Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_O01
         (328 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U02588-1|AAA18901.1|  110|Anopheles gambiae translation initiati...    22   5.1  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    21   8.9  

>U02588-1|AAA18901.1|  110|Anopheles gambiae translation
          initiation factor protein.
          Length = 110

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -3

Query: 47 DHIKLADYEIHDGM 6
          D IK ADY++ DG+
Sbjct: 14 DAIKGADYDVQDGL 27


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 111 LLTSLNHPRXSSGXAFNSN 167
           LL+ LNH R S   +FN++
Sbjct: 750 LLSPLNHKRSSGIKSFNAD 768


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 259,458
Number of Sequences: 2352
Number of extensions: 3367
Number of successful extensions: 4
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 22477884
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)