Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_O17
         (719 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...   181   2e-47
AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein p...    27   0.44 
AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein p...    25   3.1  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    24   5.4  
AY028785-1|AAK32959.1|  509|Anopheles gambiae cytochrome P450 pr...    24   5.4  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    23   9.5  

>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score =  181 bits (441), Expect = 2e-47
 Identities = 86/123 (69%), Positives = 91/123 (73%)
 Frame = -1

Query: 719 YXRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXX 540
           Y RIEGD IVCAAYSHELPRYGVKVGLTNYAAAY TG                       
Sbjct: 66  YRRIEGDRIVCAAYSHELPRYGVKVGLTNYAAAYCTGLLVARRILQKLRLDTLYAGCTDV 125

Query: 539 XXDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDA 360
             +EY VEPVD GP AFRCYLDVGLARTTTG+RVFGAMKGAVDGGLN+PHS+KRFPGY A
Sbjct: 126 TGEEYLVEPVDEGPAAFRCYLDVGLARTTTGSRVFGAMKGAVDGGLNIPHSVKRFPGYSA 185

Query: 359 ESK 351
           E+K
Sbjct: 186 ENK 188



 Score =  108 bits (260), Expect = 1e-25
 Identities = 50/94 (53%), Positives = 65/94 (69%)
 Frame = -2

Query: 352 KKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAI 173
           K FNAE+HR HIFGLHVA YMR+LE++DE++FKRQFSKYI LG+ AD IE IYK AH +I
Sbjct: 188 KSFNAEMHRDHIFGLHVANYMRTLEEEDEEAFKRQFSKYISLGIKADDIENIYKNAHASI 247

Query: 172 RADPSHKKKELKKDSVKQKRWNKRKLTLAERKNR 71
           R  P  ++   ++      RW   +   A R++R
Sbjct: 248 RKIPPSRRNPRRRSPRSGGRWPSCRSPPARRRSR 281



 Score = 23.4 bits (48), Expect = 7.2
 Identities = 16/56 (28%), Positives = 21/56 (37%)
 Frame = -3

Query: 207 LKPSTRKPMKPSVRIHPXXXXXXXXXXXXXSAGTNAS*HWPRGKTESSKRRLPASR 40
           + PS R P + S R                S  T  +  WPR +  S  +RLP  R
Sbjct: 250 IPPSRRNPRRRSPRSGGRWPSCRSPPARRRSRSTRPT-SWPRSRPTSKPKRLPRRR 304


>AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein
           protein.
          Length = 455

 Score = 27.5 bits (58), Expect = 0.44
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = -2

Query: 205 EAIYKKAHEAIRADPSHKKKE 143
           +++Y+K  + +R DP+HK  E
Sbjct: 238 DSVYRKVRDTVRDDPAHKNLE 258


>AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein
           protein.
          Length = 429

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -2

Query: 205 EAIYKKAHEAIRADPSHK 152
           E +Y+   +AI+ DP+HK
Sbjct: 212 ETVYQMVKDAIKFDPAHK 229


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +2

Query: 407 HRQQHPS*LQRHEH 448
           H+QQHP   Q H H
Sbjct: 173 HQQQHPGHSQHHHH 186


>AY028785-1|AAK32959.1|  509|Anopheles gambiae cytochrome P450
           protein.
          Length = 509

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -2

Query: 571 LTPYTLAQQMSQVMNTMLNLSTMDQEHL 488
           LTP   + +M Q+  TML ++T    HL
Sbjct: 137 LTPTFTSGRMKQMFGTMLQVATELHRHL 164


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -2

Query: 64  QKKASCIKRLQASGGSLNA 8
           Q+ A C +R Q +GG+L+A
Sbjct: 865 QEDARCYQRQQEAGGALSA 883


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 704,807
Number of Sequences: 2352
Number of extensions: 13273
Number of successful extensions: 43
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)