Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_pT_N23
(695 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC428.08c |clr4||histone H3 methyltransferase Clr4|Schizosacch... 87 2e-18
SPCC306.04c |set1||histone lysine methyltransferase Set1|Schizos... 55 8e-09
SPAC29B12.02c |set2||histone lysine methyltransferase Set2 |Schi... 54 2e-08
SPBC216.04c |||methionine sulfoxide |Schizosaccharomyces pombe|c... 32 0.090
SPCC4B3.12 |set9||histone lysine methyltransferase Set9|Schizosa... 29 0.64
SPCC1739.05 |set5||histone lysine methyltransferase Set5 |Schizo... 28 1.1
SPAC4G9.14 |||Mvp17/PMP22 family|Schizosaccharomyces pombe|chr 1... 26 4.5
SPBC839.02 |||arrestin Aly1 related|Schizosaccharomyces pombe|ch... 26 5.9
SPBP8B7.07c |set6||histone lysine methyltransferase Set6 |Schizo... 26 5.9
SPCP1E11.03 |mug170||arrestin|Schizosaccharomyces pombe|chr 3|||... 26 5.9
SPAC823.09c |||L-asparaginase |Schizosaccharomyces pombe|chr 1||... 26 5.9
>SPBC428.08c |clr4||histone H3 methyltransferase
Clr4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 490
Score = 87.0 bits (206), Expect = 2e-18
Identities = 63/191 (32%), Positives = 93/191 (48%), Gaps = 12/191 (6%)
Frame = -3
Query: 570 LILECNKQCTCSYQCGNRLVQLGPLKGLMIKKCDIVQKGFGLFTNVFVRNGSFICEYIGE 391
+I ECN C+CS +C NR+VQ G L I K +KG+G+ + F G+FI Y+GE
Sbjct: 303 VIYECNSFCSCSMECPNRVVQRGRTLPLEIFKTK--EKGWGVRSLRFAPAGTFITCYLGE 360
Query: 390 LLTKDQAFKRYHHNKTNKEMNYIFCLIEHCGTEVIETFYDPSKFGNIGRYINHSCEPNSQ 211
++T +A KR N + + Y+F L + E D +G++ R+ NHSC PN
Sbjct: 361 VITSAEAAKR-DKNYDDDGITYLFDL--DMFDDASEYTVDAQNYGDVSRFFNHSCSPNIA 417
Query: 210 IL-PVRYD--MPIPKLAIFACEDIKPGSEITXXXXXXXXXXXSELID---------RKQC 67
I VR I LA FA +DI+P E+T + R+QC
Sbjct: 418 IYSAVRNHGFRTIYDLAFFAIKDIQPLEELTFDYAGAKDFSPVQSQKSQQNRISKLRRQC 477
Query: 66 FCKTLSCKGXM 34
C + +C+G +
Sbjct: 478 KCGSANCRGWL 488
>SPCC306.04c |set1||histone lysine methyltransferase
Set1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 920
Score = 55.2 bits (127), Expect = 8e-09
Identities = 41/140 (29%), Positives = 64/140 (45%), Gaps = 1/140 (0%)
Frame = -3
Query: 450 GLFTNVFVRNGSFICEYIGELLTKDQAFKRY-HHNKTNKEMNYIFCLIEHCGTEVIETFY 274
GLF + + EYIGE++ + A R ++ + +Y+F + E +
Sbjct: 794 GLFAMENIDKNDMVIEYIGEIIRQRVADNREKNYVREGIGDSYLFRIDE-------DVIV 846
Query: 273 DPSKFGNIGRYINHSCEPNSQILPVRYDMPIPKLAIFACEDIKPGSEITXXXXXXXXXXX 94
D +K GNI R+INHSC PN +R + K+ I+A DI G E+T
Sbjct: 847 DATKKGNIARFINHSCAPNCIARIIRVEGK-RKIVIYADRDIMHGEELT------YDYKF 899
Query: 93 SELIDRKQCFCKTLSCKGXM 34
E D+ C C +C+G +
Sbjct: 900 PEEADKIPCLCGAPTCRGYL 919
>SPAC29B12.02c |set2||histone lysine methyltransferase Set2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 798
Score = 54.0 bits (124), Expect = 2e-08
Identities = 37/147 (25%), Positives = 69/147 (46%), Gaps = 1/147 (0%)
Frame = -3
Query: 564 LEC-NKQCTCSYQCGNRLVQLGPLKGLMIKKCDIVQKGFGLFTNVFVRNGSFICEYIGEL 388
+EC ++ C C N+ Q + + + +KGFGL + + +F+ EYIGE+
Sbjct: 156 IECTDEDNVCGPSCQNQRFQRHEFAKVDVFLTE--KKGFGLRADANLPKDTFVYEYIGEV 213
Query: 387 LTKDQAFKRYHHNKTNKEMNYIFCLIEHCGTEVIETFYDPSKFGNIGRYINHSCEPNSQI 208
+ + + KR + ++ F +++ + D +K G++ R+ NHSC PN +
Sbjct: 214 IPEQKFRKRMRQYDSEGIKHFYFMMLQK------GEYIDATKRGSLARFCNHSCRPNCYV 267
Query: 207 LPVRYDMPIPKLAIFACEDIKPGSEIT 127
+ ++ IF DI G E+T
Sbjct: 268 DKWMVGDKL-RMGIFCKRDIIRGEELT 293
>SPBC216.04c |||methionine sulfoxide |Schizosaccharomyces pombe|chr
2|||Manual
Length = 138
Score = 31.9 bits (69), Expect = 0.090
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = -3
Query: 510 QLGPLKGLMIKKCDIVQKGFGLFTNVFVRNGSFICEYIGELLTK 379
+LGP K ++++ G G FT+ F + G F+C ELL K
Sbjct: 15 ELGPEKYRIMRQKGTEHPGAGRFTHQFPKQGVFVCAACKELLYK 58
>SPCC4B3.12 |set9||histone lysine methyltransferase
Set9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 441
Score = 29.1 bits (62), Expect = 0.64
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -3
Query: 246 RYINHSCEPNSQILPVRYDMPIPKLAIFACEDIKPGSEIT 127
R++NH C N R++ ++ + DIKPG EIT
Sbjct: 183 RFVNHDCNANC-----RFNTSGKRIWLRCVRDIKPGEEIT 217
>SPCC1739.05 |set5||histone lysine methyltransferase Set5
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 319
Score = 28.3 bits (60), Expect = 1.1
Identities = 35/139 (25%), Positives = 56/139 (40%), Gaps = 13/139 (9%)
Frame = -3
Query: 507 LGPLKGLMIKKCDIVQKGFGLFTNVFVRNGSFICEYIGELLTKDQA--FKRYHHNKTNKE 334
+ P + + K I KG G+ V + G+ I + TK A + KT +E
Sbjct: 1 MNPYETEIYKVVPIPNKGMGMIAKVKIPVGTRIFAETPLIRTKSDAKEIEEALSTKTKEE 60
Query: 333 MNYIFCLIE-HCGT--EVIETFY------DPSKFGN--IGRYINHSCEPNSQILPVRYDM 187
L H T + FY D +K G +G +NH C PN + ++
Sbjct: 61 QEAFHRLFNAHPDTMGPFLGPFYSNALTIDETKGGMFLLGSRMNHDCSPN---VKHTWNP 117
Query: 186 PIPKLAIFACEDIKPGSEI 130
+ ++ + A DI+ G EI
Sbjct: 118 RLDQVTVHAVRDIEAGEEI 136
>SPAC4G9.14 |||Mvp17/PMP22 family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 221
Score = 26.2 bits (55), Expect = 4.5
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +1
Query: 595 LQFRQFTVFNNVIVPARPFQAFTFRI 672
+QFR F +NVI PF A R+
Sbjct: 105 IQFRWFVALSNVIQTENPFIAIVLRV 130
>SPBC839.02 |||arrestin Aly1 related|Schizosaccharomyces pombe|chr
2|||Manual
Length = 530
Score = 25.8 bits (54), Expect = 5.9
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1
Query: 1 INIFILNFIIRHLSFTTKGF 60
INIFI+ II+H+ TK F
Sbjct: 507 INIFIIFLIIKHMCLITKMF 526
>SPBP8B7.07c |set6||histone lysine methyltransferase Set6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 483
Score = 25.8 bits (54), Expect = 5.9
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = -3
Query: 240 INHSCEPNSQIL 205
+NHSC+PN QI+
Sbjct: 192 LNHSCDPNCQII 203
>SPCP1E11.03 |mug170||arrestin|Schizosaccharomyces pombe|chr
3|||Manual
Length = 426
Score = 25.8 bits (54), Expect = 5.9
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +2
Query: 380 LVSNSPIYSQINDPLRTKTLVNKPNPF 460
L SNS S ++DPL +KTL + NPF
Sbjct: 5 LFSNSETCS-LSDPLTSKTLSSIENPF 30
>SPAC823.09c |||L-asparaginase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 285
Score = 25.8 bits (54), Expect = 5.9
Identities = 12/46 (26%), Positives = 18/46 (39%)
Frame = -3
Query: 690 CXNVCSYPKCECLKRSGGNNYVVEHGELPKLKIDSKXKXNLILECN 553
C N C +P CL + +HG +P + L+L N
Sbjct: 94 CCNCCRHPSEACLYILNKRKVMSQHGLVPPAMLVGNGIEKLLLHSN 139
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,630,566
Number of Sequences: 5004
Number of extensions: 52609
Number of successful extensions: 131
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 126
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 321151040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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