE66673.1| 792|Caenorhabditis elegans COGC-3 protein.
Length = 792
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/68 (25%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Frame = -2
Query: 565 KAIVFTQPEIIENDLEDLPDDFYEL---TIEEVRKLYKDLQQQRLKLENTPLMTSTKR-E 398
KA + PE +E+ D +D L +++++K KDL + + E T + ++ KR
Sbjct: 15 KAATWGLPEAVEDAESDTEEDVVGLISGALKDIKKREKDLAELQFPPEITAIRSNMKRFR 74
Query: 397 EVEKELQH 374
+++K++ +
Sbjct: 75 DLQKQIDN 82
>Z71266-4|CAA95843.1| 478|Caenorhabditis elegans Hypothetical
protein R06C7.5a protein.
Length = 478
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = -2
Query: 649 RNIFSSLSQEFLERRLKIEEEVNFLGTQKAIVFTQPEIIE 530
+NIF LS + + +E+E+ FLG +KA++ E ++
Sbjct: 352 QNIFEGLSVQTDNVKKIVEDEIAFLGLEKAMMMLTEEGVD 391
>Z71263-5|CAA95824.1| 356|Caenorhabditis elegans Hypothetical
protein F52A8.2 protein.
Length = 356
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = -2
Query: 544 PEIIENDLEDLPDDFYELTIEEVRKLYKDLQQQRLKLENTPLMTSTKREEV 392
PE + + ++ E E +L K L Q+R KL + P+ + +R +V
Sbjct: 2 PENSQPTTTEKGSEYLEQLANEAEELRKKLDQERHKLNDIPIQQAAERLDV 52
>AF291847-1|AAK55964.1| 356|Caenorhabditis elegans heterotrimeric G
protein beta subunit2 protein.
Length = 356
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = -2
Query: 544 PEIIENDLEDLPDDFYELTIEEVRKLYKDLQQQRLKLENTPLMTSTKREEV 392
PE + + ++ E E +L K L Q+R KL + P+ + +R +V
Sbjct: 2 PENSQPTTTEKGSEYLEQLANEAEELRKKLDQERHKLNDIPIQQAAERLDV 52
>AF024503-13|AAG24083.1| 347|Caenorhabditis elegans Hypothetical
protein F31F4.15 protein.
Length = 347
Score = 27.9 bits (59), Expect = 7.2
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = -1
Query: 305 HFKWLEESPDSLYLKKEIYSNTTTSDAASILASKYRAPSRRKLEEIHNSHTN 150
HF +S +S++ K I+ + D SIL+ Y + LE IH HT+
Sbjct: 169 HFTKAFKSEESIHTKAMIFDRFSIRDTISILSRVY----AQTLENIHMWHTD 216
>Z71178-8|CAA94882.1| 552|Caenorhabditis elegans Hypothetical
protein B0024.10 protein.
Length = 552
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/41 (26%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Frame = -2
Query: 568 QKAIVFTQPEIIENDLEDLP-DDFYELTIEEVRKLYKDLQQ 449
++A+++ + ++ E + ++F+E+ IE+VR + KDL++
Sbjct: 332 RQAVIYKKRARVQTTDEPMETEEFFEVGIEDVRNMQKDLRK 372
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,579,521
Number of Sequences: 27780
Number of extensions: 257247
Number of successful extensions: 1074
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 974
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1072
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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