Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_M24
         (777 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0014 + 113638-113754,113836-113950,114570-114835,115365-11...    33   0.19 
12_02_0496 + 19704429-19704613,19705874-19706736,19706764-197069...    28   7.2  
01_07_0254 + 42318181-42319471,42319581-42319792,42319909-423201...    28   7.2  
06_01_0555 + 3952502-3954262                                           28   9.5  

>03_01_0014 +
           113638-113754,113836-113950,114570-114835,115365-115575,
           115915-115979,118723-118930,119457-119566,119663-119913,
           120250-120356,120442-120509,120624-120701,121070-121198,
           121341-121481,122297-122344,122648-122743,124071-124183,
           124441-124591,124745-124818,124913-125072,125356-125454,
           125532-125618,125761-125907
          Length = 946

 Score = 33.5 bits (73), Expect = 0.19
 Identities = 13/23 (56%), Positives = 19/23 (82%)
 Frame = -1

Query: 600 FELLSRLREGRVPVNITCIILNY 532
           F+LL R +EGR+PV+I C+I N+
Sbjct: 763 FDLLYRWQEGRLPVDINCVISNH 785


>12_02_0496 +
           19704429-19704613,19705874-19706736,19706764-19706951,
           19707190-19708200
          Length = 748

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -2

Query: 674 CCVQNAILRHQFDTKNEIKPFKILISNYCR 585
           C VQ  +L+H+  +   I+PF  LI  +CR
Sbjct: 397 CLVQPVLLKHKQRSTRVIRPFFPLIFRWCR 426


>01_07_0254 +
           42318181-42319471,42319581-42319792,42319909-42320132,
           42320232-42321009
          Length = 834

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = -3

Query: 283 KTQPNNFHEQKKKIERQNKNYEKYQRISQNEL 188
           KTQ    H QK+K +  +++Y K +++ Q EL
Sbjct: 716 KTQEKE-HRQKRKADHASRDYNKRRKVLQREL 746


>06_01_0555 + 3952502-3954262
          Length = 586

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = +2

Query: 20  NSAAMHSSILXAQITKIMFGRCPYKXMGLNISILLTKHSSLL 145
           +SA   S +L   +T +M   CP+K M    +I + KH+ LL
Sbjct: 215 SSAEEASELLGRMVTGLMKELCPFKMMDNFPAIDVAKHAHLL 256


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,577,167
Number of Sequences: 37544
Number of extensions: 251112
Number of successful extensions: 417
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 413
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 417
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2080154268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)