Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_pT_N22
(618 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 126 2e-30
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 126 2e-30
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 105 7e-24
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 94 2e-20
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 42 5e-05
SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C |Schizosaccharom... 29 0.41
SPBC3H7.09 |mug142||palmitoyltransferase|Schizosaccharomyces pom... 25 8.8
SPAC3C7.09 |set8||lysine methyltransferase Set8 |Schizosaccharom... 25 8.8
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 126 bits (305), Expect = 2e-30
Identities = 59/123 (47%), Positives = 78/123 (63%)
Frame = -3
Query: 610 AQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFG 431
A P + EPV+L EIQ E A+GGIY VLN++RGHVF E Q GTP++ +KAYLPVNESFG
Sbjct: 720 ASPIIQEPVFLVEIQVSENAMGGIYSVLNKKRGHVFSEEQRVGTPLYNIKAYLPVNESFG 779
Query: 430 FTADLRSNTGGQAFPQCVFDHWQVLPWRPVRTSEQALQRCTGNEKEERIEGRSPRLNSIF 251
FT +LR T GQAFPQ VFDHW + P+ + + Q K + ++ P +
Sbjct: 780 FTGELRQATAGQAFPQLVFDHWSPMSGDPLDPTSKPGQIVCEARKRKGLKENVPDYTEYY 839
Query: 250 GQI 242
++
Sbjct: 840 DRL 842
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 126 bits (305), Expect = 2e-30
Identities = 59/123 (47%), Positives = 78/123 (63%)
Frame = -3
Query: 610 AQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFG 431
A P + EPV+L EIQ E A+GGIY VLN++RGHVF E Q GTP++ +KAYLPVNESFG
Sbjct: 720 ASPIIQEPVFLVEIQVSENAMGGIYSVLNKKRGHVFSEEQRVGTPLYNIKAYLPVNESFG 779
Query: 430 FTADLRSNTGGQAFPQCVFDHWQVLPWRPVRTSEQALQRCTGNEKEERIEGRSPRLNSIF 251
FT +LR T GQAFPQ VFDHW + P+ + + Q K + ++ P +
Sbjct: 780 FTGELRQATAGQAFPQLVFDHWSPMSGDPLDPTSKPGQIVCEARKRKGLKENVPDYTEYY 839
Query: 250 GQI 242
++
Sbjct: 840 DRL 842
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 105 bits (251), Expect = 7e-24
Identities = 48/94 (51%), Positives = 65/94 (69%)
Frame = -3
Query: 613 TAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESF 434
TA PRLMEPVY+ E+ P ++ IY +L RRRGHV ++ G+P+++V+A +PV +S
Sbjct: 835 TASPRLMEPVYMVEVHAPADSLPIIYDLLTRRRGHVLQDIPRPGSPLYLVRALIPVIDSC 894
Query: 433 GFTADLRSNTGGQAFPQCVFDHWQVLPWRPVRTS 332
GF DLR +T GQA Q VFDHWQV+P P+ S
Sbjct: 895 GFETDLRVHTQGQAMCQMVFDHWQVVPGDPLDKS 928
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 1000
Score = 93.9 bits (223), Expect = 2e-20
Identities = 43/98 (43%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
Frame = -3
Query: 604 PRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFT 425
PRLM +Y C++Q +G +YGV+++RRG V +E GTP FIVKA +PV ESFGF
Sbjct: 860 PRLMLAMYSCDVQATSEVLGRVYGVVSKRRGRVIDEEMKEGTPFFIVKALIPVVESFGFA 919
Query: 424 ADLRSNTGGQAFPQCVFDHWQVLPWRP--VRTSEQALQ 317
++ T G A+PQ +F +++L P V T+E+ L+
Sbjct: 920 VEILKRTSGAAYPQLIFHGFEMLDENPFWVPTTEEELE 957
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 42.3 bits (95), Expect = 5e-05
Identities = 20/72 (27%), Positives = 39/72 (54%)
Frame = -3
Query: 610 AQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFG 431
A P ++EP+ I P GG+ G L++R+ + + F ++A +P+N F
Sbjct: 670 ANPMVLEPIMNVSITAPVEHQGGVIGNLDKRKATIVDSD--TDEDEFTLQAEVPLNSMFS 727
Query: 430 FTADLRSNTGGQ 395
+++D+R+ T G+
Sbjct: 728 YSSDIRALTKGK 739
>SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1016
Score = 29.5 bits (63), Expect = 0.41
Identities = 14/47 (29%), Positives = 19/47 (40%)
Frame = +3
Query: 303 FPVQRCRACSEVRTGLQGRTCQWSNTHCGKACPPVLERKSAVKPNDS 443
+ + RC C E G C + C K C P + K K +DS
Sbjct: 414 YQIMRCALCGEFLKNAAGMQCIDCHYTCHKKCYPKVVTKCISKSSDS 460
>SPBC3H7.09 |mug142||palmitoyltransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 350
Score = 25.0 bits (52), Expect = 8.8
Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Frame = +2
Query: 125 SHLRVCFNMMRNM---CC*K*TCVKRFPYRYVFLICFNYVV 238
SH +C N + + C TC+ R YRY F+ + V+
Sbjct: 196 SHCHLCDNCVEYLDHHCIWLNTCIGRRNYRYYFIFLLSVVL 236
>SPAC3C7.09 |set8||lysine methyltransferase Set8
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 429
Score = 25.0 bits (52), Expect = 8.8
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -1
Query: 429 LLPICVPTPADRPSRSAYSTIGRS 358
+LP+ + TPA P + YS G S
Sbjct: 109 VLPLSINTPAQWPEKEVYSLQGTS 132
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,571,158
Number of Sequences: 5004
Number of extensions: 54301
Number of successful extensions: 118
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 115
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 271646730
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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