Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_N24
         (611 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089579-1|AAL90317.1|  911|Drosophila melanogaster RE11181p pro...    31   1.6  
AE014297-3664|AAF56360.2|  911|Drosophila melanogaster CG31121-P...    31   1.6  
AE014297-3663|AAF56359.2|  911|Drosophila melanogaster CG31121-P...    31   1.6  
AY118454-1|AAM49823.1|  489|Drosophila melanogaster AT17310p pro...    29   6.5  
AY075213-1|AAL68080.1|  489|Drosophila melanogaster AT15089p pro...    29   6.5  

>AY089579-1|AAL90317.1|  911|Drosophila melanogaster RE11181p
           protein.
          Length = 911

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 21/70 (30%), Positives = 33/70 (47%)
 Frame = +3

Query: 51  HRNCV*IKLIIRF*IYTINMYKYAIRFATRTL*LRKYTKILYFA*FSFFGILKSLVICIF 230
           + +CV + +     + TI   +   R A R + L  YT+ LY    S  G+  SL I + 
Sbjct: 656 YHHCVMVLVYWPLVMLTIRDTQEDRRHAERDIRLGLYTRSLYIIVQSLLGLFPSLCIWLA 715

Query: 231 SLTPHHLISG 260
            L P H ++G
Sbjct: 716 YLLPAHSMAG 725


>AE014297-3664|AAF56360.2|  911|Drosophila melanogaster CG31121-PB,
           isoform B protein.
          Length = 911

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 21/70 (30%), Positives = 33/70 (47%)
 Frame = +3

Query: 51  HRNCV*IKLIIRF*IYTINMYKYAIRFATRTL*LRKYTKILYFA*FSFFGILKSLVICIF 230
           + +CV + +     + TI   +   R A R + L  YT+ LY    S  G+  SL I + 
Sbjct: 656 YHHCVMVLVYWPLVMLTIRDTQEDRRHAERDIRLGLYTRSLYIIVQSLLGLFPSLCIWLA 715

Query: 231 SLTPHHLISG 260
            L P H ++G
Sbjct: 716 YLLPAHSMAG 725


>AE014297-3663|AAF56359.2|  911|Drosophila melanogaster CG31121-PA,
           isoform A protein.
          Length = 911

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 21/70 (30%), Positives = 33/70 (47%)
 Frame = +3

Query: 51  HRNCV*IKLIIRF*IYTINMYKYAIRFATRTL*LRKYTKILYFA*FSFFGILKSLVICIF 230
           + +CV + +     + TI   +   R A R + L  YT+ LY    S  G+  SL I + 
Sbjct: 656 YHHCVMVLVYWPLVMLTIRDTQEDRRHAERDIRLGLYTRSLYIIVQSLLGLFPSLCIWLA 715

Query: 231 SLTPHHLISG 260
            L P H ++G
Sbjct: 716 YLLPAHSMAG 725


>AY118454-1|AAM49823.1|  489|Drosophila melanogaster AT17310p
           protein.
          Length = 489

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = +3

Query: 411 FFPIYNNQCT*SAKKRWQPHIQS 479
           F P+YNNQ   S +++ QPH QS
Sbjct: 237 FLPLYNNQQQQSQQQQQQPHQQS 259


>AY075213-1|AAL68080.1|  489|Drosophila melanogaster AT15089p
           protein.
          Length = 489

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = +3

Query: 411 FFPIYNNQCT*SAKKRWQPHIQS 479
           F P+YNNQ   S +++ QPH QS
Sbjct: 237 FLPLYNNQQQQSQQQQQQPHQQS 259


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,505,693
Number of Sequences: 53049
Number of extensions: 396878
Number of successful extensions: 615
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 615
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2497240350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)