Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_N15
         (758 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-2353|AAF49763.1|  151|Drosophila melanogaster CG13484-P...    35   0.10 
BT024201-1|ABC86263.1|  283|Drosophila melanogaster RE46661p pro...    29   9.1  
AE014297-1044|AAF54453.1|  233|Drosophila melanogaster CG8500-PA...    29   9.1  

>AE014296-2353|AAF49763.1|  151|Drosophila melanogaster CG13484-PA
           protein.
          Length = 151

 Score = 35.1 bits (77), Expect = 0.10
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = -3

Query: 747 GPSIDAYLHPSMLEDPWAQLRQ 682
           G S   Y HPSMLEDPW +L +
Sbjct: 109 GSSFGQYFHPSMLEDPWRELME 130


>BT024201-1|ABC86263.1|  283|Drosophila melanogaster RE46661p
           protein.
          Length = 283

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -2

Query: 694 STSPKHEIMTYKSICSKQVFDEMDSIFVVINNLK 593
           S S  H  +   S+CSKQ  +E+  I+ +I  LK
Sbjct: 86  SISKGHAFILVYSVCSKQSLEELRPIWALIKELK 119


>AE014297-1044|AAF54453.1|  233|Drosophila melanogaster CG8500-PA
           protein.
          Length = 233

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -2

Query: 694 STSPKHEIMTYKSICSKQVFDEMDSIFVVINNLK 593
           S S  H  +   S+CSKQ  +E+  I+ +I  LK
Sbjct: 86  SISKGHAFILVYSVCSKQSLEELRPIWALIKELK 119


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,434,123
Number of Sequences: 53049
Number of extensions: 488994
Number of successful extensions: 960
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 922
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 952
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3478915869
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)