Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_O01
         (328 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023690-1|AAY85090.1|   73|Drosophila melanogaster IP03783p pro...    55   2e-08
AE013599-231|AAF57398.1|   73|Drosophila melanogaster CG3450-PA ...    55   2e-08

>BT023690-1|AAY85090.1|   73|Drosophila melanogaster IP03783p
           protein.
          Length = 73

 Score = 55.2 bits (127), Expect = 2e-08
 Identities = 31/68 (45%), Positives = 39/68 (57%)
 Frame = -3

Query: 206 MLEVTCNDRLGKKVRVKCXP*RXPWVI*RS**PHKLALDTTK*YSRNGTQYXKDHIKLAD 27
           M+E+TCNDRLGKKVRVKC P      + +     +      K   +      KD I+L+D
Sbjct: 1   MIEITCNDRLGKKVRVKCNPDDTIGDL-KKLIAAQTGTKHEKIVLKKWYTIFKDPIRLSD 59

Query: 26  YEIHDGMN 3
           YEIHDGMN
Sbjct: 60  YEIHDGMN 67



 Score = 54.4 bits (125), Expect = 3e-08
 Identities = 22/27 (81%), Positives = 27/27 (100%)
 Frame = -2

Query: 135 VGDLKKLIAAQTGTRYDKIVLKKWYTV 55
           +GDLKKLIAAQTGT+++KIVLKKWYT+
Sbjct: 24  IGDLKKLIAAQTGTKHEKIVLKKWYTI 50


>AE013599-231|AAF57398.1|   73|Drosophila melanogaster CG3450-PA
           protein.
          Length = 73

 Score = 55.2 bits (127), Expect = 2e-08
 Identities = 31/68 (45%), Positives = 39/68 (57%)
 Frame = -3

Query: 206 MLEVTCNDRLGKKVRVKCXP*RXPWVI*RS**PHKLALDTTK*YSRNGTQYXKDHIKLAD 27
           M+E+TCNDRLGKKVRVKC P      + +     +      K   +      KD I+L+D
Sbjct: 1   MIEITCNDRLGKKVRVKCNPDDTIGDL-KKLIAAQTGTKHEKIVLKKWYTIFKDPIRLSD 59

Query: 26  YEIHDGMN 3
           YEIHDGMN
Sbjct: 60  YEIHDGMN 67



 Score = 54.4 bits (125), Expect = 3e-08
 Identities = 22/27 (81%), Positives = 27/27 (100%)
 Frame = -2

Query: 135 VGDLKKLIAAQTGTRYDKIVLKKWYTV 55
           +GDLKKLIAAQTGT+++KIVLKKWYT+
Sbjct: 24  IGDLKKLIAAQTGTKHEKIVLKKWYTI 50


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,294,558
Number of Sequences: 53049
Number of extensions: 155596
Number of successful extensions: 274
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 274
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 693319869
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)