Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_O18
         (786 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052144-1|AAK93568.1|  947|Drosophila melanogaster SD10334p pro...    49   6e-06
AE014297-693|AAF54185.1|  947|Drosophila melanogaster CG2708-PA ...    49   6e-06

>AY052144-1|AAK93568.1|  947|Drosophila melanogaster SD10334p protein.
          Length = 947

 Score = 49.2 bits (112), Expect = 6e-06
 Identities = 27/65 (41%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
 Frame = -2

Query: 776  DFAAKVFETDIMEILMALXKLNDEAHIRANEYAQKCLNAAEDLGVIRKPEA**L--VFLR 603
            + A K+FETDIME+L  L +L D+   +A E A +CL AAE   +I + +   +  VF  
Sbjct: 878  EIAKKLFETDIMELLSGLGQLPDDTRAKAREVATQCLAAAERYRIIERSDNAEIPDVFAE 937

Query: 602  NSQIN 588
            NS+I+
Sbjct: 938  NSKIS 942


>AE014297-693|AAF54185.1|  947|Drosophila melanogaster CG2708-PA
            protein.
          Length = 947

 Score = 49.2 bits (112), Expect = 6e-06
 Identities = 27/65 (41%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
 Frame = -2

Query: 776  DFAAKVFETDIMEILMALXKLNDEAHIRANEYAQKCLNAAEDLGVIRKPEA**L--VFLR 603
            + A K+FETDIME+L  L +L D+   +A E A +CL AAE   +I + +   +  VF  
Sbjct: 878  EIAKKLFETDIMELLSGLGQLPDDTRAKAREVATQCLAAAERYRIIERSDNAEIPDVFAE 937

Query: 602  NSQIN 588
            NS+I+
Sbjct: 938  NSKIS 942


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,325,520
Number of Sequences: 53049
Number of extensions: 522986
Number of successful extensions: 1027
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 994
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1027
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3634208604
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)