Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_pT_N20
(717 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC191.09c |gst1||glutathione S-transferase Gst1|Schizosaccharo... 42 1e-04
SPCC965.07c |gst2||glutathione S-transferase Gst2|Schizosaccharo... 41 2e-04
SPAC688.04c |gst3||glutathione S-transferase |Schizosaccharomyce... 39 8e-04
SPAC31G5.06 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 32 0.071
SPCC1620.07c |||lunapark homolog|Schizosaccharomyces pombe|chr 3... 32 0.094
SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase Abc4|... 28 1.5
SPAC20G4.08 ||SPAC4F10.01|sequence orphan|Schizosaccharomyces po... 27 3.5
SPBC56F2.12 |ilv5||acetohydroxyacid reductoisomerase|Schizosacch... 26 6.2
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 25 8.2
SPBP35G2.13c |swc2||chromatin remodeling complex subunit Swc2 |S... 25 8.2
SPAC688.08 |srb8|med12|mediator complex subunit Srb8 |Schizosacc... 25 8.2
SPBC1778.04 |spo6||Spo4-Spo6 kinase complex regulatory subunit S... 25 8.2
>SPCC191.09c |gst1||glutathione S-transferase
Gst1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 229
Score = 41.5 bits (93), Expect = 1e-04
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 5/110 (4%)
Frame = -1
Query: 717 WESRAIITYLVNKYXKGSSL-YPEDPKARVLVDQRLYFDI---GTLYQRFSDY-FYPQVF 553
WES AI+ YL +KY + P D V Q L+F G ++ + + Y Q
Sbjct: 69 WESDAILIYLADKYDTERKISLPRDHPEYYKVIQYLFFQASGQGIIWGQAGWFSVYHQEL 128
Query: 552 AGAPADKAKNEKVQEALQLLDKFLEGQKYVAGPNLTVADLSLIASVSSLE 403
+ + +NE ++ L +L+ L+ + Y+ T+ADLS I+ + LE
Sbjct: 129 VISAITRYRNE-IKRVLGVLEDILKDRDYLVANRFTIADLSFISWNNFLE 177
>SPCC965.07c |gst2||glutathione S-transferase
Gst2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 230
Score = 41.1 bits (92), Expect = 2e-04
Identities = 32/105 (30%), Positives = 57/105 (54%), Gaps = 7/105 (6%)
Frame = -1
Query: 717 WESRAIITYLVNKYX--KGSSLYPEDPKARVLVDQRLYFDI---GTLYQR--FSDYFYPQ 559
WES AI+ YL +KY + SL +DP+ L+ Q L+F G ++ + + ++F+ +
Sbjct: 69 WESDAILIYLADKYDTDRKISLSFDDPEYYKLI-QYLFFQASGQGVIWGQAGWFNFFHHE 127
Query: 558 VFAGAPADKAKNEKVQEALQLLDKFLEGQKYVAGPNLTVADLSLI 424
A + +NE ++ L +L+ L+ + Y+ T+ADLS I
Sbjct: 128 PVVSA-VTRYRNE-IKRVLGVLEDILKDRDYLVANKYTIADLSFI 170
>SPAC688.04c |gst3||glutathione S-transferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 242
Score = 38.7 bits (86), Expect = 8e-04
Identities = 21/66 (31%), Positives = 30/66 (45%)
Frame = -1
Query: 504 LQLLDKFLEGQKYVAGPNLTVADLSLIASVSSLEASDIDFKKYANVKRWYETVKSTAPGY 325
L +D L +Y AG T AD + + + + + K Y N+KRW V S P
Sbjct: 148 LDYIDNHLASNEYFAGEQFTAADPQMCFPIFAAQRDYLSQKPYKNIKRWMRVV-SDRPAC 206
Query: 324 QEANEK 307
+ A EK
Sbjct: 207 RIAAEK 212
>SPAC31G5.06 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 32.3 bits (70), Expect = 0.071
Identities = 16/48 (33%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Frame = -2
Query: 308 KDWRHSRDLSIACLKSE-HLSTRNENLFKITSLELNLTN*AELKRHCL 168
K+ H++ +S+ CL S+ +L ++ +FK ++ELN N ++KR+ L
Sbjct: 58 KNHLHNKHVSLYCLLSDRYLQPPSKRIFKRWNMELNNLNCPDIKRYIL 105
>SPCC1620.07c |||lunapark homolog|Schizosaccharomyces pombe|chr
3|||Manual
Length = 334
Score = 31.9 bits (69), Expect = 0.094
Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 4/83 (4%)
Frame = -1
Query: 531 AKNEKVQEALQLLDKFLEGQ----KYVAGPNLTVADLSLIASVSSLEASDIDFKKYANVK 364
A+ K+ +AL+ ++ E Q KY P L LS A+ S+ S + +
Sbjct: 116 AEKRKILDALKSRKEYFETQALLEKYGEQPTLAQKKLSNAAAAKSVPGSSSSSSDPMHPQ 175
Query: 363 RWYETVKSTAPGYQEANEKGLEA 295
WY+ V G E +E EA
Sbjct: 176 HWYDRVLEGLVGANENSENNREA 198
>SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase
Abc4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1469
Score = 27.9 bits (59), Expect = 1.5
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +1
Query: 259 SLFKHAIDKSLECLQSFLVGLLVTRSCTLNRLVPS 363
S +K++++ L CL +L+ +TRS T+ + V S
Sbjct: 51 SWYKYSLESGLVCLYLYLIYRWITRSFTVKQTVGS 85
>SPAC20G4.08 ||SPAC4F10.01|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1076
Score = 26.6 bits (56), Expect = 3.5
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -1
Query: 372 NVKRWYETVKSTAPGYQEANEKGLEAFKGLVNS 274
+V + YE+++S Y+ ANEK EA +V+S
Sbjct: 739 SVHKNYESLRSQLLEYKAANEKHTEAILSVVSS 771
>SPBC56F2.12 |ilv5||acetohydroxyacid
reductoisomerase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 404
Score = 25.8 bits (54), Expect = 6.2
Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 8/96 (8%)
Frame = -1
Query: 546 APADKAKNEKVQEALQLLDKFLE--GQKYVAGPNLTVADLSLIA-SVSSLEASDIDFKK- 379
+PA+ A NE V+EA Q L + G Y+ T A I + LEA+ +
Sbjct: 291 SPAE-AFNETVEEATQSLYPLIGKYGLDYMFAACSTTARRGAIDWTPRFLEANKKVLNEL 349
Query: 378 YANVKRWYETVKS----TAPGYQEANEKGLEAFKGL 283
Y NV+ E +S +AP Y+E +K LE + L
Sbjct: 350 YDNVENGNEAKRSLEYNSAPNYRELYDKELEEIRNL 385
>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 630
Score = 25.4 bits (53), Expect = 8.2
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -1
Query: 489 KFLEGQKYVAGPNLTVADLSLIASVSSLEASDI 391
+F Q+Y+ + DL ++A SLEA DI
Sbjct: 459 EFQSTQRYLVLSEIGETDLDILAEPKSLEACDI 491
>SPBP35G2.13c |swc2||chromatin remodeling complex subunit Swc2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 316
Score = 25.4 bits (53), Expect = 8.2
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -3
Query: 508 SPSAAGQVPRRSEVRGRTEPHRRRPES 428
+PSAA +VP++ + + +P RR S
Sbjct: 115 TPSAASEVPKKKYKKIKVDPSARRTSS 141
>SPAC688.08 |srb8|med12|mediator complex subunit Srb8
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1233
Score = 25.4 bits (53), Expect = 8.2
Identities = 9/30 (30%), Positives = 19/30 (63%)
Frame = +1
Query: 22 KWVSHXKKRNVSIKCEQIILNLLIYFQAKG 111
+W+ KK+ + +CE +IL++L + + G
Sbjct: 1158 EWILITKKKVILEQCEYVILDILNFLKFSG 1187
>SPBC1778.04 |spo6||Spo4-Spo6 kinase complex regulatory subunit
Spo6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 474
Score = 25.4 bits (53), Expect = 8.2
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +1
Query: 277 IDKSLECLQSFLVGLLVTRSCTLNRLVPSLNVGVFLE 387
++ S CLQS L G V + + VPS NV F E
Sbjct: 216 VNTSASCLQSLLDGEKVYGTSDKDFYVPSKNVEYFRE 252
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,604,426
Number of Sequences: 5004
Number of extensions: 48621
Number of successful extensions: 164
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 162
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 335201398
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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