Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_pT_N20
(717 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0247 - 1929000-1929475,1929566-1929614,1929732-1929884 48 1e-05
01_06_0810 - 32141657-32142105,32142986-32143034,32144961-32145110 46 2e-05
01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931 43 3e-04
01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188 42 4e-04
03_01_0248 - 1932992-1933423,1933440-1933489,1933558-1933606,193... 42 5e-04
01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443 37 0.014
03_01_0246 - 1918935-1919689,1919771-1919819,1919894-1920049 37 0.018
03_04_0016 + 16461542-16461566,16462701-16462732,16463015-164631... 36 0.032
07_03_1580 + 27888275-27888360,27888755-27888871,27888964-278890... 36 0.042
01_04_0021 - 15151645-15151809,15152184-15152343,15152548-151530... 35 0.056
01_04_0029 - 15240827-15241290,15241925-15241973,15242056-15242205 35 0.074
05_01_0350 + 2736096-2736242,2736460-2736508,2736704-2737046,274... 33 0.17
10_08_0807 - 20712066-20712290,20712750-20713339,20713415-207134... 33 0.23
10_06_0131 - 11066033-11066251,11066548-11067012,11067102-110681... 33 0.30
02_02_0661 - 12731005-12731238,12732756-12732884,12732969-127331... 31 1.2
09_04_0448 + 17692650-17692970,17693461-17693811 30 2.1
03_05_1000 - 29588532-29588768,29589461-29589782,29589875-29590233 29 2.8
04_03_1007 - 21670780-21671368,21671477-21671685 29 3.7
01_01_1176 - 9372879-9373097,9373814-9374278,9374372-9375447,937... 29 3.7
10_02_0035 - 4429737-4429781,4430769-4430890,4431000-4431297,443... 29 4.9
04_04_1090 - 30764340-30764704,30765092-30765204,30765414-307656... 28 6.4
10_01_0110 + 1360699-1360873,1361301-1361524 28 8.5
03_06_0233 + 32530174-32530492,32531081-32531127,32531277-325314... 28 8.5
>03_01_0247 - 1929000-1929475,1929566-1929614,1929732-1929884
Length = 225
Score = 47.6 bits (108), Expect = 1e-05
Identities = 42/142 (29%), Positives = 66/142 (46%), Gaps = 15/142 (10%)
Frame = -1
Query: 714 ESRAIITYLVNKYXKGSS--LYPEDPKARVLVDQRLYFDIGTLYQRFSDYFYPQVFA--- 550
+SRAI YL ++ + +Y R ++Q L + + S+ + FA
Sbjct: 68 DSRAICRYLSTQFPDDGNRTIYGTGSLERASIEQWLQAEAQSFDAPSSELVFHLAFAPQL 127
Query: 549 GAPADKAK---NE-KVQEALQLLDKFLEGQKYVAGPNLTVADLS------LIASVSSLEA 400
PAD+A+ NE K+Q+ L + D+ L KY+AG T+ADLS I + S
Sbjct: 128 NIPADEARIAENERKLQQMLNVYDEILAKNKYLAGDEFTLADLSHLPNSHYIVNARSPRG 187
Query: 399 SDIDFKKYANVKRWYETVKSTA 334
+ F +V RWYE + + A
Sbjct: 188 KKL-FTSKKHVARWYEEISNRA 208
>01_06_0810 - 32141657-32142105,32142986-32143034,32144961-32145110
Length = 215
Score = 46.4 bits (105), Expect = 2e-05
Identities = 39/131 (29%), Positives = 59/131 (45%), Gaps = 10/131 (7%)
Frame = -1
Query: 717 WESRAIITYLVNKYXKGSSLYPEDPKARVLVDQRLYFDIGTLYQRFSDYFY-----PQVF 553
WESRAI Y+ K K L D K +VD L + + + P +F
Sbjct: 66 WESRAICKYVCRK-NKPELLKDGDLKESAMVDVWLEVESNQYTPALNPILFQCLIRPMMF 124
Query: 552 AGAPADKAKNE---KVQEALQLLDKFLEGQKYVAGPNLTVADLSLIASVSSLEASD--ID 388
P +K E K+++ L++ + L KY+AG ++VADLS +A L A+
Sbjct: 125 GAPPDEKVVEENLEKLKKVLEVYEARLTKCKYLAGDYISVADLSHVAGTVCLGATPHASV 184
Query: 387 FKKYANVKRWY 355
Y +VK W+
Sbjct: 185 LDAYPHVKAWW 195
>01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931
Length = 218
Score = 42.7 bits (96), Expect = 3e-04
Identities = 38/138 (27%), Positives = 60/138 (43%), Gaps = 12/138 (8%)
Frame = -1
Query: 717 WESRAIITYLVNKYX--KGSSLYPEDPKARVLVDQRLYFDIGTLYQRFSDYFYP----QV 556
+ESRAI Y++ KY K L D + LVD + Y S + +
Sbjct: 66 FESRAIAKYILRKYKSSKVDLLRESDIREAALVDVWTEVEAHQYYPALSPIVFECIIFPI 125
Query: 555 FAGAPADKA----KNEKVQEALQLLDKFLEGQKYVAGPNLTVADLSLIASVSSLEASDID 388
G P ++ EK+++ L+ + L G +Y+AG L+ ADL+ A+
Sbjct: 126 MRGVPTNQQVVHESLEKLKKVLETYEARLSGSRYLAGDFLSFADLNHFPFTFYFMATPCA 185
Query: 387 --FKKYANVKRWYETVKS 340
F Y +VK W+E + S
Sbjct: 186 SLFDAYPHVKAWWEGLMS 203
>01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188
Length = 216
Score = 42.3 bits (95), Expect = 4e-04
Identities = 42/135 (31%), Positives = 64/135 (47%), Gaps = 11/135 (8%)
Frame = -1
Query: 717 WESRAIITYLVNKYXKGSSLYPEDPKAR-VLVDQRL-----YFDIGTLYQRFSDYFYPQV 556
+ESRAI Y++ K+ GS L E + +VD L +FD F + P
Sbjct: 66 FESRAISKYILRKH--GSDLLRESNLSESAMVDVWLEVESSHFDGAMSPIIFQCFIVPMF 123
Query: 555 FAGAPADKAKNE---KVQEALQLLDKFLEGQKYVAGPNLTVADLSLIASVSSLEAS--DI 391
GA NE K+++AL++ + L KY+AG +++AD+S +V L AS
Sbjct: 124 MGGATDIGVVNESLEKLKKALEVYEAQLSKSKYLAGDFISLADISHFPTVYYLLASAHAS 183
Query: 390 DFKKYANVKRWYETV 346
+ Y VK W + V
Sbjct: 184 VLEAYPRVKAWIDDV 198
>03_01_0248 -
1932992-1933423,1933440-1933489,1933558-1933606,
1933688-1933840
Length = 227
Score = 41.9 bits (94), Expect = 5e-04
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Frame = -1
Query: 531 AKNEK-VQEALQLLDKFLEGQKYVAGPNLTVADLSLIASVSSLEASDIDFKKYA---NVK 364
A+NEK +Q+ L + D+ L +Y+AG T+ADLS + + + +S+ K + NV
Sbjct: 141 AENEKKLQQVLNVYDEILSKNEYLAGDEFTLADLSHLPNSHYIVSSERGRKLFTGRKNVA 200
Query: 363 RWYETV 346
RWY+ +
Sbjct: 201 RWYDQI 206
>01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443
Length = 221
Score = 37.1 bits (82), Expect = 0.014
Identities = 33/136 (24%), Positives = 61/136 (44%), Gaps = 10/136 (7%)
Frame = -1
Query: 717 WESRAIITYLVNKY-XKGSSLYPED---PKARVLVDQRLYFDIGTLYQRFSDYFYPQVFA 550
+ESRAI Y+ KY +G+ L P + K V ++ + + +
Sbjct: 70 YESRAINRYIATKYKAEGADLLPAEASPAKLEVWLEVESHHFYPAISGLVFQLLIKPLLG 129
Query: 549 GAPADKAKNEKVQEALQLLDKF---LEGQKYVAGPNLTVAD---LSLIASVSSLEASDID 388
GA A +E Q+LD + L G +Y+AG ++AD +S + +S +++
Sbjct: 130 GATDTAAVDEHAAALAQVLDVYDAHLAGSRYLAGNRFSLADANHMSYLLFLSKTPMAELV 189
Query: 387 FKKYANVKRWYETVKS 340
+ +VK W++ + S
Sbjct: 190 ASR-PHVKAWWDDISS 204
>03_01_0246 - 1918935-1919689,1919771-1919819,1919894-1920049
Length = 319
Score = 36.7 bits (81), Expect = 0.018
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Frame = -1
Query: 537 DKAKNEKVQEALQLLDKFLEGQKYVAGPNLTVADLSLIASVSSLEA---SDIDFKKYANV 367
+K+K + +++ L + ++ LE Y+AG T+ADLS + + L + S F+ NV
Sbjct: 192 EKSKKD-LEKLLDIYEQRLEEAAYLAGDKFTIADLSHLPNADRLASDPRSRRMFEARKNV 250
Query: 366 KRWYETVKS 340
RW+ + S
Sbjct: 251 SRWWNNISS 259
>03_04_0016 +
16461542-16461566,16462701-16462732,16463015-16463100,
16463189-16463305,16463399-16463474,16463695-16463818,
16464482-16464595,16464700-16464947
Length = 273
Score = 35.9 bits (79), Expect = 0.032
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = -1
Query: 525 NEKVQEALQLLDKFLEGQKYVAGPNLTVADLSLIASVSSLEASDIDFKKYANVKRWYETV 346
N + LQ LD++L + Y++G + D+++ S+ S A+ Y NV RWY+ +
Sbjct: 26 NVNSEAGLQKLDEYLLTRSYISGYQASKDDMTVFTSLPSAPAAS-----YVNVTRWYDHI 80
Query: 345 KS 340
+
Sbjct: 81 SA 82
>07_03_1580 +
27888275-27888360,27888755-27888871,27888964-27889045,
27889710-27889821,27889958-27890071,27890163-27890326
Length = 224
Score = 35.5 bits (78), Expect = 0.042
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = -1
Query: 510 EALQLLDKFLEGQKYVAGPNLTVADLSLIASVSSLEASDIDFKKYANVKRWYETV 346
+ L+ L++ L G+ YV+G ++ D+ + A+V S ++ + N RWY+TV
Sbjct: 12 DGLKALEQHLSGKTYVSGNAISKDDIKVFAAVPSKPGAE-----FPNAARWYDTV 61
>01_04_0021 -
15151645-15151809,15152184-15152343,15152548-15153025,
15153243-15153291,15153585-15153734
Length = 333
Score = 35.1 bits (77), Expect = 0.056
Identities = 17/60 (28%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Frame = -1
Query: 519 KVQEALQLLDKFLEGQKYVAGPNLTVADLSLIASVSSLEASDID--FKKYANVKRWYETV 346
K+++ L + + L G +Y+AG +++ADLS +++ A++ Y +VK W+E +
Sbjct: 141 KLEKVLGVYEARLSGSRYLAGDRISLADLSHFSNMRYFMATEYAGVVDAYPHVKAWWEAL 200
>01_04_0029 - 15240827-15241290,15241925-15241973,15242056-15242205
Length = 220
Score = 34.7 bits (76), Expect = 0.074
Identities = 34/134 (25%), Positives = 58/134 (43%), Gaps = 12/134 (8%)
Frame = -1
Query: 717 WESRAIITYLVNKYXKGSS--LYPEDPKARVLVDQRLYFDIGTLYQRFSDYFYPQVFA-- 550
+ESRA+ Y++ KY + L + +VD + +I Y S Y +F
Sbjct: 66 FESRAVGRYILRKYKTSEANLLREGNLTEAAMVDIGIEVEIHQYYPVISSIVYECLFNPA 125
Query: 549 --GAPADKA----KNEKVQEALQLLDKFLEGQKYVAGPNLTVADLSLIASVSSLEASDID 388
G P ++ EK+++ L++ + L Y+AG L+ DLS A+
Sbjct: 126 MYGVPTNQKVVDNSLEKLKKVLEVYEARLSQNTYLAGNFLSFVDLSHFPFTFYFMATPYA 185
Query: 387 --FKKYANVKRWYE 352
KY +VK W++
Sbjct: 186 SLLDKYPHVKAWWD 199
>05_01_0350 +
2736096-2736242,2736460-2736508,2736704-2737046,
2743911-2744499
Length = 375
Score = 33.5 bits (73), Expect = 0.17
Identities = 26/104 (25%), Positives = 52/104 (50%), Gaps = 8/104 (7%)
Frame = -1
Query: 717 WESRAIITYLVNKYXKGSSLYPEDPKARVLVDQRLYFDIG----TLYQRFSDYFYPQVFA 550
+ESRAI Y++ Y K L + + +VD + + ++ + +
Sbjct: 65 FESRAIQRYVLRNYNKPDLLREGNLEESAMVDMWMEVEAHHYDPAIFHIIRECVIKPMIG 124
Query: 549 GAPADKA---KN-EKVQEALQLLDKFLEGQKYVAGPNLTVADLS 430
G D+A +N EK+++ L++ ++ L +Y+AG ++VADL+
Sbjct: 125 GGARDQAIVDENVEKLRKVLEVYERRLSESEYLAGDFVSVADLN 168
>10_08_0807 -
20712066-20712290,20712750-20713339,20713415-20713463,
20713669-20713821
Length = 338
Score = 33.1 bits (72), Expect = 0.23
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Frame = -1
Query: 525 NEKVQEALQLLDKFLEGQKYVAGPNLTVADLSLIASVSSLEASDIDFK---KYANVKRWY 355
++++ + L + ++ LE +Y+AG T+ADLS + + L A + NV RW+
Sbjct: 194 SKELSKVLDIYEQRLEEAEYLAGDKFTLADLSHLPNADRLAADPRTLRMLQSRRNVSRWW 253
Query: 354 ETV 346
V
Sbjct: 254 ADV 256
>10_06_0131 -
11066033-11066251,11066548-11067012,11067102-11068177,
11068269-11068422,11068511-11068601,11069016-11069152
Length = 713
Score = 32.7 bits (71), Expect = 0.30
Identities = 20/77 (25%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Frame = -1
Query: 507 ALQLLDKFLEGQKYVAGPNLTVADLSL---IASVSSLEASDIDFKKYANVKRWYETVKST 337
A +D +L + ++ G LT+AD+++ +A + S KKY N+ RW+ + S
Sbjct: 96 ACSFVDGYLMSRTFLVGHVLTIADITVWSNLAGIGQRWESLRKSKKYQNLVRWFNGIDS- 154
Query: 336 APGYQEANEKGLEAFKG 286
Y++ + + A+ G
Sbjct: 155 --DYKDTLNEVIAAYVG 169
>02_02_0661 -
12731005-12731238,12732756-12732884,12732969-12733193,
12733302-12733478,12733576-12733788
Length = 325
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = -1
Query: 543 PADKAKNEKVQEALQLLDKFLEGQKYVAGPNLTVADLSLIASVSSL-EASDIDFKKYANV 367
P D+A ++ EAL ++ L Q+Y+ G LT AD+ L ++ E + FK +
Sbjct: 202 PYDEAVT-RLYEALDKCEEILSRQRYICGNQLTEADVRLFVTLIRFDEVYAVHFKCNKRL 260
Query: 366 KRWY 355
R Y
Sbjct: 261 LREY 264
>09_04_0448 + 17692650-17692970,17693461-17693811
Length = 223
Score = 29.9 bits (64), Expect = 2.1
Identities = 21/94 (22%), Positives = 37/94 (39%)
Frame = -1
Query: 714 ESRAIITYLVNKYXKGSSLYPEDPKARVLVDQRLYFDIGTLYQRFSDYFYPQVFAGAPAD 535
ES I+ Y+ + G + P DP R + F ++ + YP
Sbjct: 68 ESTVIVEYIDEAWKHGYPIMPSDPFDRA----QARFWARFAEEKCNAALYPIFMTTGEEQ 123
Query: 534 KAKNEKVQEALQLLDKFLEGQKYVAGPNLTVADL 433
+ + Q+ L+ L+ LEG+K+ G D+
Sbjct: 124 RKLVHEAQQCLKTLETALEGKKFFGGDAFGYLDI 157
>03_05_1000 - 29588532-29588768,29589461-29589782,29589875-29590233
Length = 305
Score = 29.5 bits (63), Expect = 2.8
Identities = 18/43 (41%), Positives = 21/43 (48%)
Frame = -3
Query: 565 SPSIRRCPSRQGQEREGTGSPSAAGQVPRRSEVRGRTEPHRRR 437
S S RR PS+Q G+GS S P + R PHRRR
Sbjct: 11 SVSARRLPSKQPGRHGGSGSSSVPNPYPLFATT--RLLPHRRR 51
>04_03_1007 - 21670780-21671368,21671477-21671685
Length = 265
Score = 29.1 bits (62), Expect = 3.7
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
Frame = -1
Query: 534 KAKNEKVQEALQLLDKFLEGQKYVAGPNLTVADLSLIASVSSLEASDIDFKKYANVK--- 364
K E++ + L ++ L KY+AG + AD I ++ + D+D ++Y N +
Sbjct: 161 KQSEEELSKLLDDVEAQLNNGKYLAGDEFSPADSVFIPILARITLLDLD-EEYINCRPRL 219
Query: 363 RWYETVKSTAPGYQEANEKGLEAFK 289
Y T+ P Y+ A K +K
Sbjct: 220 LEYYTLVKQRPSYKVAIGKFFGGWK 244
>01_01_1176 -
9372879-9373097,9373814-9374278,9374372-9375447,
9375534-9375687,9375783-9375879,9376238-9376374
Length = 715
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = -1
Query: 513 QEALQLLDKFLEGQKYVAGPNLTVADL---SLIASVSSLEASDIDFKKYANVKRWYETV 346
+ A LD +L + ++ L++AD+ S +A S KKY N+ RW+ ++
Sbjct: 96 EAACSFLDGYLASRTFLVSYGLSIADIVVWSNLAGTGQRWESLRRSKKYQNLVRWFNSI 154
>10_02_0035 -
4429737-4429781,4430769-4430890,4431000-4431297,
4431644-4431682
Length = 167
Score = 28.7 bits (61), Expect = 4.9
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = -3
Query: 541 SRQGQEREGTGSPSAAGQVPRRSEVRGRTEPHRRRPESHRQCLQPGS 401
+R +R+G +P +G RRS GR + R+ E C QP S
Sbjct: 52 ARGSSDRQGAAAPRGSGVEQRRSGWPGR-QARGRQQEEQVSCEQPRS 97
>04_04_1090 - 30764340-30764704,30765092-30765204,30765414-30765638,
30766432-30766553,30766617-30767174,30769207-30769477,
30772175-30773256
Length = 911
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 4/53 (7%)
Frame = -3
Query: 547 CPSRQGQEREGTGSPSAAGQ----VPRRSEVRGRTEPHRRRPESHRQCLQPGS 401
C +R+G R G G+ PR+ V+G RRR E R+ P S
Sbjct: 842 CAARRGAARRAEGDIVGGGKPSSHAPRQDRVQGDGHRARRRREERRRLPPPSS 894
>10_01_0110 + 1360699-1360873,1361301-1361524
Length = 132
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -3
Query: 544 PSRQGQEREGTGSPSAAGQVPRRSEVRGRTEPHRRRPESHRQCL 413
P Q + R +G+ R V+GR P RR+ E HR+ L
Sbjct: 23 PEAQEESRAVAAEAHCSGRRLGRCRVQGRASPQRRQ-EPHRRAL 65
>03_06_0233 +
32530174-32530492,32531081-32531127,32531277-32531413,
32531673-32531841,32532598-32532885,32533021-32533107,
32533454-32534152,32534244-32534735
Length = 745
Score = 27.9 bits (59), Expect = 8.5
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = -3
Query: 565 SPSIRRCPSRQGQEREGTGSPSAAGQVPRRSEVRGRTEPH-RRRPESHRQCLQPGS 401
S S+ + P RQG E GT PS++ + V+ +P P S + + GS
Sbjct: 485 SCSMSKQPVRQGNEPNGTSDPSSSQKFQPMDSVKHSLDPELNGSPSSKDKLRKDGS 540
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,715,385
Number of Sequences: 37544
Number of extensions: 315626
Number of successful extensions: 930
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 912
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 925
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1862792824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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