Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_pT_O06
(585 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0042 - 20443686-20443793,20444083-20444172,20444463-204445... 46 2e-05
03_05_0176 + 21546952-21547887,21548856-21548921,21549959-215508... 31 0.51
02_05_0232 + 27041793-27042087,27042822-27042943,27043098-270432... 30 1.6
01_03_0179 + 13500413-13500768,13502522-13502642,13502876-135029... 29 2.1
10_02_0066 + 4871759-4871857,4872086-4872511 29 2.7
01_05_0262 - 20137391-20137861,20137937-20138100,20138140-201382... 29 2.7
01_05_0662 - 24103475-24103735,24103831-24104085,24104280-241044... 29 3.6
07_01_1018 - 8664851-8665495,8665525-8665935,8666374-8666580 28 4.8
06_03_1475 - 30391555-30391890,30391982-30392233,30392358-303926... 28 4.8
04_03_0050 + 10161245-10161363,10161557-10161686,10161868-101624... 28 4.8
12_02_0547 - 20291895-20292043,20292339-20293164 28 6.3
10_03_0015 - 7079715-7079898,7080107-7080362,7080858-7081740 28 6.3
09_02_0012 + 2965797-2966714,2966756-2967011,2967051-2967147,296... 28 6.3
08_01_0722 + 6412654-6412860,6413142-6413687,6413745-6413877,641... 28 6.3
07_01_0251 + 1874148-1874311,1874367-1874429,1874484-1874709,187... 28 6.3
03_05_0127 + 21069312-21069668,21070023-21072830,21072975-21073178 28 6.3
03_02_0579 - 9606317-9606892,9607571-9607799,9607902-9608011,960... 28 6.3
02_05_1177 + 34739359-34740304,34740401-34740568,34740672-34741852 28 6.3
02_04_0516 + 23593088-23593116,23593209-23593336,23593527-235937... 28 6.3
02_02_0520 + 11152718-11153600,11153736-11153917,11154160-111542... 28 6.3
10_04_0007 + 7439378-7439677,7439873-7440308,7440483-7440593,744... 27 8.3
08_01_0053 + 365188-365376,365451-365729,365818-367341 27 8.3
07_01_0070 + 515247-515397,516198-516265,516360-518456,518750-51... 27 8.3
03_01_0423 + 3240224-3240394,3241464-3241628,3242322-3242339,324... 27 8.3
01_03_0281 - 14570635-14574633 27 8.3
>09_06_0042 -
20443686-20443793,20444083-20444172,20444463-20444570,
20445144-20445206,20445685-20445795,20445886-20445955,
20447517-20447539
Length = 190
Score = 46.0 bits (104), Expect = 2e-05
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Frame = -2
Query: 323 MRRRAGVGAIQKHRLEQEKYKEKGTEIQENQFQQMSKQLEVFRENLEDFASKHK---SEI 153
MRRR G+ +Q +++++ G + + + M +QL FR LE+FA KHK E+
Sbjct: 15 MRRRPGIAGLQNAAATRDQFRLVGENVAKVRTDVMKEQLATFRTQLEEFARKHKVITIEL 74
Query: 152 KKNAQFR--RQFQEMCAAIGVDPLAYGERML 66
K ++ F+ F M G + ++ G++ L
Sbjct: 75 KWHSIFQLLSNFVYMVLGSGFEVISVGKKKL 105
>03_05_0176 +
21546952-21547887,21548856-21548921,21549959-21550877,
21551277-21551449,21551927-21552475
Length = 880
Score = 31.5 bits (68), Expect = 0.51
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Frame = -2
Query: 287 HRLEQEKY--KEKGTEIQENQFQQMSKQLEVFR--ENLEDFASK-----HKSEIKKNAQF 135
H++ QEK+ ++K E Q+ QFQ SK+ E R + L + K + + K+NAQ
Sbjct: 762 HQMSQEKHHWQQKHREEQQQQFQNQSKEQEQERRMQKLRELRKKKNKRTQRRKRKQNAQV 821
Query: 134 RRQFQ 120
+Q Q
Sbjct: 822 MKQHQ 826
>02_05_0232 + 27041793-27042087,27042822-27042943,27043098-27043219,
27043601-27043705,27043828-27044257,27044356-27044517,
27044565-27045260,27045349-27046128,27046441-27046654,
27047621-27047981,27047993-27048140,27048276-27048419,
27048784-27048888,27049749-27049794,27050089-27050255,
27050338-27050490,27050654-27050950,27051053-27051220,
27051298-27051363,27051451-27051927,27052031-27052768,
27052935-27053120
Length = 1993
Score = 29.9 bits (64), Expect = 1.6
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 5/70 (7%)
Frame = -2
Query: 332 QPKMRRRAG---VGAIQK-HRLEQEKYKE-KGTEIQENQFQQMSKQLEVFRENLEDFASK 168
+ K RR+A + A++K H LE + E K E E F + ++++ + L S+
Sbjct: 1510 ETKRRRKAESEMLSALKKVHDLEHQYLNELKRREAVEETFARQKEEIQETKRELNKIRSR 1569
Query: 167 HKSEIKKNAQ 138
H +EIK + +
Sbjct: 1570 HMTEIKAHEE 1579
>01_03_0179 + 13500413-13500768,13502522-13502642,13502876-13502998,
13504409-13504497,13504612-13504696,13504852-13505011,
13505096-13505160,13505296-13505349,13505437-13505527,
13505685-13505986,13506084-13506365,13506451-13506764,
13506920-13507080,13507202-13507305,13507379-13507535,
13507652-13507896,13507995-13508327,13508428-13508751,
13508816-13508899,13509001-13509169,13509610-13509731,
13510538-13510792,13511115-13511252
Length = 1377
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/67 (26%), Positives = 33/67 (49%)
Frame = +3
Query: 117 FLKLPSELSILLYFTLVF*CKIFQIFPKHFQLFRHLLELVFLYFCALFFIFLLFQSVFLD 296
F ++ EL +L TLV+ ++ + + + + + L F+YF L+F F +V L
Sbjct: 1245 FGQVAIELPYILVQTLVYGVLVYSMIGFEWTVAKFIWYLFFMYFTLLYFTFFGMMAVGLT 1304
Query: 297 CTYTCAA 317
+ AA
Sbjct: 1305 PNESIAA 1311
>10_02_0066 + 4871759-4871857,4872086-4872511
Length = 174
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -1
Query: 174 IKTQE*NKEECSVQKAISGNVCCHRCGSTGLRGKD 70
+ QE K + +V KA+ ++ C CG+TG G D
Sbjct: 124 LDNQEKGKPQAAV-KALDSHITCEVCGNTGHMGND 157
>01_05_0262 -
20137391-20137861,20137937-20138100,20138140-20138220,
20138437-20138614,20138786-20139164,20139183-20139358
Length = 482
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -1
Query: 132 KAISGNVCCHRCGSTGLRGKDAGLCLMTQVG 40
KA+ +V C CG+TG G D CL T+ G
Sbjct: 189 KALDSHVTCEVCGNTGHSGND---CLETREG 216
>01_05_0662 - 24103475-24103735,24103831-24104085,24104280-24104451,
24104535-24104762,24104864-24104997,24105101-24105184,
24105273-24105563,24105660-24105992,24106081-24106334,
24106435-24106591,24106674-24106777,24106879-24107039,
24107216-24107529,24107614-24107895,24107991-24108292,
24108367-24108457,24108566-24108619,24108785-24108861,
24108963-24109207,24109322-24109410,24110811-24111254
Length = 1443
Score = 28.7 bits (61), Expect = 3.6
Identities = 17/67 (25%), Positives = 33/67 (49%)
Frame = +3
Query: 117 FLKLPSELSILLYFTLVF*CKIFQIFPKHFQLFRHLLELVFLYFCALFFIFLLFQSVFLD 296
F ++ EL ++ TL++ ++ + + + + L L F+YF L+F F +V L
Sbjct: 1270 FGQVAIELPYIMVQTLIYGVLVYSMIGFEWTVAKFLWYLFFMYFTLLYFTFYGMMAVGLT 1329
Query: 297 CTYTCAA 317
+ AA
Sbjct: 1330 PNESIAA 1336
>07_01_1018 - 8664851-8665495,8665525-8665935,8666374-8666580
Length = 420
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -1
Query: 171 KTQE*NKEECSVQKAISGNVCCHRCGSTGLRGKD 70
+ E K + KA+ +V C CG+TG G D
Sbjct: 140 RLDEHEKRPQGIVKALDSHVTCEVCGNTGHSGND 173
>06_03_1475 -
30391555-30391890,30391982-30392233,30392358-30392619,
30393232-30393320,30393408-30393592,30393673-30393781,
30393886-30393942,30394047-30394196
Length = 479
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -3
Query: 271 RNIKKRAQKYKKTNSSRCRNNWKCLGKI 188
+NIKK ++ KKTN C N+ + L ++
Sbjct: 393 QNIKKHEKEKKKTNDDSCINSQQSLSRV 420
>04_03_0050 +
10161245-10161363,10161557-10161686,10161868-10162456,
10162661-10162995
Length = 390
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -1
Query: 147 ECSVQKAISGNVCCHRCGSTGLRGKD 70
+C+V KA+ +V C CG TG G D
Sbjct: 123 QCTV-KALDSHVTCEVCGGTGHSGND 147
>12_02_0547 - 20291895-20292043,20292339-20293164
Length = 324
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -1
Query: 165 QE*NKEECSVQKAISGNVCCHRCGSTGLRGKD 70
QE +K + +V KA+ ++ C CG+TG G D
Sbjct: 205 QEKSKPQDTV-KALDSHITCEVCGNTGHSGND 235
>10_03_0015 - 7079715-7079898,7080107-7080362,7080858-7081740
Length = 440
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -1
Query: 132 KAISGNVCCHRCGSTGLRGKD 70
KA+ +V C CGSTG G D
Sbjct: 252 KALDSHVTCEVCGSTGHSGND 272
>09_02_0012 +
2965797-2966714,2966756-2967011,2967051-2967147,
2967175-2967634,2967804-2968117,2968220-2968235
Length = 686
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -1
Query: 132 KAISGNVCCHRCGSTGLRGKD 70
KA+ +V C CGSTG G D
Sbjct: 252 KALDSHVTCEVCGSTGHSGND 272
>08_01_0722 +
6412654-6412860,6413142-6413687,6413745-6413877,
6413917-6414035,6414128-6414883,6415209-6415258,
6415560-6416679
Length = 976
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -1
Query: 132 KAISGNVCCHRCGSTGLRGKDAGLCLMTQVG 40
KA+ +V C CG+TG G D CL T G
Sbjct: 156 KALDSHVTCEVCGNTGDSGND---CLETYEG 183
>07_01_0251 +
1874148-1874311,1874367-1874429,1874484-1874709,
1874830-1875081,1875158-1875267,1875720-1875815,
1875898-1875985,1876246-1876475,1876745-1876929,
1877136-1877335,1877592-1877924,1878058-1878159,
1878869-1879166,1879626-1879774,1879859-1880143,
1880531-1880728
Length = 992
Score = 27.9 bits (59), Expect = 6.3
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +1
Query: 262 LYFSCSNLCFWIAPTPARRRIFGCIVLKC 348
+Y+ C L FW+ TP +FG + C
Sbjct: 856 IYYVCVFLYFWVLSTPVVSLVFGSYLYIC 884
>03_05_0127 + 21069312-21069668,21070023-21072830,21072975-21073178
Length = 1122
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/48 (29%), Positives = 28/48 (58%)
Frame = -2
Query: 245 IQENQFQQMSKQLEVFRENLEDFASKHKSEIKKNAQFRRQFQEMCAAI 102
++E +FQ+M K +E + +DF S +IK + + R QE+ +++
Sbjct: 871 VEELEFQEMLKWVEWSQVGQDDFPSLRLLKIKDSHELRYLPQELSSSL 918
>03_02_0579 - 9606317-9606892,9607571-9607799,9607902-9608011,
9608898-9609275,9609380-9609658,9610044-9610168,
9610269-9610335,9610582-9612006
Length = 1062
Score = 27.9 bits (59), Expect = 6.3
Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +2
Query: 194 P*TLPVVSTSAGIGFLVFLCPFL--YISLVPICVFGLHLHLRGVAFLVVLY*SVL 352
P L +S S G+ FL+ PFL +VP+ F L + VAF VVL VL
Sbjct: 988 PWLLLAMSVSFGLHFLILYVPFLAQVFGIVPLS-FNEWLLVIAVAFPVVLIDEVL 1041
>02_05_1177 + 34739359-34740304,34740401-34740568,34740672-34741852
Length = 764
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +2
Query: 188 NFP*TLPVVS-TSAGIGFLVFLCPFLYISL 274
NFP L VV+ S G+ VF+C +LY+ L
Sbjct: 362 NFPLALKVVTGVSVGVFLSVFMCFWLYLGL 391
>02_04_0516 +
23593088-23593116,23593209-23593336,23593527-23593714,
23593861-23593919,23594997-23595345,23596081-23596333,
23596404-23597476
Length = 692
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/65 (24%), Positives = 29/65 (44%)
Frame = -3
Query: 298 QSKNTDWNKRNIKKRAQKYKKTNSSRCRNNWKCLGKIWKILHQNTRVK*RRMLSSEGNFR 119
+ K K+N KK+ +K KK + + W K I+ + +K ++ + NFR
Sbjct: 79 KKKKKKKKKKNKKKKKKKKKKKKKKKKKKRWPS-NKAQHIMSDTSHIK--KINTGRNNFR 135
Query: 118 KCVLP 104
+P
Sbjct: 136 NANVP 140
>02_02_0520 +
11152718-11153600,11153736-11153917,11154160-11154249,
11154343-11154627,11154776-11154994,11155112-11155339
Length = 628
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = -2
Query: 278 EQEKYKEKGTEIQENQFQQMSKQLEVFRENLEDFASKHKSEIKKNAQ 138
E+ K + +EN ++ SKQL F + K +SE+KKN++
Sbjct: 312 EETDQLRKQLDDKENAIERRSKQLSKFVAQTDIERRKLESEMKKNSE 358
>10_04_0007 +
7439378-7439677,7439873-7440308,7440483-7440593,
7440633-7440762,7440798-7441512
Length = 563
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -1
Query: 177 CIKTQE*NKEECSVQKAISGNVCCHRCGSTGLRGKD 70
C+ E K+ KA+ +V C CG+TG G D
Sbjct: 174 CLDDHE--KQPQGTVKALDSHVTCEVCGNTGHSGND 207
>08_01_0053 + 365188-365376,365451-365729,365818-367341
Length = 663
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +3
Query: 261 FIFLLFQSVFLDCTYTCAASHF 326
F FL VFLDCT+ + HF
Sbjct: 126 FRFLAADYVFLDCTFAACSLHF 147
>07_01_0070 +
515247-515397,516198-516265,516360-518456,518750-518900,
519883-520638,520990-521164,521303-521387
Length = 1160
Score = 27.5 bits (58), Expect = 8.3
Identities = 15/66 (22%), Positives = 29/66 (43%)
Frame = -2
Query: 335 IQPKMRRRAGVGAIQKHRLEQEKYKEKGTEIQENQFQQMSKQLEVFRENLEDFASKHKSE 156
+ P+ + GA K + Y E +++ FQQ +K L ++ L+ +K +
Sbjct: 409 VLPRKLPKGSKGAHGKEQHAASVYSEIEKRLKDLDFQQSNKDLRALKQILDSMQAKGLLQ 468
Query: 155 IKKNAQ 138
KK +
Sbjct: 469 NKKREE 474
>03_01_0423 +
3240224-3240394,3241464-3241628,3242322-3242339,
3242494-3242836,3244138-3248540,3248928-3249107,
3249108-3250892,3251055-3252173
Length = 2727
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/48 (22%), Positives = 24/48 (50%)
Frame = -2
Query: 260 EKGTEIQENQFQQMSKQLEVFRENLEDFASKHKSEIKKNAQFRRQFQE 117
++ +QE + +Q K++E F +L+D +K K +Q+ +
Sbjct: 525 DQKVRVQEQELEQSRKEIESFHLSLQDEMAKRKQAEDALCSLEKQYAQ 572
>01_03_0281 - 14570635-14574633
Length = 1332
Score = 27.5 bits (58), Expect = 8.3
Identities = 9/42 (21%), Positives = 20/42 (47%)
Frame = +1
Query: 169 FDAKSSKFSLNTSSCFDICWNWFSCISVPFSLYFSCSNLCFW 294
F K+S ++ C+ C +W +++ + C+ L +W
Sbjct: 992 FSHKTSNATMELRGCYFFCMDWECFVNLQDLVINCCNELVYW 1033
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,101,608
Number of Sequences: 37544
Number of extensions: 306270
Number of successful extensions: 1046
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1018
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1045
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1376330256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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