Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_pT_N22
(618 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0103 + 1082077-1082167,1083037-1085477 147 5e-36
02_04_0017 + 18937774-18937864,18938505-18940945 145 3e-35
01_06_0662 + 30987187-30987277,30987825-30990214 135 2e-32
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 119 2e-27
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 111 3e-25
03_05_0511 + 25056018-25059107 87 8e-18
02_04_0148 - 20198407-20201424 80 2e-15
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 52 4e-07
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 46 3e-05
02_02_0474 + 10738476-10738797,10739568-10739677,10739891-107400... 37 0.015
05_02_0085 - 6465126-6466049 29 3.9
12_02_0873 - 23892193-23892290,23892931-23893111 28 5.2
07_01_0886 - 7356591-7356662,7357002-7357079,7357373-7357444,735... 28 5.2
04_04_1608 - 34753321-34753332,34753434-34753628,34753868-347539... 28 6.8
11_02_0010 + 7322826-7323658,7324236-7324714,7325204-7326195 27 9.0
09_06_0142 - 21107878-21109104 27 9.0
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 147 bits (357), Expect = 5e-36
Identities = 66/99 (66%), Positives = 80/99 (80%)
Frame = -3
Query: 613 TAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESF 434
TA+PRL+EPVYL EIQ PE A+GGIYGVLN++RGHVFEE Q GTP++ +KAYLPV ESF
Sbjct: 720 TAKPRLLEPVYLVEIQAPENALGGIYGVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESF 779
Query: 433 GFTADLRSNTGGQAFPQCVFDHWQVLPWRPVRTSEQALQ 317
GF++ LR+ T GQAFPQCVFDHW ++ P+ S QA Q
Sbjct: 780 GFSSQLRAATSGQAFPQCVFDHWDMMTSDPLEVSSQANQ 818
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -1
Query: 348 DPCEPQSKPYNVVQETRKRKGLKE 277
DP E S+ +V + RKRKGLKE
Sbjct: 808 DPLEVSSQANQLVLDIRKRKGLKE 831
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 145 bits (351), Expect = 3e-35
Identities = 64/97 (65%), Positives = 78/97 (80%)
Frame = -3
Query: 613 TAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESF 434
TA+PRL+EPVYL EIQ PE A+GGIYGVLN++RGHVFEE Q GTP++ +KAYLPV ESF
Sbjct: 720 TAKPRLLEPVYLVEIQAPENALGGIYGVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESF 779
Query: 433 GFTADLRSNTGGQAFPQCVFDHWQVLPWRPVRTSEQA 323
GF++ LR+ T GQAFPQCVFDHW ++ P+ QA
Sbjct: 780 GFSSQLRAATSGQAFPQCVFDHWDMMTSDPLEAGSQA 816
Score = 31.1 bits (67), Expect = 0.73
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = -1
Query: 348 DPCEPQSKPYNVVQETRKRKGLKE 277
DP E S+ +VQ+ RKRKGLKE
Sbjct: 808 DPLEAGSQASTLVQDIRKRKGLKE 831
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 135 bits (327), Expect = 2e-32
Identities = 62/98 (63%), Positives = 76/98 (77%)
Frame = -3
Query: 613 TAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESF 434
TA+PRL+EPVYL EIQ PE A+GGIY VLN++RGHVFEE Q GTP++ +KAYLPV ESF
Sbjct: 718 TAKPRLLEPVYLVEIQAPENALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESF 777
Query: 433 GFTADLRSNTGGQAFPQCVFDHWQVLPWRPVRTSEQAL 320
GFT+ LR+ T GQAFP VFDHW++L P+ + L
Sbjct: 778 GFTSTLRAATSGQAFPLFVFDHWEMLSVDPLEPGTRQL 815
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 119 bits (287), Expect = 2e-27
Identities = 54/111 (48%), Positives = 73/111 (65%)
Frame = -3
Query: 613 TAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESF 434
TA PRLMEP+Y +IQ P+ AVG +YGVLN R G + EES+ GTP+ ++ YLPV +SF
Sbjct: 730 TASPRLMEPMYQVDIQVPKTAVGNVYGVLNSRNGELVEESERTGTPLSNLRFYLPVAKSF 789
Query: 433 GFTADLRSNTGGQAFPQCVFDHWQVLPWRPVRTSEQALQRCTGNEKEERIE 281
FT LR+ T GQAFPQC+F HWQ + P + +A + T K + ++
Sbjct: 790 DFTEKLRAETSGQAFPQCIFHHWQTMRSDPFQEGSEAAKVITDIRKRKGLK 840
>06_03_0715 - 23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 111 bits (268), Expect = 3e-25
Identities = 53/90 (58%), Positives = 63/90 (70%)
Frame = -3
Query: 610 AQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFG 431
A PRLMEPVY EIQ P V IY VL+RRRGHV + GTP+++VKA+LPV ESFG
Sbjct: 847 ANPRLMEPVYYIEIQTPIDCVSAIYTVLSRRRGHVTADVPKPGTPIYVVKAFLPVIESFG 906
Query: 430 FTADLRSNTGGQAFPQCVFDHWQVLPWRPV 341
F DLR +T GQAF VFDHW ++P P+
Sbjct: 907 FETDLRYHTQGQAFCLSVFDHWAIVPGDPL 936
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 87.4 bits (207), Expect = 8e-18
Identities = 40/88 (45%), Positives = 53/88 (60%)
Frame = -3
Query: 607 QPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGF 428
+PRL+E +Y CE+ P +G Y VL+R+R V +E GT +F V AYLPV ES GF
Sbjct: 885 KPRLVEAMYFCELTTPTEQLGATYAVLSRKRARVLKEEMQEGTSLFTVHAYLPVAESVGF 944
Query: 427 TADLRSNTGGQAFPQCVFDHWQVLPWRP 344
+ +LRS T G A V HW+ +P P
Sbjct: 945 SNELRSVTAGAASALLVLSHWEAIPEDP 972
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 79.8 bits (188), Expect = 2e-15
Identities = 37/89 (41%), Positives = 50/89 (56%)
Frame = -3
Query: 610 AQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFG 431
++PRL+EP+Y CE+ P +G +Y VL R V +E GT +F V AYL V ES
Sbjct: 860 SKPRLVEPMYFCELTTPTEQLGSMYAVLGNCRARVLKEEMQEGTSLFTVHAYLSVAESSE 919
Query: 430 FTADLRSNTGGQAFPQCVFDHWQVLPWRP 344
F+ LR+ T G A F HW+ +P P
Sbjct: 920 FSKKLRNATAGAASALLAFSHWETVPQDP 948
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 52.0 bits (119), Expect = 4e-07
Identities = 30/86 (34%), Positives = 45/86 (52%)
Frame = -3
Query: 610 AQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFG 431
A PRL+EP+ E+ PE +G + G LN RRG V G + +V A++P+ E F
Sbjct: 647 AGPRLLEPIMKVEVITPEEHLGDVIGDLNSRRGQVNSFGDKPG-GLKVVDAFVPLAEMFQ 705
Query: 430 FTADLRSNTGGQAFPQCVFDHWQVLP 353
+ + LR T G+A + V+P
Sbjct: 706 YVSTLRGMTKGRASYTMQLAKFDVVP 731
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 45.6 bits (103), Expect = 3e-05
Identities = 23/72 (31%), Positives = 40/72 (55%)
Frame = -3
Query: 610 AQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFG 431
A+P ++EPV E++ P G + G +N+R+G + Q +V ++P+N FG
Sbjct: 669 ARPVILEPVMKVELKVPTEFQGTVTGDMNKRKGIIVGNDQEGDDT--VVVCHVPLNNMFG 726
Query: 430 FTADLRSNTGGQ 395
++ LRS T G+
Sbjct: 727 YSTALRSMTQGK 738
>02_02_0474 +
10738476-10738797,10739568-10739677,10739891-10740094,
10740400-10740576,10740659-10740811,10741535-10741624,
10741939-10742049,10742169-10742285,10742881-10743032,
10743116-10743200,10743597-10743691,10744211-10744376,
10744459-10744654,10745662-10745795
Length = 703
Score = 36.7 bits (81), Expect = 0.015
Identities = 20/88 (22%), Positives = 38/88 (43%)
Frame = -3
Query: 613 TAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESF 434
T +L EP + ++ PE +G + +L +RRG + + ++K +P
Sbjct: 497 TVDGKLQEPYEIAAVEVPEEYMGSVVELLGKRRGQMVDMQPSGPEGTTLLKYKIPTRGLI 556
Query: 433 GFTADLRSNTGGQAFPQCVFDHWQVLPW 350
G + + + G A +FD + PW
Sbjct: 557 GLRNAVLTASRGTAILNTIFDSYG--PW 582
>05_02_0085 - 6465126-6466049
Length = 307
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = -1
Query: 393 PSRSAYSTIGRSSPGDPCEPQSKPYNVVQETRKRKGLKEGLP 268
P++ S + R++ G P +P P R+R+ L+ G P
Sbjct: 6 PTKQPLSPLPRAASGSPTKPTPSPSPSPASARRRRVLRRGSP 47
>12_02_0873 - 23892193-23892290,23892931-23893111
Length = 92
Score = 28.3 bits (60), Expect = 5.2
Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Frame = -1
Query: 444 MSRSVLLPICVPTPADRPSRSAYSTIGRSSPGDPCEPQSK--PYNVVQETRKRKG 286
M R + LP+C P + R S + + DP P S+ P V R++ G
Sbjct: 1 MRRWIRLPLCAPCTWIQLQRRGSSAVAGGASADPAPPSSRMDPARVKTMGRRQDG 55
>07_01_0886 -
7356591-7356662,7357002-7357079,7357373-7357444,
7357511-7357600,7357669-7357783,7358509-7358639,
7358717-7358992,7360147-7360283,7360368-7360502,
7360958-7361325,7362111-7362229,7362295-7362339
Length = 545
Score = 28.3 bits (60), Expect = 5.2
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = -1
Query: 414 VPTPADRPSRSAYSTIGRSSPGDPCEPQSKPYNVVQETRKRK 289
VP P PS S T S GD E +S+ + RKRK
Sbjct: 60 VPLPLPDPSSSRSETSAVRSEGDAAEEKSEEQRPGRRRRKRK 101
>04_04_1608 -
34753321-34753332,34753434-34753628,34753868-34753972,
34754176-34754219,34754645-34754700,34755986-34756146
Length = 190
Score = 27.9 bits (59), Expect = 6.8
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +3
Query: 75 IVWFIIYLVECDIFSCCLTCASAL 146
+ WFI + +F C LTC+ A+
Sbjct: 52 VPWFIYTFIGLGVFMCLLTCSGAI 75
>11_02_0010 + 7322826-7323658,7324236-7324714,7325204-7326195
Length = 767
Score = 27.5 bits (58), Expect = 9.0
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = -3
Query: 271 PRLNSIFGQIVNYIVKAN*KNVSIRKALHACLFSTTHVPHHIKA 140
PR + +++NYIV + K+ + S +PHH+K+
Sbjct: 389 PRTREEWERVLNYIVSTSEKDNDLEVMNKILFMSYNDLPHHMKS 432
>09_06_0142 - 21107878-21109104
Length = 408
Score = 27.5 bits (58), Expect = 9.0
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +2
Query: 347 SPGEDLPMVEYALREGLS-AGVGTQIGSKTER 439
+P E LP++ A REG++ AGV +GS R
Sbjct: 180 NPDEVLPLLRAAQREGVAVAGVSFHVGSGASR 211
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,767,953
Number of Sequences: 37544
Number of extensions: 362871
Number of successful extensions: 1037
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1002
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1036
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1490248872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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