Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_pT_N11
(773 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 32 0.023
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein. 31 0.040
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 30 0.069
AJ297931-1|CAC35451.1| 166|Anopheles gambiae hypothetical prote... 27 0.85
DQ137801-1|AAZ78362.1| 622|Anopheles gambiae male-specific doub... 25 2.6
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 25 3.4
AJ439060-14|CAD27765.1| 471|Anopheles gambiae putative acetyltr... 25 3.4
AJ130951-1|CAA10260.1| 189|Anopheles gambiae SG3 protein protein. 25 3.4
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 25 3.4
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein. 24 4.5
AY846632-1|AAW31598.1| 412|Anopheles gambiae SAGLIN protein. 23 7.9
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro... 23 7.9
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 31.9 bits (69), Expect = 0.023
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +3
Query: 366 PSPLRLPEISGCYQRHGAPPQAQRFWIRRTRHA 464
P PL + E + C+QR+ A P+A R IRR A
Sbjct: 842 PHPLLIKEDARCHQRYLADPEASRAVIRREERA 874
>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
Length = 1187
Score = 31.1 bits (67), Expect = 0.040
Identities = 26/150 (17%), Positives = 60/150 (40%)
Frame = -3
Query: 675 AKLSEASQAADESERARKVLENRSLADEERMDALENQLKEARFLAEEADKKYDEVARKLA 496
A+ ++ +A + K+ + + + E A E LK ++ +EE+ K + + +
Sbjct: 760 ARETQTQCSAKVKDLQAKIADGKGHRERELKSA-EEDLKRSKKKSEESRKNWKKHEQDFE 818
Query: 495 MVEADLXXXXXXXXXXXSKIVELEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTT 316
++ ++ + V+LEE++ + L + + ++ K QIK
Sbjct: 819 TLKLEIEELQKGIVTAKEQAVKLEEQIAALQQRLVEVSGTTDEMTAAVTALKQQIKQHKE 878
Query: 315 RLKXXXXXXXXXXRSVQKLQKEVDRLEDEL 226
++ KL K+ D L+ E+
Sbjct: 879 KMNSQSKELKAKYHQRDKLLKQNDELKLEI 908
Score = 26.2 bits (55), Expect = 1.1
Identities = 20/114 (17%), Positives = 47/114 (41%)
Frame = -3
Query: 687 ATATAKLSEASQAADESERARKVLENRSLADEERMDALENQLKEARFLAEEADKKYDEVA 508
A +L E S DE A L+ + +E+M++ +LK ++ K+ DE+
Sbjct: 846 AALQQRLVEVSGTTDEMTAAVTALKQQIKQHKEKMNSQSKELKAKYHQRDKLLKQNDELK 905
Query: 507 RKLAMVEADLXXXXXXXXXXXSKIVELEEELRVVGNNLKSLEVSEEKANQREEE 346
++ E ++ +I +E++ + + + V + + +E+
Sbjct: 906 LEIKKKENEITKVRNENKDGYDRISGMEQKYPWIPEDKEFFGVKNTRYDYNKED 959
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 30.3 bits (65), Expect = 0.069
Identities = 22/133 (16%), Positives = 56/133 (42%)
Frame = -3
Query: 624 KVLENRSLADEERMDALENQLKEARFLAEEADKKYDEVARKLAMVEADLXXXXXXXXXXX 445
KVL+ + +++D L + + + +++ + K+ +E ++
Sbjct: 896 KVLQTKINGLGKQIDKLSANISKLTVEIKTSERNVQKSKDKINSMEDEVEAAQSAIRKGN 955
Query: 444 SKIVELEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXRSVQ 265
+ +LEEE + L+ ++++ EKA++ K +I L R + +Q
Sbjct: 956 DERTQLEEEANKLREELEEMKLAIEKAHEGSSSIKKEIVALQKREAEGKMKRLEFEQILQ 1015
Query: 264 KLQKEVDRLEDEL 226
++ ++ +D L
Sbjct: 1016 TIETKLQETKDTL 1028
Score = 25.0 bits (52), Expect = 2.6
Identities = 34/159 (21%), Positives = 56/159 (35%), Gaps = 3/159 (1%)
Frame = -3
Query: 669 LSEASQAADESERARKVLENRSLADEERMDALENQLKEARFLAEEADKKYDEVARKLAMV 490
L E + E E R +E DAL+ + E L +E K+YDE+
Sbjct: 315 LCEQKRKIGEFEVERDQAAGILAKHDETYDALKAERVEKEKLVKEEIKQYDELVSAKESK 374
Query: 489 EADLXXXXXXXXXXXSKIVELEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTRL 310
E+ L + + E + L+ + E++ + ++ K K +
Sbjct: 375 ESTLKNSLDKFAKVQANMRATNERRK---KTLEQIAAEEKRLLELQDVPKKNKKEIEESE 431
Query: 309 KXXXXXXXXXXRSVQKLQKEVDRLEDE---LVAEKEKXQ 202
KL + L+DE L+ EKEK Q
Sbjct: 432 AKIESLTRQKTEVEAKLTANLATLKDETKVLLEEKEKLQ 470
>AJ297931-1|CAC35451.1| 166|Anopheles gambiae hypothetical protein
protein.
Length = 166
Score = 26.6 bits (56), Expect = 0.85
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 7/51 (13%)
Frame = -3
Query: 642 ESERARKVLENRSLADEERMDALE-------NQLKEARFLAEEADKKYDEV 511
+ E + E + ADEE D E ++L+EAR +AEE +++ E+
Sbjct: 76 DEEHLEEEQEEEAEADEEEADESESEESEESDELEEARLVAEELEERQQEL 126
>DQ137801-1|AAZ78362.1| 622|Anopheles gambiae male-specific
doublesex protein protein.
Length = 622
Score = 25.0 bits (52), Expect = 2.6
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -3
Query: 396 LKSLEVSEEKANQREEEYKNQIKTLTTRLK 307
LKS + +KA+QR +E K IKT +K
Sbjct: 219 LKSADGDVQKAHQRIDEGKRTIKTYEALVK 248
>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
Length = 1229
Score = 24.6 bits (51), Expect = 3.4
Identities = 15/67 (22%), Positives = 31/67 (46%)
Frame = -3
Query: 408 VGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXRSVQKLQKEVDRLEDE 229
+ N K +E + +A +R+E+ + IKT L+ + V ++ + L+ E
Sbjct: 427 IEENYKKIESEKNEALKRQEKLIDHIKTSRLGLEEQKRIKAELSQDVGTSKERIHELQSE 486
Query: 228 LVAEKEK 208
L +E+
Sbjct: 487 LDNVREQ 493
>AJ439060-14|CAD27765.1| 471|Anopheles gambiae putative
acetyltransferase protein.
Length = 471
Score = 24.6 bits (51), Expect = 3.4
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +3
Query: 597 PPTTCSRAPYVRARIHRRPGWPRTAWRWRSRDAPRT 704
PP S PY+ IHR P R + + PR+
Sbjct: 230 PPPPTSNEPYLVVPIHRHPELKEQCVRLINTEWPRS 265
>AJ130951-1|CAA10260.1| 189|Anopheles gambiae SG3 protein protein.
Length = 189
Score = 24.6 bits (51), Expect = 3.4
Identities = 15/34 (44%), Positives = 16/34 (47%), Gaps = 4/34 (11%)
Frame = +3
Query: 534 PPQRGTWLPSADSRGRP--CAP--HPPTTCSRAP 623
PP R W P GRP P H PTT + AP
Sbjct: 90 PPFRPPWHPRPPFGGRPWWLRPPFHRPTTSTAAP 123
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 24.6 bits (51), Expect = 3.4
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = -1
Query: 380 SQRRRPTNAKRSTKIRSKPSPPV*RRLKHVPSSP-SVPCRNCKRRSIGLKTNLSPKRRNX 204
++ PT ++ S P PP+ R + +P SP + R +R + L+ +RR
Sbjct: 1088 NEAAEPTGEVEEEEV-SPPVPPIPPRSRRLPPSPRTTEMRRRRRNYMQLQYR---RRRRD 1143
Query: 203 KDIGD 189
++GD
Sbjct: 1144 GELGD 1148
>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
Length = 1036
Score = 24.2 bits (50), Expect = 4.5
Identities = 26/110 (23%), Positives = 46/110 (41%), Gaps = 14/110 (12%)
Frame = -3
Query: 594 EERMDALENQLKEAR-----------FLAEEADKKYDEVARKLAMVEADLXXXXXXXXXX 448
E R++ALE QL+ R +A +A +Y+E+ + DL
Sbjct: 198 EARLEALEAQLQSMRAREEFQQQIHVCMARKAWLEYEELFLLYSATLKDLKLAKKCTEEK 257
Query: 447 XSKIVELEEELRVVGNNLKSLEVSEEK---ANQREEEYKNQIKTLTTRLK 307
+ + ++E+ + K LE S+ K QR + N ++ T RL+
Sbjct: 258 EQQYNQFKQEMEAILARKKELETSKAKQVAIGQRSTDEINSLEEKTERLE 307
>AY846632-1|AAW31598.1| 412|Anopheles gambiae SAGLIN protein.
Length = 412
Score = 23.4 bits (48), Expect = 7.9
Identities = 12/51 (23%), Positives = 23/51 (45%)
Frame = -3
Query: 384 EVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXRSVQKLQKEVDRLED 232
++ ++ Q E+E++ TL +L + LQK++D L D
Sbjct: 99 QLLDDAQRQMEQEHRQYAATLEEQLHAAQQETQQEQEMKKALQKQLDALTD 149
>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
Length = 2051
Score = 23.4 bits (48), Expect = 7.9
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = -3
Query: 666 SEASQAADESERARKVLENRSLADEERMDALENQLKEARFLAEEADKKY 520
SE+S ++DES+ ++ S + EER E+ ++ ++ +E KY
Sbjct: 1926 SESSSSSDESD------DSNSSSSEERKPNREHFFEKQQYTEKECPVKY 1968
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 652,386
Number of Sequences: 2352
Number of extensions: 12606
Number of successful extensions: 53
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 53
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80665782
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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