Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_N06
         (722 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0354 - 3887790-3890204                                           31   1.2  
04_01_0603 - 7931162-7931446,7932217-7932718,7932824-7934925           31   1.2  
06_03_0788 - 24603849-24603949,24604030-24604123,24604206-246044...    29   3.7  
01_06_1713 - 39359558-39359590,39360000-39360074,39360437-393606...    29   4.9  
11_01_0193 - 1534051-1534092,1536343-1537065                           28   8.6  

>10_01_0354 - 3887790-3890204
          Length = 804

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 19/89 (21%), Positives = 46/89 (51%)
 Frame = -1

Query: 641 LVHSLFVCYIMLEMIDESIGTIRGQKYYNEKYQKTIEEYKNRMIVLPSLTEGELFLNKNK 462
           L+  L +  + ++ + +SIG ++  +Y +  + KTI+   N +  L +L   +L+ +   
Sbjct: 579 LLRVLIISGVRIDELPDSIGNLKHLRYLDLTWNKTIKYLPNSLCKLINLQTLDLYRSDQL 638

Query: 461 IQHEDCFIAAKMLLQYFEIDAKIKKRPKS 375
           I+     +   + L+Y  + +K K+ P++
Sbjct: 639 IELPR-DVNKLISLRYLSLTSKQKQLPEA 666


>04_01_0603 - 7931162-7931446,7932217-7932718,7932824-7934925
          Length = 962

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 15/41 (36%), Positives = 27/41 (65%), Gaps = 3/41 (7%)
 Frame = +3

Query: 594 INHLQHNVANK*T--MYQAYRYFTGVNPPEDAEHI-QLETL 707
           +  L+H +A+K     +  +RYFTGV PP++  ++ +L+TL
Sbjct: 642 VRKLRHLLADKCADEKHSDFRYFTGVQPPKELSNLEELQTL 682


>06_03_0788 -
           24603849-24603949,24604030-24604123,24604206-24604413,
           24604727-24604839,24605679-24605816,24605916-24605999,
           24606517-24606675,24606754-24606837,24607505-24607840,
           24607941-24608042,24608970-24609153,24609699-24610044,
           24610444-24610591,24611053-24611203,24611786-24611867,
           24612314-24612362
          Length = 792

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 12/46 (26%), Positives = 25/46 (54%)
 Frame = -1

Query: 473 NKNKIQHEDCFIAAKMLLQYFEIDAKIKKRPKSNYHVNKIHKYAKF 336
           N+NK   E   +  +   QY E+D+ ++    + Y++N I +++ F
Sbjct: 350 NENKDNLEIPVVTYRKEGQYMEVDSSVQSEATAEYNLNAIKEFSPF 395


>01_06_1713 -
           39359558-39359590,39360000-39360074,39360437-39360662,
           39360792-39360880,39360960-39361053,39361134-39361318,
           39361415-39361582,39361682-39361822,39362327-39362545,
           39362628-39362744,39363154-39363248,39363662-39363743,
           39363864-39363926,39364157-39364216,39364312-39364476,
           39364574-39364759,39364890-39365180,39365262-39365405,
           39365492-39366172,39367045-39367362
          Length = 1143

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 16/56 (28%), Positives = 31/56 (55%)
 Frame = -1

Query: 611 MLEMIDESIGTIRGQKYYNEKYQKTIEEYKNRMIVLPSLTEGELFLNKNKIQHEDC 444
           +L M++E+ GT R  +   E   KT+E+ +N++  +  L + E+     K++ E C
Sbjct: 161 ILSMLEEAAGT-RMYEMKKEAALKTLEKKQNKVDEINKLLDEEILPALEKLRKERC 215


>11_01_0193 - 1534051-1534092,1536343-1537065
          Length = 254

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = -1

Query: 656 EVPIGLVHSLFVCYIMLEMIDESIGTIRGQ 567
           +V +G+VHS   CY   ++ D+++  +  Q
Sbjct: 110 QVKLGVVHSFLDCYARQQLFDDAVDLVLNQ 139


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,999,003
Number of Sequences: 37544
Number of extensions: 288994
Number of successful extensions: 646
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 635
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 646
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1886372480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)