Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_N14
         (650 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          26   0.27 
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        24   1.5  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   7.8  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   7.8  

>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 26.2 bits (55), Expect = 0.27
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = -1

Query: 134 MFNKYYIISSVLLFWITKTQFDXL 63
           + +KY +I+S  L W+ +T +D L
Sbjct: 28  ILSKYQLITSTTLNWLPRTHYDHL 51


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 14/50 (28%), Positives = 20/50 (40%)
 Frame = +3

Query: 270 SSPQNAHQSLTTIPAATTSLPLLTVPATKGTXXXXXXXXXXCIFVFGCTS 419
           SSPQ++  S +T PAA T+  +    +                  FG TS
Sbjct: 67  SSPQHSGSSASTSPAARTTSSMYPYVSAAAAHHHHQQQQAVAAAAFGATS 116


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/23 (30%), Positives = 15/23 (65%)
 Frame = -2

Query: 583 GNVIACNDYVALVHPDLDKDTEE 515
           GN ++C +  +L++ + D  T+E
Sbjct: 102 GNALSCKETFSLLYYEFDVATKE 124


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +1

Query: 301 PPFQQLRHH 327
           PP QQL HH
Sbjct: 809 PPHQQLHHH 817


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,017
Number of Sequences: 438
Number of extensions: 3393
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)