Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_pT_O13
(765 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC18G6.06 |||U3 snoRNP-associated protein Utp11|Schizosaccharo... 31 0.14
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 30 0.42
SPAC17C9.11c |||zinc finger protein, zf-C2H2 type/UBA domain pro... 29 0.55
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 29 0.73
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 29 0.73
SPAC6B12.02c |mus7||DNA repair protein Mus7|Schizosaccharomyces ... 29 0.96
SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 28 1.7
SPAC343.12 |rds1||conserved fungal protein|Schizosaccharomyces p... 28 1.7
SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces p... 28 1.7
SPAC30C2.06c |dml1||mitochondrial genome maintenance protein |Sc... 28 1.7
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 27 2.2
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 27 2.2
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 27 2.2
SPCC1827.01c |||DUF1253 family protein|Schizosaccharomyces pombe... 27 3.9
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 27 3.9
SPBC16H5.09c |||alpha-1,2-mannosyltransferase |Schizosaccharomyc... 26 5.1
SPAC25A8.01c ||snf2SR|fun thirty related protein Fft3|Schizosacc... 26 5.1
SPAC15A10.11 |ubr11||N-end-recognizing protein |Schizosaccharomy... 26 5.1
SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces po... 26 6.8
SPBC1604.02c |||PPR repeat protein|Schizosaccharomyces pombe|chr... 26 6.8
SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ... 26 6.8
SPCC74.06 |mak3|phk2|histidine kinase Mak3 |Schizosaccharomyces ... 25 9.0
SPAP8A3.12c |||tripeptidylpeptidase |Schizosaccharomyces pombe|c... 25 9.0
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 25 9.0
>SPAC18G6.06 |||U3 snoRNP-associated protein
Utp11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 249
Score = 31.5 bits (68), Expect = 0.14
Identities = 26/113 (23%), Positives = 48/113 (42%), Gaps = 2/113 (1%)
Frame = -1
Query: 591 HEIQHENDKKQAELFKAESQDVDIDAVNKVTAQDFE-DAANEEYSKFKFGNLETDADKKG 415
HE+ H+ K L + E +D+D + + QD + + K +LE G
Sbjct: 66 HEMTHKKTKNGVPLEQREDSTIDMDTIKILKTQDIGWIRHHRNVERAKIDHLEQQMHTVG 125
Query: 414 DKTSTERCLQRHLVLVTQRKLGNDSKTLLPQGHWQEGETL-RQTAERIVKEQI 259
+ ++H + V K ++K+ P +Q + L +T R+ K+QI
Sbjct: 126 AHRNKNES-RKHTIFVDNVK---EAKSFNPAEFFQTTDDLVGRTENRVKKDQI 174
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 29.9 bits (64), Expect = 0.42
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
Frame = -1
Query: 675 VTPPLTEMQKKYKEFLFTVEFEKSMKSNHEIQHENDKKQAELFKAESQDVDIDAVNKVTA 496
++ L E+QK KE + + ++S + +QH +++ Q EL D+D T+
Sbjct: 715 ISSELIELQKDMKESYR--QLVQELRSLYNLQHTHEESQKELMYGVRNDIDALVKTCTTS 772
Query: 495 QDFEDAANEEY---SKFKFGNLETD 430
+ D +Y K KF + + D
Sbjct: 773 LNDADIILSDYISDQKSKFESKQQD 797
>SPAC17C9.11c |||zinc finger protein, zf-C2H2 type/UBA domain
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 240
Score = 29.5 bits (63), Expect = 0.55
Identities = 25/107 (23%), Positives = 49/107 (45%), Gaps = 1/107 (0%)
Frame = -1
Query: 651 QKKYKEFLFTVEFEKSMKSNHEIQHENDKKQAELFKAESQDVDIDAVNKVTAQDFEDAAN 472
+KK KE + +E EK K+N++I +++ + A+ + + + K+ Q EDA
Sbjct: 58 EKKEKERILALE-EK--KTNYKILQKSNDETAQAMRKMQDQARLRDLQKIRQQKAEDA-- 112
Query: 471 EEYSKFKFGNLETDADKK-GDKTSTERCLQRHLVLVTQRKLGNDSKT 334
E K +E D ++ ++ + ++ + Q K N S T
Sbjct: 113 -EQRKKILAEIERDKKRRAAERENKNSSVKETAAPIKQPKNANSSST 158
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 29.1 bits (62), Expect = 0.73
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = +2
Query: 413 SPFLSASVSKFPNLNFEYSSFAASSKSWAVTLLTASISTSWDSALKSSACFLS 571
SPF S S ++ SSF +SS S+ TL ++ S ++ SA F S
Sbjct: 292 SPFYSNSSVIPTSVPSSVSSFTSSSSSYTTTLTASNTSVTYTGTGTGSATFTS 344
Score = 25.8 bits (54), Expect = 6.8
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +2
Query: 416 PFLSASVSKFPNLNFEYSSFAASSKSWAVTLLTASISTSWDSALKSSACFLS 571
PF S S ++ SSF +S+ S+ TL ++ S ++ SA F S
Sbjct: 347 PFYSNSSVIPTSVPSSVSSFTSSNSSYTTTLTASNTSITYTGTGTGSATFTS 398
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 29.1 bits (62), Expect = 0.73
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = +2
Query: 413 SPFLSASVSKFPNLNFEYSSFAASSKSWAVTLLTASISTSWDSALKSSA 559
SP S S SKF + +F S+ ASS S + A +++ DS+ SSA
Sbjct: 211 SPSSSKSSSKFSSSSFITSTTPASSSSSGAIVSNAKTASTDDSSSASSA 259
>SPAC6B12.02c |mus7||DNA repair protein Mus7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1888
Score = 28.7 bits (61), Expect = 0.96
Identities = 20/68 (29%), Positives = 34/68 (50%)
Frame = -1
Query: 621 VEFEKSMKSNHEIQHENDKKQAELFKAESQDVDIDAVNKVTAQDFEDAANEEYSKFKFGN 442
V FEKS ++ E + E + K+ E+FK +D + +AV V +DF E+ + +
Sbjct: 76 VSFEKSDQNLAETKREEENKRTEVFK---KDAEHEAV--VVKRDFRPRRPEQTRPYTYDF 130
Query: 441 LETDADKK 418
L + K
Sbjct: 131 LRHQIEFK 138
>SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 395
Score = 27.9 bits (59), Expect = 1.7
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = -1
Query: 618 EFEKSMKSNHEIQHENDKKQAELFKAESQDVDID-AVNKVTAQDFE 484
E EK +K+ H++ + DKK EL K D+ D K A D E
Sbjct: 148 ELEKQVKTLHDLNEQKDKKIKEL-KERINDLTYDYETLKANADDSE 192
>SPAC343.12 |rds1||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 402
Score = 27.9 bits (59), Expect = 1.7
Identities = 11/48 (22%), Positives = 28/48 (58%)
Frame = +2
Query: 398 SVDVLSPFLSASVSKFPNLNFEYSSFAASSKSWAVTLLTASISTSWDS 541
S V + F + S ++PN + Y + ++++++ ++L S+ +WD+
Sbjct: 256 SPPVHTNFTNGSFPQYPNGTYMYPAAVSTNRTFPLSLPGQSVELAWDA 303
>SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 526
Score = 27.9 bits (59), Expect = 1.7
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = -1
Query: 576 ENDKKQAELFKAESQDVDIDAVN-KVTAQDFEDAANEEYSKFKFGNLETDADKKGDKTST 400
+ DK E E +D D+DAV+ K +D E E+ ++ +T K+ ++T
Sbjct: 31 DQDKNPEENVMNEKEDEDVDAVDEKSGEEDVEMDTMEDENENDEDTEQTSEKKETEETPK 90
Query: 399 ERCLQR 382
E L++
Sbjct: 91 ENPLEK 96
>SPAC30C2.06c |dml1||mitochondrial genome maintenance protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 465
Score = 27.9 bits (59), Expect = 1.7
Identities = 18/71 (25%), Positives = 33/71 (46%)
Frame = +2
Query: 353 NFRCVTRTRCRCKHRSVDVLSPFLSASVSKFPNLNFEYSSFAASSKSWAVTLLTASISTS 532
+F TR +R D+ S S NLNF+ ++ SSK WA+ + ++ +
Sbjct: 301 SFTLPTRVYGSSCYRMKDIESKLQSEGRGFIHNLNFKAKNY--SSKEWALVSSASFVNVA 358
Query: 533 WDSALKSSACF 565
D + +++ F
Sbjct: 359 QDYSQQNNCLF 369
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 27.5 bits (58), Expect = 2.2
Identities = 25/109 (22%), Positives = 49/109 (44%), Gaps = 6/109 (5%)
Frame = -1
Query: 663 LTEMQKKYKEFLFTVEFEKSMKSNHEIQHENDKKQ-----AEL-FKAESQDVDIDAVNKV 502
L +KK K+ + + FEKS N H+ D ++ A+L + + +++ +D + K
Sbjct: 445 LLNKEKKLKKSIEALSFEKSEAENSLSSHDIDSQKLNSEIADLSLRLQQEELSLDDIRKS 504
Query: 501 TAQDFEDAANEEYSKFKFGNLETDADKKGDKTSTERCLQRHLVLVTQRK 355
E +N K K + +K TS ++ LQ L ++ ++
Sbjct: 505 LQGKTEGISNAIEEKQK--AMAPALEKINQLTSEKQILQVELDMLLNKE 551
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 27.5 bits (58), Expect = 2.2
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = -1
Query: 486 EDAANEEYSKFKFGNLETDADKKGDKTSTERCLQRHLVLVTQRKLGNDSKTLLPQ 322
E+A NE+ ++ G + DK+ DKT+ E+ +TQ + DS L Q
Sbjct: 1095 EEALNEKLARL-VGEQMVEGDKEKDKTNEEKNKDEVKAEMTQPVVNQDSHDLQDQ 1148
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1919
Score = 27.5 bits (58), Expect = 2.2
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = -1
Query: 486 EDAANEEYSKFKFGNLETDADKKGDKTSTERCLQRHLVLVTQRKLGNDSKTLLPQ 322
E+A NE+ ++ G + DK+ DKT+ E+ +TQ + DS L Q
Sbjct: 1095 EEALNEKLARL-VGEQMVEGDKEKDKTNEEKNKDEVKAEMTQPVVNQDSHDLQDQ 1148
>SPCC1827.01c |||DUF1253 family protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 652
Score = 26.6 bits (56), Expect = 3.9
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = -1
Query: 657 EMQKKYKEFLFTVEFEKSMKSNHEIQHENDKKQAELF--KAESQDVDIDAVNKVTAQDFE 484
++QKK K E E M+ +E +END+++A + ESQD D + +++ E
Sbjct: 47 KVQKKNKVIESLNEMEVEMEDENE--NENDEQEAIQYYINVESQDAD-ETLHQEAQDSSE 103
Query: 483 DAANEEY 463
D ++ +
Sbjct: 104 DPFHQHF 110
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 26.6 bits (56), Expect = 3.9
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 584 ISWFDFMLFSNSTVNKNSLYFFCISVNGGVTTGNRXMQIP 703
I +F+F F+N+ N +S + + +S G+ T N Q P
Sbjct: 526 IPFFNFNSFNNNGANWSSDFNYPVSETSGLLTDNNRNQPP 565
>SPBC16H5.09c |||alpha-1,2-mannosyltransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 372
Score = 26.2 bits (55), Expect = 5.1
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2
Query: 350 PNFRCVTRTRCRCKHRSVDVLSPFLSASVSKFPNLNFE 463
P C + RC CK +D+ S S+ +++F NL E
Sbjct: 332 PLLHCPRKGRCFCKPEEIDLSSN--SSCIARFINLTNE 367
>SPAC25A8.01c ||snf2SR|fun thirty related protein
Fft3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 922
Score = 26.2 bits (55), Expect = 5.1
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 636 LYIFFAFQLTAELRLVTVQCKYPSI 710
LYIF Q +++ L + CK+PSI
Sbjct: 723 LYIFEDMQYMSDIELHNLCCKFPSI 747
>SPAC15A10.11 |ubr11||N-end-recognizing protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2052
Score = 26.2 bits (55), Expect = 5.1
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = -1
Query: 594 NHEIQHENDKKQAELFKAESQDVDIDAVNKVTAQDFEDAANEEY 463
+H + +ND F+ E +D+D D ++V + +AA +Y
Sbjct: 436 DHPLDDDNDVNDLLDFETEREDID-DLTDEVMETEENEAAEADY 478
>SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 401
Score = 25.8 bits (54), Expect = 6.8
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +3
Query: 267 P*LFFRQSDVVSRPPANAPEEVM-SLNHFLISVVSQELDVVVSI 395
P L F SD+ R A PE VM S+ HF ++ + L+ VV+I
Sbjct: 284 PELLFSPSDIEIR-EAGIPEAVMQSVTHFPENIQAMLLENVVTI 326
>SPBC1604.02c |||PPR repeat protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 697
Score = 25.8 bits (54), Expect = 6.8
Identities = 14/54 (25%), Positives = 27/54 (50%)
Frame = +2
Query: 539 SALKSSACFLSFSC*ISWFDFMLFSNSTVNKNSLYFFCISVNGGVTTGNRXMQI 700
S LK S C ++ +S+ ++ LF N + + +F+ I++N G N +
Sbjct: 432 STLKDSGC--DWNVGLSYLNW-LFVNKRITEAINFFYTITINAGTRPPNELFDV 482
>SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 3655
Score = 25.8 bits (54), Expect = 6.8
Identities = 14/45 (31%), Positives = 19/45 (42%)
Frame = +3
Query: 207 CRIHMEHSK*TLSEVQIRSAP*LFFRQSDVVSRPPANAPEEVMSL 341
C I +HS L + Q+ LFF D S P + VM +
Sbjct: 1134 CLIEQDHSSKWLFDRQVDILTALFFTLKDTTSEVPTVCKDHVMDV 1178
>SPCC74.06 |mak3|phk2|histidine kinase Mak3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 2344
Score = 25.4 bits (53), Expect = 9.0
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -1
Query: 420 KGDKTSTERCLQRHLVLVTQRKLGNDSKTL 331
KGDK S E C HL K+G + + L
Sbjct: 820 KGDKRSVEYCHYLHLAAEEALKIGANQEAL 849
>SPAP8A3.12c |||tripeptidylpeptidase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1274
Score = 25.4 bits (53), Expect = 9.0
Identities = 17/58 (29%), Positives = 30/58 (51%)
Frame = -1
Query: 534 QDVDIDAVNKVTAQDFEDAANEEYSKFKFGNLETDADKKGDKTSTERCLQRHLVLVTQ 361
Q ++ + +NK + +DA +EY+KFK E DK D T++ L+ + + Q
Sbjct: 191 QKLETEDMNKSNRKLLQDAT-DEYAKFKDKFPEAPLDK--DNLQTQKELEARIECLKQ 245
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 25.4 bits (53), Expect = 9.0
Identities = 15/50 (30%), Positives = 29/50 (58%)
Frame = +2
Query: 422 LSASVSKFPNLNFEYSSFAASSKSWAVTLLTASISTSWDSALKSSACFLS 571
+S SVS ++N YSS +S+ + T + +SI++S +++ S + S
Sbjct: 795 ISTSVSSQSSMNSSYSSPISSNSVTSSTSIISSIASSSYTSIPSISSIAS 844
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,760,155
Number of Sequences: 5004
Number of extensions: 54849
Number of successful extensions: 216
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 202
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 215
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 367316502
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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