Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_pT_O01
(328 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT007355-1|AAP36019.1| 73|Homo sapiens ubiquitin-like 5 protein. 55 4e-08
BC110839-1|AAI10840.1| 73|Homo sapiens ubiquitin-like 5 protein. 55 4e-08
BC007053-1|AAH07053.1| 73|Homo sapiens UBL5 protein protein. 55 4e-08
AF313915-1|AAK14178.1| 73|Homo sapiens ubiquitin-like 5 protei... 55 4e-08
D13636-1|BAA02800.1| 911|Homo sapiens KIAA0011 protein. 28 5.8
BT009799-1|AAP88801.1| 911|Homo sapiens general transcription f... 28 5.8
BC020981-1|AAH20981.1| 911|Homo sapiens general transcription f... 28 5.8
AF054988-1|AAC09349.1| 292|Homo sapiens unknown protein. 28 5.8
AC013413-7|AAY24299.1| 377|Homo sapiens unknown protein. 28 5.8
>BT007355-1|AAP36019.1| 73|Homo sapiens ubiquitin-like 5 protein.
Length = 73
Score = 55.2 bits (127), Expect = 4e-08
Identities = 23/27 (85%), Positives = 27/27 (100%)
Frame = -2
Query: 135 VGDLKKLIAAQTGTRYDKIVLKKWYTV 55
+GDLKKLIAAQTGTR++KIVLKKWYT+
Sbjct: 24 IGDLKKLIAAQTGTRWNKIVLKKWYTI 50
Score = 53.2 bits (122), Expect = 2e-07
Identities = 30/68 (44%), Positives = 36/68 (52%)
Frame = -3
Query: 206 MLEVTCNDRLGKKVRVKCXP*RXPWVI*RS**PHKLALDTTK*YSRNGTQYXKDHIKLAD 27
M+EV CNDRLGKKVRVKC + + + K + KDH+ L D
Sbjct: 1 MIEVVCNDRLGKKVRVKCNTDDTIGDL-KKLIAAQTGTRWNKIVLKKWYTIFKDHVSLGD 59
Query: 26 YEIHDGMN 3
YEIHDGMN
Sbjct: 60 YEIHDGMN 67
>BC110839-1|AAI10840.1| 73|Homo sapiens ubiquitin-like 5 protein.
Length = 73
Score = 55.2 bits (127), Expect = 4e-08
Identities = 23/27 (85%), Positives = 27/27 (100%)
Frame = -2
Query: 135 VGDLKKLIAAQTGTRYDKIVLKKWYTV 55
+GDLKKLIAAQTGTR++KIVLKKWYT+
Sbjct: 24 IGDLKKLIAAQTGTRWNKIVLKKWYTI 50
Score = 53.2 bits (122), Expect = 2e-07
Identities = 30/68 (44%), Positives = 36/68 (52%)
Frame = -3
Query: 206 MLEVTCNDRLGKKVRVKCXP*RXPWVI*RS**PHKLALDTTK*YSRNGTQYXKDHIKLAD 27
M+EV CNDRLGKKVRVKC + + + K + KDH+ L D
Sbjct: 1 MIEVVCNDRLGKKVRVKCNTDDTIGDL-KKLIAAQTGTRWNKIVLKKWYTIFKDHVSLGD 59
Query: 26 YEIHDGMN 3
YEIHDGMN
Sbjct: 60 YEIHDGMN 67
>BC007053-1|AAH07053.1| 73|Homo sapiens UBL5 protein protein.
Length = 73
Score = 55.2 bits (127), Expect = 4e-08
Identities = 23/27 (85%), Positives = 27/27 (100%)
Frame = -2
Query: 135 VGDLKKLIAAQTGTRYDKIVLKKWYTV 55
+GDLKKLIAAQTGTR++KIVLKKWYT+
Sbjct: 24 IGDLKKLIAAQTGTRWNKIVLKKWYTI 50
Score = 53.2 bits (122), Expect = 2e-07
Identities = 30/68 (44%), Positives = 36/68 (52%)
Frame = -3
Query: 206 MLEVTCNDRLGKKVRVKCXP*RXPWVI*RS**PHKLALDTTK*YSRNGTQYXKDHIKLAD 27
M+EV CNDRLGKKVRVKC + + + K + KDH+ L D
Sbjct: 1 MIEVVCNDRLGKKVRVKCNTDDTIGDL-KKLIAAQTGTRWNKIVLKKWYTIFKDHVSLGD 59
Query: 26 YEIHDGMN 3
YEIHDGMN
Sbjct: 60 YEIHDGMN 67
>AF313915-1|AAK14178.1| 73|Homo sapiens ubiquitin-like 5 protein
protein.
Length = 73
Score = 55.2 bits (127), Expect = 4e-08
Identities = 23/27 (85%), Positives = 27/27 (100%)
Frame = -2
Query: 135 VGDLKKLIAAQTGTRYDKIVLKKWYTV 55
+GDLKKLIAAQTGTR++KIVLKKWYT+
Sbjct: 24 IGDLKKLIAAQTGTRWNKIVLKKWYTI 50
Score = 53.2 bits (122), Expect = 2e-07
Identities = 30/68 (44%), Positives = 36/68 (52%)
Frame = -3
Query: 206 MLEVTCNDRLGKKVRVKCXP*RXPWVI*RS**PHKLALDTTK*YSRNGTQYXKDHIKLAD 27
M+EV CNDRLGKKVRVKC + + + K + KDH+ L D
Sbjct: 1 MIEVVCNDRLGKKVRVKCNTDDTIGDL-KKLIAAQTGTRWNKIVLKKWYTIFKDHVSLGD 59
Query: 26 YEIHDGMN 3
YEIHDGMN
Sbjct: 60 YEIHDGMN 67
>D13636-1|BAA02800.1| 911|Homo sapiens KIAA0011 protein.
Length = 911
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +2
Query: 20 FHSLQV*YDPXNTVYHFLSTILSYLVP 100
F L+ Y+P N++ FLST L++L+P
Sbjct: 640 FWDLRRPYEPINSIKRFLSTELAWLLP 666
>BT009799-1|AAP88801.1| 911|Homo sapiens general transcription
factor IIIC, polypeptide 2, beta 110kDa protein.
Length = 911
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +2
Query: 20 FHSLQV*YDPXNTVYHFLSTILSYLVP 100
F L+ Y+P N++ FLST L++L+P
Sbjct: 640 FWDLRRPYEPINSIKRFLSTELAWLLP 666
>BC020981-1|AAH20981.1| 911|Homo sapiens general transcription
factor IIIC, polypeptide 2, beta 110kDa protein.
Length = 911
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +2
Query: 20 FHSLQV*YDPXNTVYHFLSTILSYLVP 100
F L+ Y+P N++ FLST L++L+P
Sbjct: 640 FWDLRRPYEPINSIKRFLSTELAWLLP 666
>AF054988-1|AAC09349.1| 292|Homo sapiens unknown protein.
Length = 292
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +2
Query: 20 FHSLQV*YDPXNTVYHFLSTILSYLVP 100
F L+ Y+P N++ FLST L++L+P
Sbjct: 21 FWDLRRPYEPINSIKRFLSTELAWLLP 47
>AC013413-7|AAY24299.1| 377|Homo sapiens unknown protein.
Length = 377
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +2
Query: 20 FHSLQV*YDPXNTVYHFLSTILSYLVP 100
F L+ Y+P N++ FLST L++L+P
Sbjct: 106 FWDLRRPYEPINSIKRFLSTELAWLLP 132
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,547,759
Number of Sequences: 237096
Number of extensions: 499948
Number of successful extensions: 556
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 548
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 556
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1685725862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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