Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_pT_N20
(717 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132949-28|CAB61106.1| 209|Caenorhabditis elegans Hypothetical... 38 0.009
Z66560-1|CAA91449.1| 214|Caenorhabditis elegans Hypothetical pr... 36 0.022
AL132949-27|CAB61105.1| 209|Caenorhabditis elegans Hypothetical... 35 0.067
Z80217-4|CAB02290.1| 213|Caenorhabditis elegans Hypothetical pr... 34 0.088
Z50859-1|CAA90726.1| 208|Caenorhabditis elegans Hypothetical pr... 34 0.12
AC024200-13|AAF36004.1| 214|Caenorhabditis elegans Glutathione ... 31 0.62
AL132949-29|CAB61107.1| 209|Caenorhabditis elegans Hypothetical... 31 0.82
Z99279-2|CAD89758.1| 500|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z99279-1|CAB16496.4| 598|Caenorhabditis elegans Hypothetical pr... 30 1.4
AL132949-25|CAB61103.1| 209|Caenorhabditis elegans Hypothetical... 30 1.9
U53344-4|AAA96225.2| 575|Caenorhabditis elegans Hypothetical pr... 29 2.5
AC087794-12|AAG53708.1| 209|Caenorhabditis elegans Glutathione ... 29 4.4
U70857-3|AAN84873.1| 950|Caenorhabditis elegans Na/ca exchanger... 28 7.7
U70857-2|AAM29660.1| 975|Caenorhabditis elegans Na/ca exchanger... 28 7.7
U70857-1|AAM29661.1| 925|Caenorhabditis elegans Na/ca exchanger... 28 7.7
AJ001181-1|CAA04574.1| 925|Caenorhabditis elegans sodium-calciu... 28 7.7
>AL132949-28|CAB61106.1| 209|Caenorhabditis elegans Hypothetical
protein Y53F4B.32 protein.
Length = 209
Score = 37.5 bits (83), Expect = 0.009
Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 8/112 (7%)
Frame = -1
Query: 714 ESRAIITYLVNKYXKGSSLYPEDPKARVLVDQRLYFDIGTLYQRF--------SDYFYPQ 559
+S AII YL NK+ E A +VDQ + D +L++ F SD +
Sbjct: 65 QSAAIIRYLANKFGYAGKTPEEQAWADAIVDQ--FKDFMSLFREFKLAQKAGKSDVEIAK 122
Query: 558 VFAGAPADKAKNEKVQEALQLLDKFLEGQKYVAGPNLTVADLSLIASVSSLE 403
V A A A++ + LL+K G ++ G LT AD+ ++ S+++LE
Sbjct: 123 V-ASEVAIPARDSYFEIITNLLEKSKSG--FLVGDGLTFADIVVVESLTNLE 171
>Z66560-1|CAA91449.1| 214|Caenorhabditis elegans Hypothetical
protein D1053.1 protein.
Length = 214
Score = 36.3 bits (80), Expect = 0.022
Identities = 39/128 (30%), Positives = 56/128 (43%), Gaps = 5/128 (3%)
Frame = -1
Query: 714 ESRAIITYLVNKYXKGSSLYPEDPKARV---LVDQRLYFDIGTLYQRFSDYFYPQVFAGA 544
ES AII YL + L P+DP R + + I L+ + AG
Sbjct: 68 ESLAIIEYLEETHPD-VPLLPKDPIKRAHARAISLLVASGIQPLHNLKVLQLLNKKEAGF 126
Query: 543 PADKAKNEKVQ--EALQLLDKFLEGQKYVAGPNLTVADLSLIASVSSLEASDIDFKKYAN 370
AK V+ AL++L K G KY G ++T+ADLS+ + S ++D Y
Sbjct: 127 GGQFAKQFVVEGLTALEILLKQHSG-KYAVGDDVTIADLSIPPLIYSANRFNLDLSPYPT 185
Query: 369 VKRWYETV 346
V R ET+
Sbjct: 186 VNRINETL 193
>AL132949-27|CAB61105.1| 209|Caenorhabditis elegans Hypothetical
protein Y53F4B.31 protein.
Length = 209
Score = 34.7 bits (76), Expect = 0.067
Identities = 31/114 (27%), Positives = 56/114 (49%), Gaps = 6/114 (5%)
Frame = -1
Query: 714 ESRAIITYLVNKYXKGSSLYPEDPKARVLVDQRLYFDIGTLYQRFSDYFYPQVFAGAPAD 535
+S AII YL NK+ E A +VDQ F +G+ +R +F + +
Sbjct: 65 QSAAIIRYLANKFGYAGKTPEEQVWADAIVDQFKDF-MGSFRERIMAHFAGK--SQEEIA 121
Query: 534 KAKNEKVQEA----LQLLDKFLEGQK--YVAGPNLTVADLSLIASVSSLEASDI 391
K +E V A ++L+ LE K ++ G ++T AD+ + ++++LE + +
Sbjct: 122 KITSEVVIPARDSYFKILNGLLEKSKSGFLVGDSITFADIVISENITTLEKNQL 175
>Z80217-4|CAB02290.1| 213|Caenorhabditis elegans Hypothetical
protein F37B1.4 protein.
Length = 213
Score = 34.3 bits (75), Expect = 0.088
Identities = 40/138 (28%), Positives = 61/138 (44%), Gaps = 12/138 (8%)
Frame = -1
Query: 714 ESRAIITYLVNKYXKGSSLYPEDPKARVLVDQRLYFDIGTLYQRFSDYFYPQVFAGAPAD 535
+S AI YL K+ E+ A +VDQ F + F+ AG P +
Sbjct: 67 QSAAICRYLAKKFGYAGKTPEEEAWADAVVDQFKDFSVAFKTLLFATR------AGKPEE 120
Query: 534 ---KAKNEKVQEALQ----LLDKFLEGQK--YVAGPNLTVADLSLIASVSSLE---ASDI 391
K + E A LL++ L+ K Y+ G LT ADL + ++ SLE A D
Sbjct: 121 EILKIRYEIFNPARDVYFILLNRILKKSKSGYLVGDGLTWADLVIADNLHSLEKLRAIDD 180
Query: 390 DFKKYANVKRWYETVKST 337
D + + N+K++ E + T
Sbjct: 181 DDEGHQNLKKYKEKIYGT 198
>Z50859-1|CAA90726.1| 208|Caenorhabditis elegans Hypothetical
protein T26C5.1 protein.
Length = 208
Score = 33.9 bits (74), Expect = 0.12
Identities = 32/112 (28%), Positives = 49/112 (43%), Gaps = 9/112 (8%)
Frame = -1
Query: 714 ESRAIITYLVNKYXKGSSLYPEDPKARVLVDQRLYFDIGTLYQRFSDYFYPQVFAG---A 544
+S AI YL K+ E VDQ F Y DY+Y + G
Sbjct: 63 QSMAIARYLAKKFGFAGKTAEESAMVDAFVDQFKDF-----YSEIRDYYYTMLGLGLTDL 117
Query: 543 PADKAKNEKVQEA----LQLLDKFLEGQK--YVAGPNLTVADLSLIASVSSL 406
D+ K++ + A L LL ++LE K ++ LT ADL ++ +++SL
Sbjct: 118 DGDEQKDKVLIPARDKFLPLLTRYLEKSKSGFLVDGGLTFADLIILDNMTSL 169
>AC024200-13|AAF36004.1| 214|Caenorhabditis elegans Glutathione
s-transferase protein43 protein.
Length = 214
Score = 31.5 bits (68), Expect = 0.62
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = -1
Query: 525 NEKVQEALQLLDKFLEGQ--KYVAGPNLTVADLSLIASVSSLEASDIDFKKYANVKR 361
N V + L++ L+ KY G LT+AD++L + + + + +D KY + R
Sbjct: 132 NHFVNKGFLALEELLKKHSGKYCVGDQLTIADINLPSIIYNAKIYKVDMSKYPTITR 188
>AL132949-29|CAB61107.1| 209|Caenorhabditis elegans Hypothetical
protein Y53F4B.33 protein.
Length = 209
Score = 31.1 bits (67), Expect = 0.82
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 9/113 (7%)
Frame = -1
Query: 714 ESRAIITYLVNKYXKGSSLYPEDPKARVLVDQRLYFDIGTLYQRFSDYFYPQVFAGAPAD 535
+S AII YL NK+ E A +VDQ F +G F Q +G PA+
Sbjct: 65 QSAAIIRYLANKFGYAGKTPEEQAWADAIVDQFKDF-MGA----FRQLIMAQ-RSGKPAE 118
Query: 534 KAKNEKVQEAL-------QLLDKFLEGQK--YVAGPNLTVADLSLIASVSSLE 403
+ + A+ ++L+ LE K ++ G LT AD+ ++ ++++LE
Sbjct: 119 EIAKISSEVAIPARDSYFKILNGLLEKSKSGFLVGDGLTFADIVVVENLTTLE 171
>Z99279-2|CAD89758.1| 500|Caenorhabditis elegans Hypothetical
protein Y57G11A.1b protein.
Length = 500
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -1
Query: 438 DLSLIASVSSLEASDIDFKKYANVK-RWYETVKSTAPGYQEANEKGLEAFKGLVN 277
D ++I E +++F+ ++K +W E TA + A K LEA KG V+
Sbjct: 78 DPNIIRGSKKAEKVELNFENVGDIKNKWKEGNVETAEAKEAAERKELEALKGGVS 132
>Z99279-1|CAB16496.4| 598|Caenorhabditis elegans Hypothetical
protein Y57G11A.1a protein.
Length = 598
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -1
Query: 438 DLSLIASVSSLEASDIDFKKYANVK-RWYETVKSTAPGYQEANEKGLEAFKGLVN 277
D ++I E +++F+ ++K +W E TA + A K LEA KG V+
Sbjct: 78 DPNIIRGSKKAEKVELNFENVGDIKNKWKEGNVETAEAKEAAERKELEALKGGVS 132
>AL132949-25|CAB61103.1| 209|Caenorhabditis elegans Hypothetical
protein Y53F4B.29 protein.
Length = 209
Score = 29.9 bits (64), Expect = 1.9
Identities = 30/117 (25%), Positives = 52/117 (44%), Gaps = 9/117 (7%)
Frame = -1
Query: 714 ESRAIITYLVNKYXKGSSLYPEDPKARVLVDQRLYFDIGTLYQRFSDYFYPQVFAGAPAD 535
+S AII YL NK+ E A +VDQ F +G+ + + AG PA+
Sbjct: 65 QSAAIIRYLANKFGYAGKTPEEQAWADAIVDQFKDF-MGSFREVGKAH-----AAGKPAE 118
Query: 534 KAKNEKVQEALQLLDKF-------LEGQK--YVAGPNLTVADLSLIASVSSLEASDI 391
+ + + D F LE K ++ G LT AD+ ++ +++L+ + +
Sbjct: 119 EIAKIMQSDVVPARDAFFVIINGILEKSKSGFLVGDGLTFADIVVVECITTLDKNQL 175
>U53344-4|AAA96225.2| 575|Caenorhabditis elegans Hypothetical
protein T07H6.5 protein.
Length = 575
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 510 PVPSRSWPCRLGHRRILGDRNNH*ISGTKFRCRN 611
P+ +WP R+ H RIL +++H S K+ C N
Sbjct: 375 PLSCHNWPPRVPHARILFSKSSH-GSIAKYECNN 407
>AC087794-12|AAG53708.1| 209|Caenorhabditis elegans Glutathione
s-transferase protein37 protein.
Length = 209
Score = 28.7 bits (61), Expect = 4.4
Identities = 31/116 (26%), Positives = 52/116 (44%), Gaps = 8/116 (6%)
Frame = -1
Query: 714 ESRAIITYLVNKYXKGSSLYPEDPKARVLVDQRLYFDIGTLYQRFSDYFYPQVFAGAPAD 535
+S AII YL NK+ E + DQ F + F D ++ P +
Sbjct: 65 QSHAIIRYLGNKFGYAGQTPEEKAWVDAICDQVKDFMV-----PFRDLILAEMAGKKPDE 119
Query: 534 KAKNEKV-----QEA-LQLLDKFLEGQK--YVAGPNLTVADLSLIASVSSLEASDI 391
AK K ++A + ++K L K ++ G LT ADL ++ +V++LE + +
Sbjct: 120 IAKLAKETFVPGRDAYFKSINKILGKSKSGFLVGDKLTFADLVVVENVTTLEKNKL 175
>U70857-3|AAN84873.1| 950|Caenorhabditis elegans Na/ca exchangers
protein 2, isoformd protein.
Length = 950
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +1
Query: 382 LEVNVRGFQAGDTGDETQVG 441
+EV RGF+AGD G T VG
Sbjct: 135 IEVIARGFEAGDLGPNTIVG 154
>U70857-2|AAM29660.1| 975|Caenorhabditis elegans Na/ca exchangers
protein 2, isoforma protein.
Length = 975
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +1
Query: 382 LEVNVRGFQAGDTGDETQVG 441
+EV RGF+AGD G T VG
Sbjct: 135 IEVIARGFEAGDLGPNTIVG 154
>U70857-1|AAM29661.1| 925|Caenorhabditis elegans Na/ca exchangers
protein 2, isoformb protein.
Length = 925
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +1
Query: 382 LEVNVRGFQAGDTGDETQVG 441
+EV RGF+AGD G T VG
Sbjct: 135 IEVIARGFEAGDLGPNTIVG 154
>AJ001181-1|CAA04574.1| 925|Caenorhabditis elegans sodium-calcium
exchanger protein.
Length = 925
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +1
Query: 382 LEVNVRGFQAGDTGDETQVG 441
+EV RGF+AGD G T VG
Sbjct: 135 IEVIARGFEAGDLGPNTIVG 154
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,332,564
Number of Sequences: 27780
Number of extensions: 271062
Number of successful extensions: 743
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 709
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 741
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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