Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_pT_O07
(788 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41544-2|AAA83184.1| 436|Caenorhabditis elegans Dehydrogenases,... 98 5e-21
Z48638-10|CAA88566.1| 118|Caenorhabditis elegans Hypothetical p... 74 1e-13
U28943-4|AAA68358.1| 298|Caenorhabditis elegans Hypothetical pr... 57 2e-08
AF025464-8|AAB71019.1| 714|Caenorhabditis elegans Hypothetical ... 32 0.54
Z68215-15|CAN86580.1| 1544|Caenorhabditis elegans Hypothetical p... 28 6.6
Z68215-11|CAH60786.1| 1301|Caenorhabditis elegans Hypothetical p... 28 6.6
Z68215-6|CAB54213.2| 1304|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z68215-5|CAA92456.1| 1586|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z68215-4|CAA92457.1| 1584|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z83226-2|CAB05723.1| 211|Caenorhabditis elegans Hypothetical pr... 28 8.8
Z82268-4|CAB05199.1| 741|Caenorhabditis elegans Hypothetical pr... 28 8.8
>U41544-2|AAA83184.1| 436|Caenorhabditis elegans Dehydrogenases,
short chain protein28 protein.
Length = 436
Score = 98.3 bits (234), Expect = 5e-21
Identities = 53/115 (46%), Positives = 75/115 (65%), Gaps = 3/115 (2%)
Frame = -1
Query: 587 LKSDALFAKIQDEVKKNPDKATTVGGVFLYNITDNGKTVKQWTLDLKS--PVVHDGAPKS 414
++S ALF ++ D VK +P T+ + LY ITD + ++TLD KS P V+ G K+
Sbjct: 319 IRSSALFQEMADGVKADPTAVKTLKSIVLYIITDGKNELGKFTLDFKSASPSVYLGDVKN 378
Query: 413 G-KADTTMTIADADLVQIASGALNPQVAYMKGKLKIAGNIMLAQKLGPLLKSDAK 252
G KA+ T+T+AD+D V IA+G LN Q A+M GKLK+ GN+ML QKL +L+ K
Sbjct: 379 GEKANATVTVADSDFVDIAAGKLNAQKAFMSGKLKVKGNVMLLQKLQTVLEKAKK 433
>Z48638-10|CAA88566.1| 118|Caenorhabditis elegans Hypothetical
protein ZK892.2 protein.
Length = 118
Score = 73.7 bits (173), Expect = 1e-13
Identities = 39/107 (36%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
Frame = -1
Query: 584 KSDALFAKIQDEVKKNPDKATTVGGVFLYNITD-NGKTVKQWTLDLKSPVVHDGAPKSGK 408
KSD +F +I++ + + + VG F I +GKT K WT+D KS + G S
Sbjct: 4 KSDVIFEEIKERIATDKEMVKKVGTSFRMTIAGADGKT-KVWTIDAKSDTPYVGDDSSRP 62
Query: 407 ADTTMTIADADLVQIASGALNPQVAYMKGKLKIAGNIMLAQKLGPLL 267
+ + I D+D + IA+G + P A+M+GK+K+ GNI A KL +L
Sbjct: 63 VEIEINIKDSDFIAIAAGKMKPDQAFMQGKMKLKGNIAKAMKLRTIL 109
>U28943-4|AAA68358.1| 298|Caenorhabditis elegans Hypothetical
protein E04F6.3 protein.
Length = 298
Score = 56.8 bits (131), Expect = 2e-08
Identities = 25/45 (55%), Positives = 30/45 (66%)
Frame = -1
Query: 788 KARXVKPVMPGETLVTEMWVEGKRVHFQTXTKXTGNTVIAGAYID 654
K R PV+PG+TLVTE W GKR+ FQ K TG VI+ A+ID
Sbjct: 236 KVRFSSPVLPGQTLVTETWKNGKRIIFQMKVKETGKIVISNAFID 280
>AF025464-8|AAB71019.1| 714|Caenorhabditis elegans Hypothetical
protein F53G2.1 protein.
Length = 714
Score = 31.9 bits (69), Expect = 0.54
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 530 CQDSFLLRLGFLQRVHHSLKCQTQWMVLLQMGT 628
C+ +L +GFLQ+ H S+ CQT + +L M T
Sbjct: 433 CEKIWLAAMGFLQKNHISVYCQTGVLTVLHMCT 465
>Z68215-15|CAN86580.1| 1544|Caenorhabditis elegans Hypothetical
protein C53B4.4e protein.
Length = 1544
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = -3
Query: 459 TRPQVPSCSRRSTEEWKGRYDYDNCRC*FSANCIWSSQSSSC 334
TRP P ++ +WK Y ++ C IW +SSC
Sbjct: 1203 TRPFSPPALSPASHDWKLWYGKNSTTCAMCRGKIWLRNASSC 1244
>Z68215-11|CAH60786.1| 1301|Caenorhabditis elegans Hypothetical
protein C53B4.4d protein.
Length = 1301
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = -3
Query: 459 TRPQVPSCSRRSTEEWKGRYDYDNCRC*FSANCIWSSQSSSC 334
TRP P ++ +WK Y ++ C IW +SSC
Sbjct: 923 TRPFSPPALSPASHDWKLWYGKNSTTCAMCRGKIWLRNASSC 964
>Z68215-6|CAB54213.2| 1304|Caenorhabditis elegans Hypothetical protein
C53B4.4c protein.
Length = 1304
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = -3
Query: 459 TRPQVPSCSRRSTEEWKGRYDYDNCRC*FSANCIWSSQSSSC 334
TRP P ++ +WK Y ++ C IW +SSC
Sbjct: 923 TRPFSPPALSPASHDWKLWYGKNSTTCAMCRGKIWLRNASSC 964
>Z68215-5|CAA92456.1| 1586|Caenorhabditis elegans Hypothetical protein
C53B4.4b protein.
Length = 1586
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = -3
Query: 459 TRPQVPSCSRRSTEEWKGRYDYDNCRC*FSANCIWSSQSSSC 334
TRP P ++ +WK Y ++ C IW +SSC
Sbjct: 1205 TRPFSPPALSPASHDWKLWYGKNSTTCAMCRGKIWLRNASSC 1246
>Z68215-4|CAA92457.1| 1584|Caenorhabditis elegans Hypothetical protein
C53B4.4a protein.
Length = 1584
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = -3
Query: 459 TRPQVPSCSRRSTEEWKGRYDYDNCRC*FSANCIWSSQSSSC 334
TRP P ++ +WK Y ++ C IW +SSC
Sbjct: 1203 TRPFSPPALSPASHDWKLWYGKNSTTCAMCRGKIWLRNASSC 1244
>Z83226-2|CAB05723.1| 211|Caenorhabditis elegans Hypothetical
protein F43D2.3 protein.
Length = 211
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -1
Query: 527 ATTVGGVFLYNITDNGKTVKQWTLDLK 447
A T + ++ T NGKT+ Q T+D+K
Sbjct: 148 APTANKIVVFGTTPNGKTMIQMTIDMK 174
>Z82268-4|CAB05199.1| 741|Caenorhabditis elegans Hypothetical
protein F52B11.3 protein.
Length = 741
Score = 27.9 bits (59), Expect = 8.8
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = -1
Query: 269 LKSDAKL*NYQFNYKEQFGCQGFCIGSFINFVI 171
+K++ + Y+FN + QFG C I F++
Sbjct: 369 IKANPSMDYYEFNCESQFGGMALCTNEGIRFIV 401
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,314,386
Number of Sequences: 27780
Number of extensions: 396452
Number of successful extensions: 869
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 868
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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