Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_N22
         (618 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-10|CAJ14151.1|  548|Anopheles gambiae putative alkaline...    27   0.64 
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    27   0.64 
DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific do...    25   2.6  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    25   2.6  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    25   2.6  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    23   6.0  

>CR954256-10|CAJ14151.1|  548|Anopheles gambiae putative alkaline
           phosphatase protein.
          Length = 548

 Score = 26.6 bits (56), Expect = 0.64
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -3

Query: 178 LFSTTHVPHHIKADAQVRQQLNMSHST 98
           LFS+ H+P+H+ AD Q    L+   ST
Sbjct: 333 LFSSKHLPYHLDADEQQIPTLSEMVST 359


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 26.6 bits (56), Expect = 0.64
 Identities = 16/51 (31%), Positives = 23/51 (45%)
 Frame = -1

Query: 435  SVLLPICVPTPADRPSRSAYSTIGRSSPGDPCEPQSKPYNVVQETRKRKGL 283
            S L    VP P DR  RS  +     SP  PC  Q+ P+     +++ + L
Sbjct: 1288 SPLAGAAVPKPMDRSLRSILAEQSELSPIKPC--QTNPFRTSTPSKEDEAL 1336


>DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 265

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
 Frame = +3

Query: 315 RCRACSEVRTGLQG--RTCQWSNTHCGKAC 398
           RCR    ++ GL+G  R C++   HC K C
Sbjct: 43  RCRNHG-LKIGLKGHKRYCKYRTCHCEKCC 71


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
 Frame = +3

Query: 315 RCRACSEVRTGLQG--RTCQWSNTHCGKAC 398
           RCR    ++ GL+G  R C++   HC K C
Sbjct: 43  RCRNHG-LKIGLKGHKRYCKYRTCHCEKCC 71


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -2

Query: 488 GRYTYVHCEGLPTC 447
           GRYT  +CE  PTC
Sbjct: 664 GRYTGRYCEKCPTC 677


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -1

Query: 399 DRPSRSAYSTIGRSSPGDPCEPQSKPYNVVQETRKR 292
           DRP+ S  +  G     D C      ++VV++T +R
Sbjct: 703 DRPAGSELTPPGPPDEKDVCGENEDNFDVVRDTDRR 738


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 662,747
Number of Sequences: 2352
Number of extensions: 15104
Number of successful extensions: 23
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60553008
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)