Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_N08
         (775 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70781-7|CAJ55254.1|  380|Caenorhabditis elegans Hypothetical pr...    38   0.008
Z70781-6|CAA94831.2|  349|Caenorhabditis elegans Hypothetical pr...    38   0.008
EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of g...    29   3.7  
AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical ...    29   3.7  
Z67881-3|CAD44099.1| 1405|Caenorhabditis elegans Hypothetical pr...    29   4.9  
Z50797-11|CAA90676.2| 1405|Caenorhabditis elegans Hypothetical p...    29   4.9  

>Z70781-7|CAJ55254.1|  380|Caenorhabditis elegans Hypothetical
           protein F57A8.2b protein.
          Length = 380

 Score = 37.9 bits (84), Expect = 0.008
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = -2

Query: 651 GTKRRVYFLLFVAITQPLLCWWLT 580
           G KR++  + FV ITQPL+ WWLT
Sbjct: 302 GRKRKLILVAFVVITQPLIMWWLT 325


>Z70781-6|CAA94831.2|  349|Caenorhabditis elegans Hypothetical
           protein F57A8.2a protein.
          Length = 349

 Score = 37.9 bits (84), Expect = 0.008
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = -2

Query: 651 GTKRRVYFLLFVAITQPLLCWWLT 580
           G KR++  + FV ITQPL+ WWLT
Sbjct: 302 GRKRKLILVAFVVITQPLIMWWLT 325


>EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of glp-1
            protein.
          Length = 1492

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -2

Query: 747  GSQGPEQPSYGFPNPPYAA 691
            G+QGP   SYG P PP A+
Sbjct: 1042 GAQGPPPASYGAPTPPQAS 1060


>AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical
            protein Y53H1C.2a protein.
          Length = 1512

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -2

Query: 747  GSQGPEQPSYGFPNPPYAA 691
            G+QGP   SYG P PP A+
Sbjct: 1062 GAQGPPPASYGAPTPPQAS 1080


>Z67881-3|CAD44099.1| 1405|Caenorhabditis elegans Hypothetical
           protein T22H6.6a protein.
          Length = 1405

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = -2

Query: 744 SQGPEQPSYGFPNPPYAANPYSDAWDKPTPGGTKRRVY 631
           S  P QPS   P PP  + P SD   +P P     R++
Sbjct: 80  SSPPNQPSDDVP-PPQTSQPSSDTTAEPLPSPAATRIH 116


>Z50797-11|CAA90676.2| 1405|Caenorhabditis elegans Hypothetical
           protein T22H6.6a protein.
          Length = 1405

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = -2

Query: 744 SQGPEQPSYGFPNPPYAANPYSDAWDKPTPGGTKRRVY 631
           S  P QPS   P PP  + P SD   +P P     R++
Sbjct: 80  SSPPNQPSDDVP-PPQTSQPSSDTTAEPLPSPAATRIH 116


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,666,725
Number of Sequences: 27780
Number of extensions: 269975
Number of successful extensions: 841
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 778
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 840
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)